Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 RNU1-104P-201ENST00000517280 175 ntBASIC2.47□□□□□ -2.01
CHMP2AO43633 AC025881.1-201ENST00000518851 512 ntBASIC2.47□□□□□ -2.01
CHMP2AO43633 AC087808.1-201ENST00000520501 361 ntBASIC2.47□□□□□ -2.01
CHMP2AO43633 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC2.47□□□□□ -2.01
CHMP2AO43633 NDUFS5P6-201ENST00000529136 295 ntBASIC2.47□□□□□ -2.01
CHMP2AO43633 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.47□□□□□ -2.01
CHMP2AO43633 AC124947.2-202ENST00000552735 133 ntBASIC2.47□□□□□ -2.01
CHMP2AO43633 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.47□□□□□ -2.01
CHMP2AO43633 MIR1273D-201ENST00000577266 86 ntBASIC2.47□□□□□ -2.01
CHMP2AO43633 MIR5708-201ENST00000579723 85 ntBASIC2.47□□□□□ -2.01
CHMP2AO43633 LRRC37A5P-203ENST00000580181 585 ntBASIC2.47□□□□□ -2.01
CHMP2AO43633 MIR3945-201ENST00000581853 98 ntBASIC2.47□□□□□ -2.01
CHMP2AO43633 AL022067.1-201ENST00000602426 454 ntBASIC2.47□□□□□ -2.01
CHMP2AO43633 HMGB1P24-202ENST00000615653 685 ntBASIC2.47□□□□□ -2.01
CHMP2AO43633 AC084824.4-201ENST00000620106 731 ntBASIC2.47□□□□□ -2.01
CHMP2AO43633 AP003399.1-201ENST00000637534 361 ntBASIC2.47□□□□□ -2.01
CHMP2AO43633 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CHMP2AO43633 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
CHMP2AO43633 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CHMP2AO43633 ZNF271P-202ENST00000465539 1970 ntBASIC2.47□□□□□ -2.01
CHMP2AO43633 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.46□□□□□ -2.01
CHMP2AO43633 AC007785.2-201ENST00000598627 1916 ntBASIC2.46□□□□□ -2.02
CHMP2AO43633 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CHMP2AO43633 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.46□□□□□ -2.02
CHMP2AO43633 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.46□□□□□ -2.02
CHMP2AO43633 RPL21P132-201ENST00000331267 462 ntBASIC2.46□□□□□ -2.02
CHMP2AO43633 SNORA11.4-201ENST00000408823 129 ntBASIC2.46□□□□□ -2.02
CHMP2AO43633 RN7SKP32-201ENST00000410167 303 ntBASIC2.46□□□□□ -2.02
CHMP2AO43633 AL161449.1-201ENST00000414531 1199 ntBASIC2.46□□□□□ -2.02
CHMP2AO43633 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.46□□□□□ -2.02
CHMP2AO43633 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.46□□□□□ -2.02
CHMP2AO43633 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.46□□□□□ -2.02
CHMP2AO43633 SEPT7P5-201ENST00000434048 306 ntBASIC2.46□□□□□ -2.02
CHMP2AO43633 AC096638.1-201ENST00000444678 216 ntBASIC2.46□□□□□ -2.02
CHMP2AO43633 BMI1P1-201ENST00000445879 941 ntBASIC2.46□□□□□ -2.02
CHMP2AO43633 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.46□□□□□ -2.02
CHMP2AO43633 AC079776.3-201ENST00000450665 370 ntBASIC2.46□□□□□ -2.02
CHMP2AO43633 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC2.46□□□□□ -2.02
CHMP2AO43633 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.46□□□□□ -2.02
CHMP2AO43633 RPL9P6-201ENST00000492764 598 ntBASIC2.46□□□□□ -2.02
CHMP2AO43633 RPS29P21-201ENST00000496272 170 ntBASIC2.46□□□□□ -2.02
CHMP2AO43633 AC135721.1-201ENST00000497954 479 ntBASIC2.46□□□□□ -2.02
CHMP2AO43633 AC026414.1-201ENST00000504046 698 ntBASIC2.46□□□□□ -2.02
CHMP2AO43633 SUMO2P5-201ENST00000506790 245 ntBASIC2.46□□□□□ -2.02
CHMP2AO43633 AC093752.1-206ENST00000511823 336 ntBASIC2.46□□□□□ -2.02
CHMP2AO43633 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.46□□□□□ -2.02
CHMP2AO43633 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CHMP2AO43633 RNU1-41P-201ENST00000516161 162 ntBASIC2.46□□□□□ -2.02
CHMP2AO43633 SNORA19.3-201ENST00000516165 130 ntBASIC2.46□□□□□ -2.02
CHMP2AO43633 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.46□□□□□ -2.02
CHMP2AO43633 RNU1-48P-201ENST00000516400 162 ntBASIC2.46□□□□□ -2.02
CHMP2AO43633 AP000889.2-201ENST00000532684 490 ntBASIC2.46□□□□□ -2.02
CHMP2AO43633 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.46□□□□□ -2.02
CHMP2AO43633 AC026464.5-201ENST00000562497 722 ntBASIC2.46□□□□□ -2.02
CHMP2AO43633 HMGN2P15-201ENST00000585707 270 ntBASIC2.46□□□□□ -2.02
CHMP2AO43633 VN1R87P-201ENST00000596706 487 ntBASIC2.46□□□□□ -2.02
CHMP2AO43633 AP001429.1-201ENST00000602568 530 ntBASIC2.46□□□□□ -2.02
CHMP2AO43633 AC068620.3-201ENST00000602749 560 ntBASIC2.46□□□□□ -2.02
CHMP2AO43633 AC253576.2-201ENST00000618815 580 ntBASIC2.46□□□□□ -2.02
CHMP2AO43633 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.46□□□□□ -2.02
CHMP2AO43633 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CHMP2AO43633 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CHMP2AO43633 AC005832.2-201ENST00000538921 1430 ntBASIC2.45□□□□□ -2.02
CHMP2AO43633 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
CHMP2AO43633 AL139276.1-201ENST00000311910 1001 ntBASIC2.45□□□□□ -2.02
CHMP2AO43633 Y_RNA.548-201ENST00000384656 105 ntBASIC2.45□□□□□ -2.02
CHMP2AO43633 SNORA64-201ENST00000384674 134 ntBASIC2.45□□□□□ -2.02
CHMP2AO43633 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC2.45□□□□□ -2.02
CHMP2AO43633 RPS7P9-201ENST00000414704 586 ntBASIC2.45□□□□□ -2.02
CHMP2AO43633 DPH3P2-201ENST00000422618 250 ntBASIC2.45□□□□□ -2.02
CHMP2AO43633 AC098614.2-201ENST00000426040 255 ntBASIC2.45□□□□□ -2.02
CHMP2AO43633 SUMO1P4-201ENST00000429430 302 ntBASIC2.45□□□□□ -2.02
CHMP2AO43633 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC2.45□□□□□ -2.02
CHMP2AO43633 RPL39P6-201ENST00000448289 150 ntBASIC2.45□□□□□ -2.02
CHMP2AO43633 OFD1P3Y-201ENST00000453312 783 ntBASIC2.45□□□□□ -2.02
CHMP2AO43633 AC026410.2-201ENST00000460281 156 ntBASIC2.45□□□□□ -2.02
CHMP2AO43633 AC073901.1-201ENST00000462471 408 ntBASIC2.45□□□□□ -2.02
CHMP2AO43633 RPS15AP17-201ENST00000470598 390 ntBASIC2.45□□□□□ -2.02
CHMP2AO43633 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CHMP2AO43633 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CHMP2AO43633 AC008837.1-201ENST00000511513 412 ntBASIC2.45□□□□□ -2.02
CHMP2AO43633 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CHMP2AO43633 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.45□□□□□ -2.02
CHMP2AO43633 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.45□□□□□ -2.02
CHMP2AO43633 AC104417.1-201ENST00000523974 751 ntBASIC2.45□□□□□ -2.02
CHMP2AO43633 SNRPGP18-201ENST00000553000 214 ntBASIC2.45□□□□□ -2.02
CHMP2AO43633 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.45□□□□□ -2.02
CHMP2AO43633 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.45□□□□□ -2.02
CHMP2AO43633 AC087241.4-201ENST00000612441 480 ntBASIC2.45□□□□□ -2.02
CHMP2AO43633 AC008759.3-201ENST00000613300 508 ntBASIC2.45□□□□□ -2.02
CHMP2AO43633 AC010975.3-201ENST00000618727 978 ntBASIC2.45□□□□□ -2.02
CHMP2AO43633 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.45□□□□□ -2.02
CHMP2AO43633 AC009831.4-201ENST00000620744 325 ntBASIC2.45□□□□□ -2.02
CHMP2AO43633 MIR6132-201ENST00000622083 109 ntBASIC2.45□□□□□ -2.02
CHMP2AO43633 AC004944.1-201ENST00000517807 3059 ntBASIC2.45□□□□□ -2.02
CHMP2AO43633 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
CHMP2AO43633 SNORA67.3-201ENST00000384366 140 ntBASIC2.44□□□□□ -2.02
CHMP2AO43633 RPL7P27-201ENST00000403775 720 ntBASIC2.44□□□□□ -2.02
CHMP2AO43633 AL023284.1-201ENST00000403956 276 ntBASIC2.44□□□□□ -2.02
CHMP2AO43633 RNU2-42P-201ENST00000410697 113 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 139 ms