Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
SSSCA1O60232 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
SSSCA1O60232 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.18□□□□□ -2.22
SSSCA1O60232 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
SSSCA1O60232 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.18□□□□□ -2.22
SSSCA1O60232 SNORA51.12-201ENST00000384448 134 ntBASIC1.18□□□□□ -2.22
SSSCA1O60232 RNU6-1035P-201ENST00000384477 107 ntBASIC1.18□□□□□ -2.22
SSSCA1O60232 MIR504-201ENST00000385065 83 ntBASIC1.18□□□□□ -2.22
SSSCA1O60232 AL627390.1-201ENST00000396055 340 ntBASIC1.18□□□□□ -2.22
SSSCA1O60232 RNU6-1140P-201ENST00000410517 106 ntBASIC1.18□□□□□ -2.22
SSSCA1O60232 RN7SKP51-201ENST00000410781 304 ntBASIC1.18□□□□□ -2.22
SSSCA1O60232 AL133384.1-201ENST00000412744 351 ntBASIC1.18□□□□□ -2.22
SSSCA1O60232 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.18□□□□□ -2.22
SSSCA1O60232 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC1.18□□□□□ -2.22
SSSCA1O60232 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.18□□□□□ -2.22
SSSCA1O60232 OFD1P13Y-201ENST00000431179 1232 ntBASIC1.18□□□□□ -2.22
SSSCA1O60232 AC016691.1-201ENST00000441321 413 ntBASIC1.18□□□□□ -2.22
SSSCA1O60232 AC004865.1-201ENST00000442276 1003 ntBASIC1.18□□□□□ -2.22
SSSCA1O60232 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.18□□□□□ -2.22
SSSCA1O60232 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC1.18□□□□□ -2.22
SSSCA1O60232 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.18□□□□□ -2.22
SSSCA1O60232 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC1.18□□□□□ -2.22
SSSCA1O60232 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC1.18□□□□□ -2.22
SSSCA1O60232 HMGB1P1-201ENST00000522557 636 ntBASIC1.18□□□□□ -2.22
SSSCA1O60232 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC1.18□□□□□ -2.22
SSSCA1O60232 AC024224.1-201ENST00000538284 609 ntBASIC1.18□□□□□ -2.22
SSSCA1O60232 ARL2BPP2-201ENST00000550907 489 ntBASIC1.18□□□□□ -2.22
SSSCA1O60232 LINC00933-203ENST00000559812 219 ntBASIC1.18□□□□□ -2.22
SSSCA1O60232 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC1.18□□□□□ -2.22
SSSCA1O60232 MIR4435-1-201ENST00000582552 80 ntBASIC1.18□□□□□ -2.22
SSSCA1O60232 MTCO3P22-201ENST00000603219 784 ntBASIC1.18□□□□□ -2.22
SSSCA1O60232 AC007038.2-201ENST00000608095 740 ntBASIC1.18□□□□□ -2.22
SSSCA1O60232 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.18□□□□□ -2.22
SSSCA1O60232 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC1.18□□□□□ -2.22
SSSCA1O60232 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
SSSCA1O60232 AC010329.5-201ENST00000623497 2174 ntBASIC1.18□□□□□ -2.22
SSSCA1O60232 AC111188.2-201ENST00000529697 1387 ntBASIC1.18□□□□□ -2.22
SSSCA1O60232 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
SSSCA1O60232 AC099548.1-201ENST00000421443 426 ntBASIC1.17□□□□□ -2.22
SSSCA1O60232 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC1.17□□□□□ -2.22
SSSCA1O60232 AL513185.2-201ENST00000425543 193 ntBASIC1.17□□□□□ -2.22
SSSCA1O60232 ARL5AP3-201ENST00000439327 386 ntBASIC1.17□□□□□ -2.22
SSSCA1O60232 DNAJC19P4-201ENST00000440115 345 ntBASIC1.17□□□□□ -2.22
SSSCA1O60232 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC1.17□□□□□ -2.22
SSSCA1O60232 MRPL35P4-201ENST00000453682 566 ntBASIC1.17□□□□□ -2.22
SSSCA1O60232 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.17□□□□□ -2.22
SSSCA1O60232 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.17□□□□□ -2.22
SSSCA1O60232 MIR4648-201ENST00000580107 72 ntBASIC1.17□□□□□ -2.22
SSSCA1O60232 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.17□□□□□ -2.22
SSSCA1O60232 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
SSSCA1O60232 AL773524.1-201ENST00000614065 229 ntBASIC1.17□□□□□ -2.22
SSSCA1O60232 AC040168.1-201ENST00000623594 991 ntBASIC1.17□□□□□ -2.22
SSSCA1O60232 AC068057.2-201ENST00000624047 895 ntBASIC1.17□□□□□ -2.22
SSSCA1O60232 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.17□□□□□ -2.22
SSSCA1O60232 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC1.17□□□□□ -2.22
SSSCA1O60232 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
SSSCA1O60232 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.17□□□□□ -2.22
SSSCA1O60232 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
SSSCA1O60232 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.16□□□□□ -2.22
SSSCA1O60232 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
SSSCA1O60232 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
SSSCA1O60232 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
SSSCA1O60232 Y_RNA.510-201ENST00000384511 114 ntBASIC1.16□□□□□ -2.22
SSSCA1O60232 MIR517C-201ENST00000385103 95 ntBASIC1.16□□□□□ -2.22
SSSCA1O60232 UBE2V1P2-201ENST00000397758 440 ntBASIC1.16□□□□□ -2.22
SSSCA1O60232 AL589655.1-201ENST00000405398 482 ntBASIC1.16□□□□□ -2.22
SSSCA1O60232 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
SSSCA1O60232 AL354695.1-201ENST00000427935 228 ntBASIC1.16□□□□□ -2.22
SSSCA1O60232 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.16□□□□□ -2.22
SSSCA1O60232 GTF2IP7-202ENST00000436677 309 ntBASIC1.16□□□□□ -2.22
SSSCA1O60232 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.16□□□□□ -2.22
SSSCA1O60232 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC1.16□□□□□ -2.22
SSSCA1O60232 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.16□□□□□ -2.22
SSSCA1O60232 AC068587.2-201ENST00000478386 781 ntBASIC1.16□□□□□ -2.22
SSSCA1O60232 RNU5F-8P-201ENST00000515941 111 ntBASIC1.16□□□□□ -2.22
SSSCA1O60232 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.16□□□□□ -2.22
SSSCA1O60232 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.16□□□□□ -2.22
SSSCA1O60232 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC1.16□□□□□ -2.22
SSSCA1O60232 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.16□□□□□ -2.22
SSSCA1O60232 AL160236.1-201ENST00000556317 195 ntBASIC1.16□□□□□ -2.22
SSSCA1O60232 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.16□□□□□ -2.22
SSSCA1O60232 MIR3199-1-201ENST00000582434 88 ntBASIC1.16□□□□□ -2.22
SSSCA1O60232 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC1.16□□□□□ -2.22
SSSCA1O60232 AC009318.2-201ENST00000610917 651 ntBASIC1.16□□□□□ -2.22
SSSCA1O60232 AC010678.1-201ENST00000614118 713 ntBASIC1.16□□□□□ -2.22
SSSCA1O60232 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.16□□□□□ -2.22
SSSCA1O60232 AC025048.6-202ENST00000627667 438 ntBASIC1.16□□□□□ -2.22
SSSCA1O60232 OR5H6-203ENST00000642105 978 ntBASIC1.16□□□□□ -2.22
SSSCA1O60232 AC025263.3-201ENST00000622965 1396 ntBASIC1.16□□□□□ -2.22
SSSCA1O60232 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
SSSCA1O60232 AC010385.1-201ENST00000412374 256 ntBASIC1.15□□□□□ -2.23
SSSCA1O60232 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.15□□□□□ -2.23
SSSCA1O60232 AL358453.1-201ENST00000422522 250 ntBASIC1.15□□□□□ -2.23
SSSCA1O60232 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.15□□□□□ -2.23
SSSCA1O60232 SNRPGP13-201ENST00000442212 177 ntBASIC1.15□□□□□ -2.23
SSSCA1O60232 AL357134.1-201ENST00000445848 426 ntBASIC1.15□□□□□ -2.23
SSSCA1O60232 AC114982.2-201ENST00000461396 358 ntBASIC1.15□□□□□ -2.23
SSSCA1O60232 AL049714.1-201ENST00000466686 347 ntBASIC1.15□□□□□ -2.23
SSSCA1O60232 MTCYBP35-201ENST00000503630 1137 ntBASIC1.15□□□□□ -2.23
SSSCA1O60232 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms