Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 RN7SKP276-201ENST00000516242 268 ntBASIC4.42□□□□□ -1.7
TRIM13O60858 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TRIM13O60858 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRIM13O60858 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
TRIM13O60858 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TRIM13O60858 HSPE1P20-201ENST00000538133 289 ntBASIC4.42□□□□□ -1.7
TRIM13O60858 SETP7-201ENST00000552169 453 ntBASIC4.42□□□□□ -1.7
TRIM13O60858 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.42□□□□□ -1.7
TRIM13O60858 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.42□□□□□ -1.7
TRIM13O60858 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.42□□□□□ -1.7
TRIM13O60858 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.42□□□□□ -1.7
TRIM13O60858 RPL23AP97-201ENST00000568955 471 ntBASIC4.42□□□□□ -1.7
TRIM13O60858 AC090615.1-201ENST00000577519 154 ntBASIC4.42□□□□□ -1.7
TRIM13O60858 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.42□□□□□ -1.7
TRIM13O60858 AC024619.4-201ENST00000580924 316 ntBASIC4.42□□□□□ -1.7
TRIM13O60858 AL031320.1-201ENST00000604177 357 ntBASIC4.42□□□□□ -1.7
TRIM13O60858 MTND4LP5-201ENST00000605152 292 ntBASIC4.42□□□□□ -1.7
TRIM13O60858 HMGB1P50-201ENST00000605814 607 ntBASIC4.42□□□□□ -1.7
TRIM13O60858 AC025034.2-201ENST00000623264 286 ntBASIC4.42□□□□□ -1.7
TRIM13O60858 AC007546.2-201ENST00000623996 360 ntBASIC4.42□□□□□ -1.7
TRIM13O60858 BMS1P21-201ENST00000634565 365 ntBASIC4.42□□□□□ -1.7
TRIM13O60858 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC4.42□□□□□ -1.7
TRIM13O60858 AC132825.6-201ENST00000638861 357 ntBASIC4.42□□□□□ -1.7
TRIM13O60858 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
TRIM13O60858 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
TRIM13O60858 ZNF137P-201ENST00000456718 1920 ntBASIC4.42□□□□□ -1.7
TRIM13O60858 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
TRIM13O60858 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRIM13O60858 CPHL1P-201ENST00000461341 3407 ntBASIC4.42□□□□□ -1.7
TRIM13O60858 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.41□□□□□ -1.7
TRIM13O60858 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM13O60858 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM13O60858 RNA5SP52-201ENST00000362448 134 ntBASIC4.41□□□□□ -1.7
TRIM13O60858 Y_RNA.214-201ENST00000364201 112 ntBASIC4.41□□□□□ -1.7
TRIM13O60858 SNORD82-201ENST00000365530 70 ntBASIC4.41□□□□□ -1.7
TRIM13O60858 SNORD14.1-201ENST00000365609 90 ntBASIC4.41□□□□□ -1.7
TRIM13O60858 RNU6-128P-201ENST00000383976 107 ntBASIC4.41□□□□□ -1.7
TRIM13O60858 Y_RNA.462-201ENST00000384268 102 ntBASIC4.41□□□□□ -1.7
TRIM13O60858 AL583834.1-201ENST00000406943 343 ntBASIC4.41□□□□□ -1.7
TRIM13O60858 RNA5SP113-201ENST00000410486 84 ntBASIC4.41□□□□□ -1.7
TRIM13O60858 SNORA74C-2-201ENST00000411179 201 ntBASIC4.41□□□□□ -1.7
TRIM13O60858 AC011933.1-201ENST00000413334 321 ntBASIC4.41□□□□□ -1.7
TRIM13O60858 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.41□□□□□ -1.7
TRIM13O60858 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.41□□□□□ -1.7
TRIM13O60858 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.41□□□□□ -1.7
TRIM13O60858 RBMY1KP-201ENST00000423480 476 ntBASIC4.41□□□□□ -1.7
TRIM13O60858 AL132765.1-201ENST00000434165 553 ntBASIC4.41□□□□□ -1.7
TRIM13O60858 RPL36AP6-201ENST00000435770 321 ntBASIC4.41□□□□□ -1.7
TRIM13O60858 RPL12P46-201ENST00000436610 195 ntBASIC4.41□□□□□ -1.7
TRIM13O60858 FTH1P25-201ENST00000447665 469 ntBASIC4.41□□□□□ -1.7
