Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 BX842559.1-201ENST00000419615 532 ntBASIC3.25□□□□□ -1.89
SMAD9O15198 AL451054.2-201ENST00000420896 202 ntBASIC3.25□□□□□ -1.89
SMAD9O15198 FCF1P1-201ENST00000432690 571 ntBASIC3.25□□□□□ -1.89
SMAD9O15198 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.25□□□□□ -1.89
SMAD9O15198 MTATP6P30-201ENST00000443540 664 ntBASIC3.25□□□□□ -1.89
SMAD9O15198 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.25□□□□□ -1.89
SMAD9O15198 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.25□□□□□ -1.89
SMAD9O15198 SNRPGP6-201ENST00000451124 220 ntBASIC3.25□□□□□ -1.89
SMAD9O15198 SNORD97-201ENST00000459187 142 ntBASIC3.25□□□□□ -1.89
SMAD9O15198 RNU7-51P-201ENST00000516560 62 ntBASIC3.25□□□□□ -1.89
SMAD9O15198 NRON-201ENST00000517270 370 ntBASIC3.25□□□□□ -1.89
SMAD9O15198 MTCO2P4-201ENST00000517968 247 ntBASIC3.25□□□□□ -1.89
SMAD9O15198 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.25□□□□□ -1.89
SMAD9O15198 RANP9-201ENST00000519957 271 ntBASIC3.25□□□□□ -1.89
SMAD9O15198 AC124947.2-202ENST00000552735 133 ntBASIC3.25□□□□□ -1.89
SMAD9O15198 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.25□□□□□ -1.89
SMAD9O15198 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.25□□□□□ -1.89
SMAD9O15198 MIR3167-201ENST00000579623 85 ntBASIC3.25□□□□□ -1.89
SMAD9O15198 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.25□□□□□ -1.89
SMAD9O15198 SRGNP1-201ENST00000603392 451 ntBASIC3.25□□□□□ -1.89
SMAD9O15198 AC005332.10-201ENST00000612725 619 ntBASIC3.25□□□□□ -1.89
SMAD9O15198 AC090132.2-201ENST00000615881 347 ntBASIC3.25□□□□□ -1.89
SMAD9O15198 AC002076.2-201ENST00000617362 122 ntBASIC3.25□□□□□ -1.89
SMAD9O15198 AL034408.1-202ENST00000636088 415 ntBASIC3.25□□□□□ -1.89
SMAD9O15198 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SMAD9O15198 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
SMAD9O15198 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.25□□□□□ -1.89
SMAD9O15198 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SMAD9O15198 AL021368.2-201ENST00000606125 5352 ntBASIC3.25□□□□□ -1.89
SMAD9O15198 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SMAD9O15198 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.24□□□□□ -1.89
SMAD9O15198 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
SMAD9O15198 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
SMAD9O15198 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.24□□□□□ -1.89
SMAD9O15198 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
SMAD9O15198 AC103988.1-201ENST00000566382 2177 ntBASIC3.24□□□□□ -1.89
SMAD9O15198 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
SMAD9O15198 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SMAD9O15198 SNORD9-201ENST00000362566 104 ntBASIC3.24□□□□□ -1.89
SMAD9O15198 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.24□□□□□ -1.89
SMAD9O15198 RNU5A-6P-201ENST00000384136 116 ntBASIC3.24□□□□□ -1.89
SMAD9O15198 RNU6-1197P-201ENST00000391183 107 ntBASIC3.24□□□□□ -1.89
SMAD9O15198 NDUFS5P1-201ENST00000405668 289 ntBASIC3.24□□□□□ -1.89
SMAD9O15198 AL513331.1-201ENST00000411908 397 ntBASIC3.24□□□□□ -1.89
SMAD9O15198 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.24□□□□□ -1.89
SMAD9O15198 SYF2P2-201ENST00000417620 583 ntBASIC3.24□□□□□ -1.89
SMAD9O15198 RAC1P6-201ENST00000423911 575 ntBASIC3.24□□□□□ -1.89
SMAD9O15198 AC091286.1-201ENST00000431233 461 ntBASIC3.24□□□□□ -1.89
SMAD9O15198 AL358934.1-201ENST00000432346 324 ntBASIC3.24□□□□□ -1.89
SMAD9O15198 AC092573.2-201ENST00000434546 243 ntBASIC3.24□□□□□ -1.89
SMAD9O15198 NDUFB4P6-201ENST00000436819 366 ntBASIC3.24□□□□□ -1.89
SMAD9O15198 RPS24P1-201ENST00000438550 371 ntBASIC3.24□□□□□ -1.89
SMAD9O15198 RPS29P31-201ENST00000446147 164 ntBASIC3.24□□□□□ -1.89
SMAD9O15198 AC020550.1-201ENST00000447385 163 ntBASIC3.24□□□□□ -1.89
SMAD9O15198 HMGB3P8-201ENST00000449709 577 ntBASIC3.24□□□□□ -1.89
SMAD9O15198 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.24□□□□□ -1.89
SMAD9O15198 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.24□□□□□ -1.89
SMAD9O15198 TPTE2P5-203ENST00000458118 728 ntBASIC3.24□□□□□ -1.89
SMAD9O15198 AC004801.2-202ENST00000463559 283 ntBASIC3.24□□□□□ -1.89
SMAD9O15198 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.24□□□□□ -1.89
SMAD9O15198 AC138853.1-201ENST00000503549 823 ntBASIC3.24□□□□□ -1.89
SMAD9O15198 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.24□□□□□ -1.89
SMAD9O15198 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.24□□□□□ -1.89
SMAD9O15198 RN7SKP18-201ENST00000516005 275 ntBASIC3.24□□□□□ -1.89
SMAD9O15198 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
SMAD9O15198 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.24□□□□□ -1.89
SMAD9O15198 AC004024.1-201ENST00000549244 247 ntBASIC3.24□□□□□ -1.89
SMAD9O15198 RPL21P12-201ENST00000559810 515 ntBASIC3.24□□□□□ -1.89
SMAD9O15198 AL391840.1-201ENST00000571144 367 ntBASIC3.24□□□□□ -1.89
SMAD9O15198 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.24□□□□□ -1.89
SMAD9O15198 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.24□□□□□ -1.89
SMAD9O15198 KLKP1-201ENST00000595979 403 ntBASIC3.24□□□□□ -1.89
SMAD9O15198 AC068790.2-201ENST00000602601 557 ntBASIC3.24□□□□□ -1.89
SMAD9O15198 DPPA3P3-201ENST00000603842 430 ntBASIC3.24□□□□□ -1.89
SMAD9O15198 AL161756.2-201ENST00000604597 246 ntBASIC3.24□□□□□ -1.89
SMAD9O15198 NDUFA8P1-201ENST00000605525 367 ntBASIC3.24□□□□□ -1.89
SMAD9O15198 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.24□□□□□ -1.89
SMAD9O15198 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.24□□□□□ -1.89
SMAD9O15198 AC068880.5-201ENST00000624331 290 ntBASIC3.24□□□□□ -1.89
SMAD9O15198 LRRC77P-213ENST00000637727 880 ntBASIC3.24□□□□□ -1.89
SMAD9O15198 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.24□□□□□ -1.89
SMAD9O15198 AC009093.8-201ENST00000641769 292 ntBASIC3.24□□□□□ -1.89
SMAD9O15198 AC007496.3-201ENST00000624987 3443 ntBASIC3.24□□□□□ -1.89
SMAD9O15198 AC007823.1-201ENST00000569932 1566 ntBASIC3.24□□□□□ -1.89
SMAD9O15198 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
SMAD9O15198 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SMAD9O15198 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SMAD9O15198 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
SMAD9O15198 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
SMAD9O15198 MAPK10-322ENST00000641485 4530 ntBASIC3.23□□□□□ -1.89
SMAD9O15198 HSPE1P11-201ENST00000339579 310 ntBASIC3.23□□□□□ -1.89
SMAD9O15198 RNU6-701P-201ENST00000384059 107 ntBASIC3.23□□□□□ -1.89
SMAD9O15198 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
SMAD9O15198 FAT1P1-201ENST00000406588 507 ntBASIC3.23□□□□□ -1.89
SMAD9O15198 RNU2-66P-201ENST00000410650 161 ntBASIC3.23□□□□□ -1.89
SMAD9O15198 MTND3P17-201ENST00000416968 344 ntBASIC3.23□□□□□ -1.89
SMAD9O15198 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.23□□□□□ -1.89
SMAD9O15198 PIGFP2-201ENST00000421400 651 ntBASIC3.23□□□□□ -1.89
SMAD9O15198 TMEM167AP1-201ENST00000423409 219 ntBASIC3.23□□□□□ -1.89
SMAD9O15198 AC002075.2-201ENST00000425207 252 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms