Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PDLIM1O00151 AC010733.2-201ENST00000589496 5702 ntBASIC2.79□□□□□ -1.96
PDLIM1O00151 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.79□□□□□ -1.96
PDLIM1O00151 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
PDLIM1O00151 AC073325.2-201ENST00000339545 159 ntBASIC2.79□□□□□ -1.96
PDLIM1O00151 RNU6-660P-201ENST00000364566 109 ntBASIC2.79□□□□□ -1.96
PDLIM1O00151 RNA5SP252-201ENST00000391131 119 ntBASIC2.79□□□□□ -1.96
PDLIM1O00151 RNU6-1197P-201ENST00000391183 107 ntBASIC2.79□□□□□ -1.96
PDLIM1O00151 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC2.79□□□□□ -1.96
PDLIM1O00151 AL353678.1-201ENST00000422735 741 ntBASIC2.79□□□□□ -1.96
PDLIM1O00151 AL593851.1-201ENST00000426171 157 ntBASIC2.79□□□□□ -1.96
PDLIM1O00151 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.79□□□□□ -1.96
PDLIM1O00151 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.79□□□□□ -1.96
PDLIM1O00151 RPL35AP22-201ENST00000436855 335 ntBASIC2.79□□□□□ -1.96
PDLIM1O00151 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.79□□□□□ -1.96
PDLIM1O00151 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.79□□□□□ -1.96
PDLIM1O00151 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.79□□□□□ -1.96
PDLIM1O00151 AC135721.1-201ENST00000497954 479 ntBASIC2.79□□□□□ -1.96
PDLIM1O00151 OR2A20P-203ENST00000498397 1268 ntBASIC2.79□□□□□ -1.96
PDLIM1O00151 MTCYBP35-201ENST00000503630 1137 ntBASIC2.79□□□□□ -1.96
PDLIM1O00151 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.79□□□□□ -1.96
PDLIM1O00151 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.79□□□□□ -1.96
PDLIM1O00151 RNA5SP402-201ENST00000517148 110 ntBASIC2.79□□□□□ -1.96
PDLIM1O00151 RN7SKP57-201ENST00000517248 293 ntBASIC2.79□□□□□ -1.96
PDLIM1O00151 MTATP6P15-201ENST00000527233 835 ntBASIC2.79□□□□□ -1.96
PDLIM1O00151 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PDLIM1O00151 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.79□□□□□ -1.96
PDLIM1O00151 AC002400.1-201ENST00000569310 726 ntBASIC2.79□□□□□ -1.96
PDLIM1O00151 AC026422.1-201ENST00000623961 452 ntBASIC2.79□□□□□ -1.96
PDLIM1O00151 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC2.79□□□□□ -1.96
PDLIM1O00151 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.79□□□□□ -1.96
PDLIM1O00151 MIR4275-201ENST00000636486 87 ntBASIC2.79□□□□□ -1.96
PDLIM1O00151 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.79□□□□□ -1.96
PDLIM1O00151 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
PDLIM1O00151 AC138915.1-201ENST00000565427 1685 ntBASIC2.79□□□□□ -1.96
PDLIM1O00151 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PDLIM1O00151 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
PDLIM1O00151 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.78□□□□□ -1.96
PDLIM1O00151 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.78□□□□□ -1.96
PDLIM1O00151 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
PDLIM1O00151 SNORA23-201ENST00000365128 182 ntBASIC2.78□□□□□ -1.96
PDLIM1O00151 RNU6-754P-201ENST00000391166 107 ntBASIC2.78□□□□□ -1.96
PDLIM1O00151 RNU2-25P-201ENST00000411041 191 ntBASIC2.78□□□□□ -1.96
PDLIM1O00151 UBE2FP1-201ENST00000416536 447 ntBASIC2.78□□□□□ -1.96
PDLIM1O00151 AC005005.2-201ENST00000420779 380 ntBASIC2.78□□□□□ -1.96
PDLIM1O00151 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.78□□□□□ -1.96
PDLIM1O00151 MTND5P25-201ENST00000430499 799 ntBASIC2.78□□□□□ -1.96
PDLIM1O00151 NDUFB4P6-201ENST00000436819 366 ntBASIC2.78□□□□□ -1.96
PDLIM1O00151 RPS3AP12-201ENST00000443616 753 ntBASIC2.78□□□□□ -1.96
PDLIM1O00151 RPL7P36-201ENST00000444633 681 ntBASIC2.78□□□□□ -1.96
PDLIM1O00151 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.78□□□□□ -1.96
PDLIM1O00151 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.78□□□□□ -1.96
PDLIM1O00151 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.78□□□□□ -1.96
PDLIM1O00151 ATG12P2-201ENST00000456830 416 ntBASIC2.78□□□□□ -1.96
PDLIM1O00151 AP1S2P1-201ENST00000457344 379 ntBASIC2.78□□□□□ -1.96
PDLIM1O00151 RPS3AP43-201ENST00000479743 781 ntBASIC2.78□□□□□ -1.96
PDLIM1O00151 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.78□□□□□ -1.96
PDLIM1O00151 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.78□□□□□ -1.96
PDLIM1O00151 RNA5SP367-201ENST00000516557 118 ntBASIC2.78□□□□□ -1.96
PDLIM1O00151 Y_RNA.717-201ENST00000517106 92 ntBASIC2.78□□□□□ -1.96
PDLIM1O00151 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.78□□□□□ -1.96
PDLIM1O00151 AP002404.1-201ENST00000532005 451 ntBASIC2.78□□□□□ -1.96
PDLIM1O00151 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
PDLIM1O00151 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
PDLIM1O00151 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.78□□□□□ -1.96
PDLIM1O00151 AC012435.1-202ENST00000568772 240 ntBASIC2.78□□□□□ -1.96
PDLIM1O00151 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.78□□□□□ -1.96
PDLIM1O00151 AC060766.3-201ENST00000591442 263 ntBASIC2.78□□□□□ -1.96
PDLIM1O00151 RPL23AP78-201ENST00000599928 470 ntBASIC2.78□□□□□ -1.96
PDLIM1O00151 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
PDLIM1O00151 AC091304.6-201ENST00000619761 202 ntBASIC2.78□□□□□ -1.96
PDLIM1O00151 AC112204.3-201ENST00000623822 332 ntBASIC2.78□□□□□ -1.96
PDLIM1O00151 MIR622-201ENST00000638396 96 ntBASIC2.78□□□□□ -1.96
PDLIM1O00151 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
PDLIM1O00151 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
PDLIM1O00151 MAPK10-322ENST00000641485 4530 ntBASIC2.78□□□□□ -1.96
PDLIM1O00151 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
PDLIM1O00151 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.77□□□□□ -1.97
PDLIM1O00151 AC131280.1-202ENST00000624067 4211 ntBASIC2.77□□□□□ -1.97
PDLIM1O00151 AC091564.4-201ENST00000533934 2194 ntBASIC2.77□□□□□ -1.97
PDLIM1O00151 OR4G2P-202ENST00000641004 1759 ntBASIC2.77□□□□□ -1.97
PDLIM1O00151 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.77□□□□□ -1.97
PDLIM1O00151 RNA5SP374-201ENST00000362939 125 ntBASIC2.77□□□□□ -1.97
PDLIM1O00151 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.77□□□□□ -1.97
PDLIM1O00151 SNORA36C-201ENST00000384289 132 ntBASIC2.77□□□□□ -1.97
PDLIM1O00151 RNU6-769P-201ENST00000384407 104 ntBASIC2.77□□□□□ -1.97
PDLIM1O00151 MIR514A1-201ENST00000385133 98 ntBASIC2.77□□□□□ -1.97
PDLIM1O00151 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
PDLIM1O00151 SNORA11.1-201ENST00000408133 129 ntBASIC2.77□□□□□ -1.97
PDLIM1O00151 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.77□□□□□ -1.97
PDLIM1O00151 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.77□□□□□ -1.97
PDLIM1O00151 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.77□□□□□ -1.97
PDLIM1O00151 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.77□□□□□ -1.97
PDLIM1O00151 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.77□□□□□ -1.97
PDLIM1O00151 AL590383.1-201ENST00000428602 75 ntBASIC2.77□□□□□ -1.97
PDLIM1O00151 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.77□□□□□ -1.97
PDLIM1O00151 TPT1P14-201ENST00000448018 505 ntBASIC2.77□□□□□ -1.97
PDLIM1O00151 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.77□□□□□ -1.97
PDLIM1O00151 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.77□□□□□ -1.97
PDLIM1O00151 AC006445.1-201ENST00000491925 405 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 156.5 ms