Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 RPL21P109-201ENST00000422213 475 ntBASIC6.05□□□□□ -1.44
GTF3C3Q9Y5Q9 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.05□□□□□ -1.44
GTF3C3Q9Y5Q9 AC098614.2-201ENST00000426040 255 ntBASIC6.05□□□□□ -1.44
GTF3C3Q9Y5Q9 AC007560.1-201ENST00000426912 237 ntBASIC6.05□□□□□ -1.44
GTF3C3Q9Y5Q9 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC6.05□□□□□ -1.44
GTF3C3Q9Y5Q9 HMGB1P18-201ENST00000438801 619 ntBASIC6.05□□□□□ -1.44
GTF3C3Q9Y5Q9 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC6.05□□□□□ -1.44
GTF3C3Q9Y5Q9 MTATP6P7-201ENST00000453315 681 ntBASIC6.05□□□□□ -1.44
GTF3C3Q9Y5Q9 CEACAMP4-201ENST00000457676 421 ntBASIC6.05□□□□□ -1.44
GTF3C3Q9Y5Q9 AC098818.1-201ENST00000478593 252 ntBASIC6.05□□□□□ -1.44
GTF3C3Q9Y5Q9 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC6.05□□□□□ -1.44
GTF3C3Q9Y5Q9 AC139453.3-201ENST00000493276 369 ntBASIC6.05□□□□□ -1.44
GTF3C3Q9Y5Q9 AC103851.1-201ENST00000506833 274 ntBASIC6.05□□□□□ -1.44
GTF3C3Q9Y5Q9 AC018797.1-201ENST00000510791 255 ntBASIC6.05□□□□□ -1.44
GTF3C3Q9Y5Q9 RNU6-572P-201ENST00000516724 80 ntBASIC6.05□□□□□ -1.44
GTF3C3Q9Y5Q9 AC009902.1-201ENST00000519351 183 ntBASIC6.05□□□□□ -1.44
GTF3C3Q9Y5Q9 RNU6-323P-201ENST00000521915 107 ntBASIC6.05□□□□□ -1.44
GTF3C3Q9Y5Q9 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC6.05□□□□□ -1.44
GTF3C3Q9Y5Q9 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC6.05□□□□□ -1.44
GTF3C3Q9Y5Q9 AC021646.1-201ENST00000605469 484 ntBASIC6.05□□□□□ -1.44
GTF3C3Q9Y5Q9 AC008962.1-201ENST00000605729 304 ntBASIC6.05□□□□□ -1.44
GTF3C3Q9Y5Q9 AC009233.1-201ENST00000616477 371 ntBASIC6.05□□□□□ -1.44
GTF3C3Q9Y5Q9 AC005858.4-201ENST00000623191 700 ntBASIC6.05□□□□□ -1.44
GTF3C3Q9Y5Q9 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC6.05□□□□□ -1.44
GTF3C3Q9Y5Q9 U6.99-201ENST00000637524 83 ntBASIC6.05□□□□□ -1.44
GTF3C3Q9Y5Q9 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
GTF3C3Q9Y5Q9 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC6.05□□□□□ -1.44
GTF3C3Q9Y5Q9 AL136164.4-201ENST00000625013 2135 ntBASIC6.05□□□□□ -1.44
GTF3C3Q9Y5Q9 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC6.05□□□□□ -1.44
GTF3C3Q9Y5Q9 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC6.05□□□□□ -1.44
GTF3C3Q9Y5Q9 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC6.05□□□□□ -1.44
GTF3C3Q9Y5Q9 SPATA31D2P-201ENST00000429999 4388 ntBASIC6.04□□□□□ -1.44
GTF3C3Q9Y5Q9 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
GTF3C3Q9Y5Q9 Y_RNA.212-201ENST00000364177 102 ntBASIC6.04□□□□□ -1.44
GTF3C3Q9Y5Q9 Y_RNA.324-201ENST00000365165 102 ntBASIC6.04□□□□□ -1.44
GTF3C3Q9Y5Q9 SNORA40C-201ENST00000391285 128 ntBASIC6.04□□□□□ -1.44
GTF3C3Q9Y5Q9 AL022722.2-201ENST00000402519 180 ntBASIC6.04□□□□□ -1.44
GTF3C3Q9Y5Q9 VN1R36P-201ENST00000414936 291 ntBASIC6.04□□□□□ -1.44
GTF3C3Q9Y5Q9 MYL8P-204ENST00000431574 518 ntBASIC6.04□□□□□ -1.44
GTF3C3Q9Y5Q9 AL078601.1-201ENST00000444542 271 ntBASIC6.04□□□□□ -1.44
GTF3C3Q9Y5Q9 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.04□□□□□ -1.44
GTF3C3Q9Y5Q9 RPL37P4-201ENST00000448908 268 ntBASIC6.04□□□□□ -1.44
GTF3C3Q9Y5Q9 RPL12P25-201ENST00000455592 494 ntBASIC6.04□□□□□ -1.44
GTF3C3Q9Y5Q9 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC6.04□□□□□ -1.44
GTF3C3Q9Y5Q9 SNORA31.19-201ENST00000517079 126 ntBASIC6.04□□□□□ -1.44
GTF3C3Q9Y5Q9 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
GTF3C3Q9Y5Q9 NACAP3-201ENST00000552100 481 ntBASIC6.04□□□□□ -1.44
GTF3C3Q9Y5Q9 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC6.04□□□□□ -1.44
GTF3C3Q9Y5Q9 MIR4782-201ENST00000577987 79 ntBASIC6.04□□□□□ -1.44
GTF3C3Q9Y5Q9 MIR5692C1-201ENST00000585309 91 ntBASIC6.04□□□□□ -1.44
GTF3C3Q9Y5Q9 AL117336.2-201ENST00000602435 335 ntBASIC6.04□□□□□ -1.44
GTF3C3Q9Y5Q9 AC069307.1-201ENST00000602820 447 ntBASIC6.04□□□□□ -1.44
GTF3C3Q9Y5Q9 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC6.04□□□□□ -1.44
GTF3C3Q9Y5Q9 uc_338.15-201ENST00000615470 191 ntBASIC6.04□□□□□ -1.44
GTF3C3Q9Y5Q9 RMST_7.1-201ENST00000621935 268 ntBASIC6.04□□□□□ -1.44
GTF3C3Q9Y5Q9 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC6.04□□□□□ -1.44
GTF3C3Q9Y5Q9 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC6.04□□□□□ -1.44
GTF3C3Q9Y5Q9 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC6.04□□□□□ -1.44
GTF3C3Q9Y5Q9 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
GTF3C3Q9Y5Q9 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC6.03□□□□□ -1.44
GTF3C3Q9Y5Q9 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC6.03□□□□□ -1.44
GTF3C3Q9Y5Q9 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
GTF3C3Q9Y5Q9 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
GTF3C3Q9Y5Q9 RNA5SP319-201ENST00000362768 119 ntBASIC6.03□□□□□ -1.44
GTF3C3Q9Y5Q9 Y_RNA.301-201ENST00000364990 103 ntBASIC6.03□□□□□ -1.44
GTF3C3Q9Y5Q9 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
GTF3C3Q9Y5Q9 RNU6-214P-201ENST00000384130 107 ntBASIC6.03□□□□□ -1.44
GTF3C3Q9Y5Q9 RPL26P27-201ENST00000414397 437 ntBASIC6.03□□□□□ -1.44
GTF3C3Q9Y5Q9 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC6.03□□□□□ -1.44
GTF3C3Q9Y5Q9 AL139396.1-201ENST00000421137 167 ntBASIC6.03□□□□□ -1.44
GTF3C3Q9Y5Q9 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC6.03□□□□□ -1.44
GTF3C3Q9Y5Q9 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC6.03□□□□□ -1.44
GTF3C3Q9Y5Q9 PSMD10P3-201ENST00000437000 448 ntBASIC6.03□□□□□ -1.44
GTF3C3Q9Y5Q9 RPL34P20-201ENST00000442771 351 ntBASIC6.03□□□□□ -1.44
GTF3C3Q9Y5Q9 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC6.03□□□□□ -1.44
GTF3C3Q9Y5Q9 AL162151.2-201ENST00000448875 158 ntBASIC6.03□□□□□ -1.44
GTF3C3Q9Y5Q9 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC6.03□□□□□ -1.44
GTF3C3Q9Y5Q9 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC6.03□□□□□ -1.44
GTF3C3Q9Y5Q9 RNU7-138P-201ENST00000459479 64 ntBASIC6.03□□□□□ -1.44
GTF3C3Q9Y5Q9 AL592156.1-201ENST00000508758 304 ntBASIC6.03□□□□□ -1.44
GTF3C3Q9Y5Q9 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC6.03□□□□□ -1.44
GTF3C3Q9Y5Q9 SNORA25.17-201ENST00000517184 124 ntBASIC6.03□□□□□ -1.44
GTF3C3Q9Y5Q9 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC6.03□□□□□ -1.44
GTF3C3Q9Y5Q9 TVP23CP2-201ENST00000571473 623 ntBASIC6.03□□□□□ -1.44
GTF3C3Q9Y5Q9 AC138207.8-204ENST00000579588 527 ntBASIC6.03□□□□□ -1.44
GTF3C3Q9Y5Q9 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
GTF3C3Q9Y5Q9 AC087045.1-201ENST00000605856 382 ntBASIC6.03□□□□□ -1.44
GTF3C3Q9Y5Q9 AC002044.1-201ENST00000606707 158 ntBASIC6.03□□□□□ -1.44
GTF3C3Q9Y5Q9 AC005344.1-201ENST00000613391 459 ntBASIC6.03□□□□□ -1.44
GTF3C3Q9Y5Q9 ATP5A1P2-202ENST00000616464 443 ntBASIC6.03□□□□□ -1.44
GTF3C3Q9Y5Q9 AC068831.7-201ENST00000616954 363 ntBASIC6.03□□□□□ -1.44
GTF3C3Q9Y5Q9 HSPA8P1-201ENST00000425843 1833 ntBASIC6.03□□□□□ -1.44
GTF3C3Q9Y5Q9 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
GTF3C3Q9Y5Q9 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
GTF3C3Q9Y5Q9 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
GTF3C3Q9Y5Q9 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
GTF3C3Q9Y5Q9 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
GTF3C3Q9Y5Q9 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC6.03□□□□□ -1.44
GTF3C3Q9Y5Q9 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.44
GTF3C3Q9Y5Q9 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms