Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SSX2IPQ9Y2D8 SCARNA14-201ENST00000516903 136 ntBASIC4.08□□□□□ -1.76
SSX2IPQ9Y2D8 RNU6-410P-201ENST00000517006 107 ntBASIC4.08□□□□□ -1.76
SSX2IPQ9Y2D8 OR4R1P-201ENST00000529879 463 ntBASIC4.08□□□□□ -1.76
SSX2IPQ9Y2D8 AP000857.1-201ENST00000532151 543 ntBASIC4.08□□□□□ -1.76
SSX2IPQ9Y2D8 CR383656.7-201ENST00000548164 174 ntBASIC4.08□□□□□ -1.76
SSX2IPQ9Y2D8 HMGB1P6-201ENST00000569046 646 ntBASIC4.08□□□□□ -1.76
SSX2IPQ9Y2D8 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.08□□□□□ -1.76
SSX2IPQ9Y2D8 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.08□□□□□ -1.76
SSX2IPQ9Y2D8 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.08□□□□□ -1.76
SSX2IPQ9Y2D8 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.08□□□□□ -1.76
SSX2IPQ9Y2D8 SRGNP1-201ENST00000603392 451 ntBASIC4.08□□□□□ -1.76
SSX2IPQ9Y2D8 AC025449.1-201ENST00000603896 529 ntBASIC4.08□□□□□ -1.76
SSX2IPQ9Y2D8 AL031176.1-201ENST00000604554 466 ntBASIC4.08□□□□□ -1.76
SSX2IPQ9Y2D8 Z84480.1-201ENST00000605131 311 ntBASIC4.08□□□□□ -1.76
SSX2IPQ9Y2D8 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.08□□□□□ -1.76
SSX2IPQ9Y2D8 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.08□□□□□ -1.76
SSX2IPQ9Y2D8 AC009033.1-201ENST00000624279 431 ntBASIC4.08□□□□□ -1.76
SSX2IPQ9Y2D8 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
SSX2IPQ9Y2D8 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
SSX2IPQ9Y2D8 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SSX2IPQ9Y2D8 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
SSX2IPQ9Y2D8 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.07□□□□□ -1.76
SSX2IPQ9Y2D8 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.07□□□□□ -1.76
SSX2IPQ9Y2D8 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
SSX2IPQ9Y2D8 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.07□□□□□ -1.76
SSX2IPQ9Y2D8 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.07□□□□□ -1.76
SSX2IPQ9Y2D8 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SSX2IPQ9Y2D8 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SSX2IPQ9Y2D8 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SSX2IPQ9Y2D8 RNU2-47P-201ENST00000410649 186 ntBASIC4.07□□□□□ -1.76
SSX2IPQ9Y2D8 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.07□□□□□ -1.76
SSX2IPQ9Y2D8 AC093578.1-201ENST00000415219 368 ntBASIC4.07□□□□□ -1.76
SSX2IPQ9Y2D8 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.07□□□□□ -1.76
SSX2IPQ9Y2D8 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC4.07□□□□□ -1.76
SSX2IPQ9Y2D8 ARF4P2-201ENST00000430209 526 ntBASIC4.07□□□□□ -1.76
SSX2IPQ9Y2D8 USP12PX-201ENST00000432383 1057 ntBASIC4.07□□□□□ -1.76
SSX2IPQ9Y2D8 HMGN2P31-201ENST00000432430 273 ntBASIC4.07□□□□□ -1.76
SSX2IPQ9Y2D8 HSPD1P21-201ENST00000436541 245 ntBASIC4.07□□□□□ -1.76
SSX2IPQ9Y2D8 RPL35AP22-201ENST00000436855 335 ntBASIC4.07□□□□□ -1.76
SSX2IPQ9Y2D8 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.07□□□□□ -1.76
SSX2IPQ9Y2D8 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.07□□□□□ -1.76
SSX2IPQ9Y2D8 FDX1P2-201ENST00000450769 375 ntBASIC4.07□□□□□ -1.76
SSX2IPQ9Y2D8 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC4.07□□□□□ -1.76
SSX2IPQ9Y2D8 RNU6-420P-201ENST00000458780 107 ntBASIC4.07□□□□□ -1.76
SSX2IPQ9Y2D8 RNU6-261P-201ENST00000459506 102 ntBASIC4.07□□□□□ -1.76
SSX2IPQ9Y2D8 AC092451.1-201ENST00000480211 153 ntBASIC4.07□□□□□ -1.76
SSX2IPQ9Y2D8 AC020893.1-201ENST00000502452 580 ntBASIC4.07□□□□□ -1.76
SSX2IPQ9Y2D8 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.07□□□□□ -1.76
SSX2IPQ9Y2D8 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.07□□□□□ -1.76
SSX2IPQ9Y2D8 RNU6-798P-201ENST00000516912 103 ntBASIC4.07□□□□□ -1.76
SSX2IPQ9Y2D8 RNU6-1220P-201ENST00000517126 108 ntBASIC4.07□□□□□ -1.76
SSX2IPQ9Y2D8 HMGN1P28-201ENST00000521340 364 ntBASIC4.07□□□□□ -1.76
SSX2IPQ9Y2D8 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.07□□□□□ -1.76
SSX2IPQ9Y2D8 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.07□□□□□ -1.76
SSX2IPQ9Y2D8 RPL21P12-201ENST00000559810 515 ntBASIC4.07□□□□□ -1.76
SSX2IPQ9Y2D8 AC105224.1-201ENST00000587055 421 ntBASIC4.07□□□□□ -1.76
SSX2IPQ9Y2D8 AC060780.3-201ENST00000589464 80 ntBASIC4.07□□□□□ -1.76
SSX2IPQ9Y2D8 LARP7P1-201ENST00000605576 316 ntBASIC4.07□□□□□ -1.76
SSX2IPQ9Y2D8 AP003122.6-201ENST00000623831 495 ntBASIC4.07□□□□□ -1.76
SSX2IPQ9Y2D8 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.07□□□□□ -1.76
SSX2IPQ9Y2D8 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SSX2IPQ9Y2D8 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.07□□□□□ -1.76
SSX2IPQ9Y2D8 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
SSX2IPQ9Y2D8 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SSX2IPQ9Y2D8 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SSX2IPQ9Y2D8 MTCO1P9-201ENST00000505577 1534 ntBASIC4.06□□□□□ -1.76
SSX2IPQ9Y2D8 CKAP2P1-201ENST00000555477 2049 ntBASIC4.06□□□□□ -1.76
SSX2IPQ9Y2D8 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SSX2IPQ9Y2D8 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.06□□□□□ -1.76
SSX2IPQ9Y2D8 Y_RNA.38-201ENST00000362617 102 ntBASIC4.06□□□□□ -1.76
SSX2IPQ9Y2D8 U3.11-201ENST00000364476 212 ntBASIC4.06□□□□□ -1.76
SSX2IPQ9Y2D8 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
SSX2IPQ9Y2D8 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SSX2IPQ9Y2D8 RNU6-908P-201ENST00000410160 94 ntBASIC4.06□□□□□ -1.76
SSX2IPQ9Y2D8 AC012498.1-201ENST00000424037 437 ntBASIC4.06□□□□□ -1.76
SSX2IPQ9Y2D8 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.06□□□□□ -1.76
SSX2IPQ9Y2D8 AC087650.1-201ENST00000431445 468 ntBASIC4.06□□□□□ -1.76
SSX2IPQ9Y2D8 SEPT14P3-201ENST00000439401 183 ntBASIC4.06□□□□□ -1.76
SSX2IPQ9Y2D8 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC4.06□□□□□ -1.76
SSX2IPQ9Y2D8 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.06□□□□□ -1.76
SSX2IPQ9Y2D8 AL732372.2-207ENST00000445840 183 ntBASIC4.06□□□□□ -1.76
SSX2IPQ9Y2D8 RPS3AP46-201ENST00000448352 682 ntBASIC4.06□□□□□ -1.76
SSX2IPQ9Y2D8 SEPT14P2-201ENST00000453405 183 ntBASIC4.06□□□□□ -1.76
SSX2IPQ9Y2D8 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.06□□□□□ -1.76
SSX2IPQ9Y2D8 SNORD105B-201ENST00000458770 79 ntBASIC4.06□□□□□ -1.76
SSX2IPQ9Y2D8 snoU13.24-201ENST00000458998 104 ntBASIC4.06□□□□□ -1.76
SSX2IPQ9Y2D8 RPL31P61-201ENST00000496160 376 ntBASIC4.06□□□□□ -1.76
SSX2IPQ9Y2D8 MTCYBP18-201ENST00000501056 747 ntBASIC4.06□□□□□ -1.76
SSX2IPQ9Y2D8 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.06□□□□□ -1.76
SSX2IPQ9Y2D8 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.06□□□□□ -1.76
SSX2IPQ9Y2D8 AC098799.2-201ENST00000509466 868 ntBASIC4.06□□□□□ -1.76
SSX2IPQ9Y2D8 TMEM248P1-201ENST00000510579 951 ntBASIC4.06□□□□□ -1.76
SSX2IPQ9Y2D8 SEPT14P4-201ENST00000513445 186 ntBASIC4.06□□□□□ -1.76
SSX2IPQ9Y2D8 SCARNA24.1-201ENST00000516465 137 ntBASIC4.06□□□□□ -1.76
SSX2IPQ9Y2D8 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.06□□□□□ -1.76
SSX2IPQ9Y2D8 FO082796.1-201ENST00000523795 183 ntBASIC4.06□□□□□ -1.76
SSX2IPQ9Y2D8 AF235103.2-201ENST00000525753 346 ntBASIC4.06□□□□□ -1.76
SSX2IPQ9Y2D8 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.06□□□□□ -1.76
SSX2IPQ9Y2D8 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 141.5 ms