TRIM13O60858 RPS15AP27-201ENST00000449183 343 ntBASIC4.41□□□□□ -1.7
TRIM13O60858 AC012671.1-201ENST00000451912 203 ntBASIC4.41□□□□□ -1.7
TRIM13O60858 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.41□□□□□ -1.7
TRIM13O60858 SNORD5.1-201ENST00000458800 75 ntBASIC4.41□□□□□ -1.7
TRIM13O60858 snoU13.8-201ENST00000458890 104 ntBASIC4.41□□□□□ -1.7
TRIM13O60858 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.41□□□□□ -1.7
TRIM13O60858 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.41□□□□□ -1.7
TRIM13O60858 RPSAP50-201ENST00000481955 852 ntBASIC4.41□□□□□ -1.7
TRIM13O60858 IGLV2-34-201ENST00000490007 283 ntBASIC4.41□□□□□ -1.7
TRIM13O60858 HMGB1P35-201ENST00000503360 598 ntBASIC4.41□□□□□ -1.7
TRIM13O60858 AC016065.2-201ENST00000514530 444 ntBASIC4.41□□□□□ -1.7
TRIM13O60858 RN7SKP82-201ENST00000516786 223 ntBASIC4.41□□□□□ -1.7
TRIM13O60858 RNA5SP34-201ENST00000516887 130 ntBASIC4.41□□□□□ -1.7
TRIM13O60858 RN7SKP92-201ENST00000517266 244 ntBASIC4.41□□□□□ -1.7
TRIM13O60858 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.41□□□□□ -1.7
TRIM13O60858 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.41□□□□□ -1.7
TRIM13O60858 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.41□□□□□ -1.7
TRIM13O60858 MIR4512-201ENST00000583257 77 ntBASIC4.41□□□□□ -1.7
TRIM13O60858 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.41□□□□□ -1.7
TRIM13O60858 AC007566.2-201ENST00000603642 413 ntBASIC4.41□□□□□ -1.7
TRIM13O60858 AC009779.6-201ENST00000603972 165 ntBASIC4.41□□□□□ -1.7
TRIM13O60858 SDR42E1P2-201ENST00000614861 481 ntBASIC4.41□□□□□ -1.7
TRIM13O60858 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.41□□□□□ -1.7
TRIM13O60858 SDR42E1P4-201ENST00000620894 481 ntBASIC4.41□□□□□ -1.7
TRIM13O60858 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
TRIM13O60858 AL138713.1-201ENST00000624026 2130 ntBASIC4.41□□□□□ -1.7
TRIM13O60858 TPTE2P4-201ENST00000258589 1605 ntBASIC4.41□□□□□ -1.7
TRIM13O60858 AC093535.2-201ENST00000624769 2326 ntBASIC4.41□□□□□ -1.7
TRIM13O60858 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM13O60858 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
TRIM13O60858 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.41□□□□□ -1.7
TRIM13O60858 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TRIM13O60858 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.4□□□□□ -1.7
TRIM13O60858 SAGE2P-201ENST00000420011 2126 ntBASIC4.4□□□□□ -1.7
TRIM13O60858 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.4□□□□□ -1.7
TRIM13O60858 AC125257.1-201ENST00000560400 2930 ntBASIC4.4□□□□□ -1.7
TRIM13O60858 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
TRIM13O60858 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
TRIM13O60858 RNA5SP258-201ENST00000362750 119 ntBASIC4.4□□□□□ -1.71
TRIM13O60858 RNU6-1287P-201ENST00000362914 107 ntBASIC4.4□□□□□ -1.71
TRIM13O60858 SNORA71.2-201ENST00000364941 134 ntBASIC4.4□□□□□ -1.71
TRIM13O60858 RNU6-61P-201ENST00000365528 109 ntBASIC4.4□□□□□ -1.71
TRIM13O60858 RNU6-1060P-201ENST00000384664 107 ntBASIC4.4□□□□□ -1.71
TRIM13O60858 Y_RNA.576-201ENST00000384781 102 ntBASIC4.4□□□□□ -1.71
TRIM13O60858 RN7SKP213-201ENST00000410746 298 ntBASIC4.4□□□□□ -1.71
TRIM13O60858 AL160275.2-201ENST00000412010 394 ntBASIC4.4□□□□□ -1.71
TRIM13O60858 Z99755.1-201ENST00000414048 380 ntBASIC4.4□□□□□ -1.71
TRIM13O60858 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
TRIM13O60858 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.4□□□□□ -1.71
TRIM13O60858 BX510359.2-201ENST00000417920 305 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms