Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 AC006338.1-201ENST00000618453 749 ntBASIC3.21□□□□□ -1.9
TO15178 AP003122.6-201ENST00000623831 495 ntBASIC3.21□□□□□ -1.9
TO15178 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.21□□□□□ -1.9
TO15178 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.21□□□□□ -1.9
TO15178 AL392088.2-201ENST00000637607 285 ntBASIC3.21□□□□□ -1.9
TO15178 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TO15178 MTND5P27-201ENST00000428871 1720 ntBASIC3.21□□□□□ -1.9
TO15178 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.21□□□□□ -1.9
TO15178 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.21□□□□□ -1.9
TO15178 AC058791.1-201ENST00000608412 3198 ntBASIC3.2□□□□□ -1.9
TO15178 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TO15178 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.2□□□□□ -1.9
TO15178 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
TO15178 U3.11-201ENST00000364476 212 ntBASIC3.2□□□□□ -1.9
TO15178 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
TO15178 CD24P4-201ENST00000382840 243 ntBASIC3.2□□□□□ -1.9
TO15178 RNU1-39P-201ENST00000383897 165 ntBASIC3.2□□□□□ -1.9
TO15178 RNU6-348P-201ENST00000384386 107 ntBASIC3.2□□□□□ -1.9
TO15178 MIR514A1-201ENST00000385133 98 ntBASIC3.2□□□□□ -1.9
TO15178 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.2□□□□□ -1.9
TO15178 AL663109.1-201ENST00000411498 844 ntBASIC3.2□□□□□ -1.9
TO15178 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.2□□□□□ -1.9
TO15178 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.2□□□□□ -1.9
TO15178 USP9YP15-201ENST00000442391 422 ntBASIC3.2□□□□□ -1.9
TO15178 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.2□□□□□ -1.9
TO15178 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.2□□□□□ -1.9
TO15178 AC091179.1-201ENST00000461606 579 ntBASIC3.2□□□□□ -1.9
TO15178 RPL21P129-201ENST00000491732 478 ntBASIC3.2□□□□□ -1.9
TO15178 FCF1P3-201ENST00000496394 590 ntBASIC3.2□□□□□ -1.9
TO15178 PCBP2P3-201ENST00000509726 843 ntBASIC3.2□□□□□ -1.9
TO15178 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.2□□□□□ -1.9
TO15178 RNU2-10P-201ENST00000516375 211 ntBASIC3.2□□□□□ -1.9
TO15178 SCARNA15.2-201ENST00000516409 127 ntBASIC3.2□□□□□ -1.9
TO15178 SNORA70.19-201ENST00000516717 90 ntBASIC3.2□□□□□ -1.9
TO15178 NDUFB9P3-201ENST00000521269 501 ntBASIC3.2□□□□□ -1.9
TO15178 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.2□□□□□ -1.9
TO15178 AC128657.1-201ENST00000549459 145 ntBASIC3.2□□□□□ -1.9
TO15178 MIR4528-201ENST00000577763 90 ntBASIC3.2□□□□□ -1.9
TO15178 AC015871.2-201ENST00000603605 948 ntBASIC3.2□□□□□ -1.9
TO15178 U3.45-201ENST00000607547 219 ntBASIC3.2□□□□□ -1.9
TO15178 AL451064.1-201ENST00000607718 471 ntBASIC3.2□□□□□ -1.9
TO15178 AC006566.1-201ENST00000608943 513 ntBASIC3.2□□□□□ -1.9
TO15178 AP000254.1-201ENST00000609934 520 ntBASIC3.2□□□□□ -1.9
TO15178 AC004696.1-201ENST00000614345 607 ntBASIC3.2□□□□□ -1.9
TO15178 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.2□□□□□ -1.9
TO15178 FRG1KP-201ENST00000623592 341 ntBASIC3.2□□□□□ -1.9
TO15178 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TO15178 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TO15178 AC032011.1-201ENST00000611703 1549 ntBASIC3.19□□□□□ -1.9
TO15178 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
TO15178 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.19□□□□□ -1.9
TO15178 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TO15178 RNU5E-1-201ENST00000362477 120 ntBASIC3.19□□□□□ -1.9
TO15178 RNA5SP119-201ENST00000362715 117 ntBASIC3.19□□□□□ -1.9
TO15178 RNU4-1-201ENST00000363925 141 ntBASIC3.19□□□□□ -1.9
TO15178 RNY1P12-201ENST00000364251 105 ntBASIC3.19□□□□□ -1.9
TO15178 Y_RNA.359-201ENST00000365498 102 ntBASIC3.19□□□□□ -1.9
TO15178 RNU6-805P-201ENST00000365643 106 ntBASIC3.19□□□□□ -1.9
TO15178 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TO15178 RNU6-1027P-201ENST00000383998 107 ntBASIC3.19□□□□□ -1.9
TO15178 RNU6-1119P-201ENST00000384349 108 ntBASIC3.19□□□□□ -1.9
TO15178 SNORD17-201ENST00000390930 237 ntBASIC3.19□□□□□ -1.9
TO15178 DEFB108C-201ENST00000400154 252 ntBASIC3.19□□□□□ -1.9
TO15178 AL136116.1-201ENST00000403591 381 ntBASIC3.19□□□□□ -1.9
TO15178 AC127391.1-201ENST00000411737 98 ntBASIC3.19□□□□□ -1.9
TO15178 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.19□□□□□ -1.9
TO15178 C1DP2-201ENST00000418167 426 ntBASIC3.19□□□□□ -1.9
TO15178 NDUFB4P7-201ENST00000423198 363 ntBASIC3.19□□□□□ -1.9
TO15178 ISCA1P6-201ENST00000427740 390 ntBASIC3.19□□□□□ -1.9
TO15178 AP000907.1-201ENST00000428428 510 ntBASIC3.19□□□□□ -1.9
TO15178 VN1R108P-201ENST00000431580 830 ntBASIC3.19□□□□□ -1.9
TO15178 HMGN2P31-201ENST00000432430 273 ntBASIC3.19□□□□□ -1.9
TO15178 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.19□□□□□ -1.9
TO15178 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.19□□□□□ -1.9
TO15178 ARPC3P1-201ENST00000437218 533 ntBASIC3.19□□□□□ -1.9
TO15178 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.19□□□□□ -1.9
TO15178 AL136380.1-201ENST00000447970 162 ntBASIC3.19□□□□□ -1.9
TO15178 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.19□□□□□ -1.9
TO15178 RPL31P60-201ENST00000478450 367 ntBASIC3.19□□□□□ -1.9
TO15178 RNA5SP337-201ENST00000517007 109 ntBASIC3.19□□□□□ -1.9
TO15178 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.19□□□□□ -1.9
TO15178 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.19□□□□□ -1.9
TO15178 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.19□□□□□ -1.9
TO15178 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.19□□□□□ -1.9
TO15178 MIR4444-1-201ENST00000581696 74 ntBASIC3.19□□□□□ -1.9
TO15178 AC103987.3-201ENST00000582071 292 ntBASIC3.19□□□□□ -1.9
TO15178 MIR4444-2-201ENST00000584390 74 ntBASIC3.19□□□□□ -1.9
TO15178 MIR3922-201ENST00000585192 84 ntBASIC3.19□□□□□ -1.9
TO15178 AC006557.5-201ENST00000603126 811 ntBASIC3.19□□□□□ -1.9
TO15178 AP000860.1-201ENST00000605250 559 ntBASIC3.19□□□□□ -1.9
TO15178 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.19□□□□□ -1.9
TO15178 AL133173.2-201ENST00000614270 90 ntBASIC3.19□□□□□ -1.9
TO15178 AC072046.2-201ENST00000618366 268 ntBASIC3.19□□□□□ -1.9
TO15178 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.19□□□□□ -1.9
TO15178 AC110801.1-201ENST00000623590 212 ntBASIC3.19□□□□□ -1.9
TO15178 AC004777.1-201ENST00000624317 287 ntBASIC3.19□□□□□ -1.9
TO15178 AC068137.4-201ENST00000638485 296 ntBASIC3.19□□□□□ -1.9
TO15178 OR4G2P-202ENST00000641004 1759 ntBASIC3.19□□□□□ -1.9
TO15178 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TO15178 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms