Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AL031775.1-201ENST00000607014 887 ntBASIC2.57□□□□□ -2
TRIM49D1C9J1S8 AL391813.2-201ENST00000609113 322 ntBASIC2.57□□□□□ -2
TRIM49D1C9J1S8 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
TRIM49D1C9J1S8 CUL1P1-201ENST00000509510 2425 ntBASIC2.57□□□□□ -2
TRIM49D1C9J1S8 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.56□□□□□ -2
TRIM49D1C9J1S8 FRG1BP-201ENST00000278882 761 ntBASIC2.56□□□□□ -2
TRIM49D1C9J1S8 AL672167.1-206ENST00000356293 943 ntBASIC2.56□□□□□ -2
TRIM49D1C9J1S8 RNU4-40P-201ENST00000364351 143 ntBASIC2.56□□□□□ -2
TRIM49D1C9J1S8 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.56□□□□□ -2
TRIM49D1C9J1S8 SNORD116-1-201ENST00000384335 95 ntBASIC2.56□□□□□ -2
TRIM49D1C9J1S8 RNY3P9-201ENST00000384727 106 ntBASIC2.56□□□□□ -2
TRIM49D1C9J1S8 SNORA26.8-201ENST00000391306 124 ntBASIC2.56□□□□□ -2
TRIM49D1C9J1S8 AL031679.1-201ENST00000400616 525 ntBASIC2.56□□□□□ -2
TRIM49D1C9J1S8 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.56□□□□□ -2
TRIM49D1C9J1S8 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.56□□□□□ -2
TRIM49D1C9J1S8 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC2.56□□□□□ -2
TRIM49D1C9J1S8 AL365203.2-201ENST00000423444 196 ntBASIC2.56□□□□□ -2
TRIM49D1C9J1S8 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.56□□□□□ -2
TRIM49D1C9J1S8 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.56□□□□□ -2
TRIM49D1C9J1S8 AC109583.1-201ENST00000432156 268 ntBASIC2.56□□□□□ -2
TRIM49D1C9J1S8 AC118469.1-201ENST00000442943 488 ntBASIC2.56□□□□□ -2
TRIM49D1C9J1S8 AP000542.1-201ENST00000448473 371 ntBASIC2.56□□□□□ -2
TRIM49D1C9J1S8 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.56□□□□□ -2
TRIM49D1C9J1S8 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.56□□□□□ -2
TRIM49D1C9J1S8 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.56□□□□□ -2
TRIM49D1C9J1S8 AC034159.1-201ENST00000513885 583 ntBASIC2.56□□□□□ -2
TRIM49D1C9J1S8 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.56□□□□□ -2
TRIM49D1C9J1S8 SNORA31.1-201ENST00000515993 133 ntBASIC2.56□□□□□ -2
TRIM49D1C9J1S8 SNORA31.5-201ENST00000516190 133 ntBASIC2.56□□□□□ -2
TRIM49D1C9J1S8 AC025881.1-201ENST00000518851 512 ntBASIC2.56□□□□□ -2
TRIM49D1C9J1S8 COX6CP8-201ENST00000522620 226 ntBASIC2.56□□□□□ -2
TRIM49D1C9J1S8 AC128657.1-201ENST00000549459 145 ntBASIC2.56□□□□□ -2
TRIM49D1C9J1S8 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.56□□□□□ -2
TRIM49D1C9J1S8 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.56□□□□□ -2
TRIM49D1C9J1S8 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.56□□□□□ -2
TRIM49D1C9J1S8 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.56□□□□□ -2
TRIM49D1C9J1S8 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.56□□□□□ -2
TRIM49D1C9J1S8 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.56□□□□□ -2
TRIM49D1C9J1S8 MIR544B-201ENST00000582372 78 ntBASIC2.56□□□□□ -2
TRIM49D1C9J1S8 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.56□□□□□ -2
TRIM49D1C9J1S8 UBE2L4-201ENST00000587688 464 ntBASIC2.56□□□□□ -2
TRIM49D1C9J1S8 AP001029.3-201ENST00000588063 596 ntBASIC2.56□□□□□ -2
TRIM49D1C9J1S8 AC106028.5-201ENST00000610332 395 ntBASIC2.56□□□□□ -2
TRIM49D1C9J1S8 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.56□□□□□ -2
TRIM49D1C9J1S8 AL158801.5-201ENST00000623123 465 ntBASIC2.56□□□□□ -2
TRIM49D1C9J1S8 AC091931.1-201ENST00000623488 728 ntBASIC2.56□□□□□ -2
TRIM49D1C9J1S8 AC090617.7-201ENST00000623952 126 ntBASIC2.56□□□□□ -2
TRIM49D1C9J1S8 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.56□□□□□ -2
TRIM49D1C9J1S8 AC099063.3-201ENST00000642066 185 ntBASIC2.56□□□□□ -2
TRIM49D1C9J1S8 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
TRIM49D1C9J1S8 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.56□□□□□ -2
TRIM49D1C9J1S8 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.55□□□□□ -2
TRIM49D1C9J1S8 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
TRIM49D1C9J1S8 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
TRIM49D1C9J1S8 RNA5SP258-201ENST00000362750 119 ntBASIC2.55□□□□□ -2
TRIM49D1C9J1S8 RNU5F-6P-201ENST00000362979 116 ntBASIC2.55□□□□□ -2
TRIM49D1C9J1S8 Y_RNA.234-201ENST00000364409 97 ntBASIC2.55□□□□□ -2
TRIM49D1C9J1S8 SNORA14A-201ENST00000364773 135 ntBASIC2.55□□□□□ -2
TRIM49D1C9J1S8 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
TRIM49D1C9J1S8 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.55□□□□□ -2
TRIM49D1C9J1S8 HMGB1P17-201ENST00000403495 628 ntBASIC2.55□□□□□ -2
TRIM49D1C9J1S8 AC080125.1-201ENST00000414888 684 ntBASIC2.55□□□□□ -2
TRIM49D1C9J1S8 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.55□□□□□ -2
TRIM49D1C9J1S8 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.55□□□□□ -2
TRIM49D1C9J1S8 USP9YP36-201ENST00000424581 829 ntBASIC2.55□□□□□ -2
TRIM49D1C9J1S8 MTATP6P4-201ENST00000427725 675 ntBASIC2.55□□□□□ -2
TRIM49D1C9J1S8 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.55□□□□□ -2
TRIM49D1C9J1S8 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.55□□□□□ -2
TRIM49D1C9J1S8 VN1R108P-201ENST00000431580 830 ntBASIC2.55□□□□□ -2
TRIM49D1C9J1S8 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.55□□□□□ -2
TRIM49D1C9J1S8 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.55□□□□□ -2
TRIM49D1C9J1S8 THAP5P1-201ENST00000439089 262 ntBASIC2.55□□□□□ -2
TRIM49D1C9J1S8 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.55□□□□□ -2
TRIM49D1C9J1S8 TAF9P1-201ENST00000445421 515 ntBASIC2.55□□□□□ -2
TRIM49D1C9J1S8 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.55□□□□□ -2
TRIM49D1C9J1S8 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.55□□□□□ -2
TRIM49D1C9J1S8 AL353691.1-201ENST00000451332 387 ntBASIC2.55□□□□□ -2
TRIM49D1C9J1S8 TAF9P2-201ENST00000454958 515 ntBASIC2.55□□□□□ -2
TRIM49D1C9J1S8 AC027673.1-201ENST00000456245 405 ntBASIC2.55□□□□□ -2
TRIM49D1C9J1S8 snoU13.4-201ENST00000458916 104 ntBASIC2.55□□□□□ -2
TRIM49D1C9J1S8 RPS23P3-201ENST00000470993 430 ntBASIC2.55□□□□□ -2
TRIM49D1C9J1S8 RPS3AP14-201ENST00000483907 780 ntBASIC2.55□□□□□ -2
TRIM49D1C9J1S8 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.55□□□□□ -2
TRIM49D1C9J1S8 AC017037.2-201ENST00000513850 890 ntBASIC2.55□□□□□ -2
TRIM49D1C9J1S8 AC117532.1-201ENST00000514638 323 ntBASIC2.55□□□□□ -2
TRIM49D1C9J1S8 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.55□□□□□ -2
TRIM49D1C9J1S8 Y_RNA.688-201ENST00000516565 95 ntBASIC2.55□□□□□ -2
TRIM49D1C9J1S8 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.55□□□□□ -2
TRIM49D1C9J1S8 AC022861.1-201ENST00000522981 663 ntBASIC2.55□□□□□ -2
TRIM49D1C9J1S8 AP003385.6-201ENST00000531603 374 ntBASIC2.55□□□□□ -2
TRIM49D1C9J1S8 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.55□□□□□ -2
TRIM49D1C9J1S8 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.55□□□□□ -2
TRIM49D1C9J1S8 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.55□□□□□ -2
TRIM49D1C9J1S8 AC087481.2-201ENST00000565492 330 ntBASIC2.55□□□□□ -2
TRIM49D1C9J1S8 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.55□□□□□ -2
TRIM49D1C9J1S8 AC136618.2-201ENST00000575091 400 ntBASIC2.55□□□□□ -2
TRIM49D1C9J1S8 OR4K8P-201ENST00000578842 1048 ntBASIC2.55□□□□□ -2
TRIM49D1C9J1S8 Z94722.1-201ENST00000604328 474 ntBASIC2.55□□□□□ -2
TRIM49D1C9J1S8 AC121247.2-201ENST00000604776 136 ntBASIC2.55□□□□□ -2
TRIM49D1C9J1S8 AC008962.1-201ENST00000605729 304 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms