Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.93□□□□□ -2.1
HDGFL3Q9Y3E1 RNU7-26P-201ENST00000458980 63 ntBASIC1.93□□□□□ -2.1
HDGFL3Q9Y3E1 AC078857.1-201ENST00000469870 667 ntBASIC1.93□□□□□ -2.1
HDGFL3Q9Y3E1 SUMO2P6-201ENST00000505273 288 ntBASIC1.93□□□□□ -2.1
HDGFL3Q9Y3E1 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.93□□□□□ -2.1
HDGFL3Q9Y3E1 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC1.93□□□□□ -2.1
HDGFL3Q9Y3E1 AP002748.2-201ENST00000528671 348 ntBASIC1.93□□□□□ -2.1
HDGFL3Q9Y3E1 AC124947.2-202ENST00000552735 133 ntBASIC1.93□□□□□ -2.1
HDGFL3Q9Y3E1 ZNF971P-201ENST00000562068 1249 ntBASIC1.93□□□□□ -2.1
HDGFL3Q9Y3E1 LINC00557-201ENST00000563184 1279 ntBASIC1.93□□□□□ -2.1
HDGFL3Q9Y3E1 AC023824.2-201ENST00000566185 400 ntBASIC1.93□□□□□ -2.1
HDGFL3Q9Y3E1 MIR4789-201ENST00000577469 82 ntBASIC1.93□□□□□ -2.1
HDGFL3Q9Y3E1 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC1.93□□□□□ -2.1
HDGFL3Q9Y3E1 RPAP2P1-201ENST00000603626 1168 ntBASIC1.93□□□□□ -2.1
HDGFL3Q9Y3E1 AL355877.2-201ENST00000603670 358 ntBASIC1.93□□□□□ -2.1
HDGFL3Q9Y3E1 AC135507.1-201ENST00000607214 561 ntBASIC1.93□□□□□ -2.1
HDGFL3Q9Y3E1 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.93□□□□□ -2.1
HDGFL3Q9Y3E1 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
HDGFL3Q9Y3E1 CCT4P2-201ENST00000233836 1548 ntBASIC1.92□□□□□ -2.1
HDGFL3Q9Y3E1 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HDGFL3Q9Y3E1 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HDGFL3Q9Y3E1 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HDGFL3Q9Y3E1 RNU6-1066P-201ENST00000363573 105 ntBASIC1.92□□□□□ -2.1
HDGFL3Q9Y3E1 RSL24D1P4-201ENST00000400938 484 ntBASIC1.92□□□□□ -2.1
HDGFL3Q9Y3E1 HMGB1P11-201ENST00000413899 637 ntBASIC1.92□□□□□ -2.1
HDGFL3Q9Y3E1 AL357078.2-201ENST00000416486 427 ntBASIC1.92□□□□□ -2.1
HDGFL3Q9Y3E1 Z98742.3-201ENST00000418637 326 ntBASIC1.92□□□□□ -2.1
HDGFL3Q9Y3E1 AC018630.2-202ENST00000422992 927 ntBASIC1.92□□□□□ -2.1
HDGFL3Q9Y3E1 MTCYBP32-201ENST00000427945 1084 ntBASIC1.92□□□□□ -2.1
HDGFL3Q9Y3E1 SDR42E1P3-201ENST00000438345 502 ntBASIC1.92□□□□□ -2.1
HDGFL3Q9Y3E1 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.92□□□□□ -2.1
HDGFL3Q9Y3E1 DDX3P2-201ENST00000446138 111 ntBASIC1.92□□□□□ -2.1
HDGFL3Q9Y3E1 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC1.92□□□□□ -2.1
HDGFL3Q9Y3E1 HMGN1P5-201ENST00000448591 263 ntBASIC1.92□□□□□ -2.1
HDGFL3Q9Y3E1 COX6CP18-201ENST00000448769 222 ntBASIC1.92□□□□□ -2.1
HDGFL3Q9Y3E1 AL353705.4-201ENST00000449661 238 ntBASIC1.92□□□□□ -2.1
HDGFL3Q9Y3E1 AL118520.1-201ENST00000450770 291 ntBASIC1.92□□□□□ -2.1
HDGFL3Q9Y3E1 LARP1BP2-201ENST00000486594 519 ntBASIC1.92□□□□□ -2.1
HDGFL3Q9Y3E1 GZMAP1-201ENST00000503054 631 ntBASIC1.92□□□□□ -2.1
HDGFL3Q9Y3E1 AC008549.1-201ENST00000512900 643 ntBASIC1.92□□□□□ -2.1
HDGFL3Q9Y3E1 RNU6-1256P-201ENST00000516539 103 ntBASIC1.92□□□□□ -2.1
HDGFL3Q9Y3E1 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.92□□□□□ -2.1
HDGFL3Q9Y3E1 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.92□□□□□ -2.1
HDGFL3Q9Y3E1 AC006518.2-201ENST00000542513 940 ntBASIC1.92□□□□□ -2.1
HDGFL3Q9Y3E1 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC1.92□□□□□ -2.1
HDGFL3Q9Y3E1 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.92□□□□□ -2.1
HDGFL3Q9Y3E1 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.92□□□□□ -2.1
HDGFL3Q9Y3E1 AL391261.3-201ENST00000557194 520 ntBASIC1.92□□□□□ -2.1
HDGFL3Q9Y3E1 AL731537.2-201ENST00000561565 951 ntBASIC1.92□□□□□ -2.1
HDGFL3Q9Y3E1 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.92□□□□□ -2.1
HDGFL3Q9Y3E1 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1.92□□□□□ -2.1
HDGFL3Q9Y3E1 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.92□□□□□ -2.1
HDGFL3Q9Y3E1 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.92□□□□□ -2.1
HDGFL3Q9Y3E1 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.92□□□□□ -2.1
HDGFL3Q9Y3E1 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC1.92□□□□□ -2.1
HDGFL3Q9Y3E1 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC1.92□□□□□ -2.1
HDGFL3Q9Y3E1 DUXAP10-204ENST00000612052 616 ntBASIC1.92□□□□□ -2.1
HDGFL3Q9Y3E1 MIR6130-201ENST00000619419 109 ntBASIC1.92□□□□□ -2.1
HDGFL3Q9Y3E1 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.92□□□□□ -2.1
HDGFL3Q9Y3E1 MIR203B-201ENST00000636080 86 ntBASIC1.92□□□□□ -2.1
HDGFL3Q9Y3E1 ZNF658B-202ENST00000615961 3375 ntBASIC1.92□□□□□ -2.1
HDGFL3Q9Y3E1 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.92□□□□□ -2.1
HDGFL3Q9Y3E1 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HDGFL3Q9Y3E1 SUCLA2P2-201ENST00000417269 1309 ntBASIC1.91□□□□□ -2.1
HDGFL3Q9Y3E1 AC005832.2-201ENST00000538921 1430 ntBASIC1.91□□□□□ -2.1
HDGFL3Q9Y3E1 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
HDGFL3Q9Y3E1 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
HDGFL3Q9Y3E1 RNA5SP37-201ENST00000365420 130 ntBASIC1.91□□□□□ -2.1
HDGFL3Q9Y3E1 SNORA3.2-201ENST00000408221 125 ntBASIC1.91□□□□□ -2.1
HDGFL3Q9Y3E1 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.91□□□□□ -2.1
HDGFL3Q9Y3E1 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.91□□□□□ -2.1
HDGFL3Q9Y3E1 CCDC58P2-201ENST00000417131 366 ntBASIC1.91□□□□□ -2.1
HDGFL3Q9Y3E1 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.91□□□□□ -2.1
HDGFL3Q9Y3E1 AC027644.1-201ENST00000419595 298 ntBASIC1.91□□□□□ -2.1
HDGFL3Q9Y3E1 DPH3P2-201ENST00000422618 250 ntBASIC1.91□□□□□ -2.1
HDGFL3Q9Y3E1 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC1.91□□□□□ -2.1
HDGFL3Q9Y3E1 AL590233.1-201ENST00000430017 456 ntBASIC1.91□□□□□ -2.1
HDGFL3Q9Y3E1 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
HDGFL3Q9Y3E1 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC1.91□□□□□ -2.1
HDGFL3Q9Y3E1 AL049734.2-201ENST00000441066 616 ntBASIC1.91□□□□□ -2.1
HDGFL3Q9Y3E1 PIGFP3-201ENST00000441918 722 ntBASIC1.91□□□□□ -2.1
HDGFL3Q9Y3E1 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.91□□□□□ -2.1
HDGFL3Q9Y3E1 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC1.91□□□□□ -2.1
HDGFL3Q9Y3E1 SCARNA11.3-201ENST00000517276 130 ntBASIC1.91□□□□□ -2.1
HDGFL3Q9Y3E1 AC022634.1-201ENST00000520765 532 ntBASIC1.91□□□□□ -2.1
HDGFL3Q9Y3E1 AC025755.1-201ENST00000521306 278 ntBASIC1.91□□□□□ -2.1
HDGFL3Q9Y3E1 NDUFS5P6-201ENST00000529136 295 ntBASIC1.91□□□□□ -2.1
HDGFL3Q9Y3E1 AP003066.2-201ENST00000529375 555 ntBASIC1.91□□□□□ -2.1
HDGFL3Q9Y3E1 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.91□□□□□ -2.1
HDGFL3Q9Y3E1 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.91□□□□□ -2.1
HDGFL3Q9Y3E1 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.91□□□□□ -2.1
HDGFL3Q9Y3E1 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.91□□□□□ -2.1
HDGFL3Q9Y3E1 AC004853.1-201ENST00000604902 698 ntBASIC1.91□□□□□ -2.1
HDGFL3Q9Y3E1 AC080013.4-201ENST00000607624 649 ntBASIC1.91□□□□□ -2.1
HDGFL3Q9Y3E1 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.91□□□□□ -2.1
HDGFL3Q9Y3E1 VN1R74P-201ENST00000613259 503 ntBASIC1.91□□□□□ -2.1
HDGFL3Q9Y3E1 AC097460.3-201ENST00000623099 442 ntBASIC1.91□□□□□ -2.1
HDGFL3Q9Y3E1 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
HDGFL3Q9Y3E1 OR4G2P-202ENST00000641004 1759 ntBASIC1.9□□□□□ -2.1
HDGFL3Q9Y3E1 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms