Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.56□□□□□ -1.68
CTDP1Q9Y5B0 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.56□□□□□ -1.68
CTDP1Q9Y5B0 AC008638.3-201ENST00000603341 463 ntBASIC4.56□□□□□ -1.68
CTDP1Q9Y5B0 PART1_1.1-201ENST00000611761 217 ntBASIC4.56□□□□□ -1.68
CTDP1Q9Y5B0 AC093913.1-201ENST00000614178 329 ntBASIC4.56□□□□□ -1.68
CTDP1Q9Y5B0 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
CTDP1Q9Y5B0 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.56□□□□□ -1.68
CTDP1Q9Y5B0 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CTDP1Q9Y5B0 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CTDP1Q9Y5B0 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.56□□□□□ -1.68
CTDP1Q9Y5B0 AC006020.1-201ENST00000420179 1854 ntBASIC4.56□□□□□ -1.68
CTDP1Q9Y5B0 AC009902.3-201ENST00000606235 2172 ntBASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 Y_RNA.58-201ENST00000362807 102 ntBASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 Y_RNA.154-201ENST00000363624 102 ntBASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 RNA5SP399-201ENST00000364003 117 ntBASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 Y_RNA.255-201ENST00000364581 97 ntBASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 RNY3P1-201ENST00000365085 102 ntBASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 RNY3-201ENST00000365484 102 ntBASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 Y_RNA.490-201ENST00000384413 102 ntBASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 RNU6-332P-201ENST00000391193 108 ntBASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 RN7SKP32-201ENST00000410167 303 ntBASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 AF228730.4-201ENST00000421457 183 ntBASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 AL353678.1-201ENST00000422735 741 ntBASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 TIMM9P1-201ENST00000436122 256 ntBASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 DDX3P2-201ENST00000446138 111 ntBASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 MRPL50P4-201ENST00000446432 475 ntBASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 AL500522.2-201ENST00000448562 343 ntBASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 AL356010.1-201ENST00000456364 102 ntBASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 RPS4XP10-201ENST00000465034 731 ntBASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 AC006512.1-201ENST00000468816 291 ntBASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 SNRPGP3-201ENST00000469405 227 ntBASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 RN7SL585P-201ENST00000470538 280 ntBASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 RPS26P28-201ENST00000470806 348 ntBASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 AC006517.1-201ENST00000480485 328 ntBASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 EIF4EP3-201ENST00000498782 656 ntBASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 AC026427.2-201ENST00000506228 536 ntBASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 HMGN1P11-201ENST00000508668 303 ntBASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 RNU7-30P-201ENST00000516835 62 ntBASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 IGLV3-26-201ENST00000520756 302 ntBASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 HPRT1P3-201ENST00000539521 576 ntBASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 CYP4A43P-201ENST00000568156 121 ntBASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 AC008739.3-201ENST00000603262 127 ntBASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 uc_338.5-201ENST00000611839 155 ntBASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 uc_338.12-201ENST00000616344 181 ntBASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 AC009248.2-201ENST00000619826 254 ntBASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 RMST_7.1-201ENST00000621935 268 ntBASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 AL160413.1-201ENST00000622780 310 ntBASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
CTDP1Q9Y5B0 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.54□□□□□ -1.68
CTDP1Q9Y5B0 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CTDP1Q9Y5B0 OR4G1P-203ENST00000641984 1631 ntBASIC4.54□□□□□ -1.68
CTDP1Q9Y5B0 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CTDP1Q9Y5B0 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CTDP1Q9Y5B0 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CTDP1Q9Y5B0 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CTDP1Q9Y5B0 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CTDP1Q9Y5B0 RNU6-335P-201ENST00000364563 113 ntBASIC4.54□□□□□ -1.68
CTDP1Q9Y5B0 RNU6-996P-201ENST00000365438 107 ntBASIC4.54□□□□□ -1.68
CTDP1Q9Y5B0 RNY3P13-201ENST00000365542 102 ntBASIC4.54□□□□□ -1.68
CTDP1Q9Y5B0 RHOT1P2-201ENST00000366423 333 ntBASIC4.54□□□□□ -1.68
CTDP1Q9Y5B0 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CTDP1Q9Y5B0 SNORA32.2-201ENST00000384049 122 ntBASIC4.54□□□□□ -1.68
CTDP1Q9Y5B0 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CTDP1Q9Y5B0 RNA5SP171-201ENST00000391071 115 ntBASIC4.54□□□□□ -1.68
CTDP1Q9Y5B0 RNU6-510P-201ENST00000391239 108 ntBASIC4.54□□□□□ -1.68
CTDP1Q9Y5B0 AL136116.1-201ENST00000403591 381 ntBASIC4.54□□□□□ -1.68
CTDP1Q9Y5B0 SNORA3C-201ENST00000408792 125 ntBASIC4.54□□□□□ -1.68
CTDP1Q9Y5B0 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.54□□□□□ -1.68
CTDP1Q9Y5B0 AL139247.1-201ENST00000422768 325 ntBASIC4.54□□□□□ -1.68
CTDP1Q9Y5B0 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.54□□□□□ -1.68
CTDP1Q9Y5B0 MTCO3P46-201ENST00000425787 232 ntBASIC4.54□□□□□ -1.68
CTDP1Q9Y5B0 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CTDP1Q9Y5B0 RANP8-201ENST00000444720 713 ntBASIC4.54□□□□□ -1.68
CTDP1Q9Y5B0 AC104308.1-201ENST00000454621 333 ntBASIC4.54□□□□□ -1.68
CTDP1Q9Y5B0 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.54□□□□□ -1.68
CTDP1Q9Y5B0 RPL21P104-201ENST00000464143 478 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 138.1 ms