Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 HMGN2P20-201ENST00000437531 273 ntBASIC5.35□□□□□ -1.55
CDK11AQ9UQ88 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC5.35□□□□□ -1.55
CDK11AQ9UQ88 AC012181.1-201ENST00000479895 423 ntBASIC5.35□□□□□ -1.55
CDK11AQ9UQ88 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC5.35□□□□□ -1.55
CDK11AQ9UQ88 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC5.35□□□□□ -1.55
CDK11AQ9UQ88 RNU2-46P-201ENST00000517038 113 ntBASIC5.35□□□□□ -1.55
CDK11AQ9UQ88 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC5.35□□□□□ -1.55
CDK11AQ9UQ88 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC5.35□□□□□ -1.55
CDK11AQ9UQ88 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC5.35□□□□□ -1.55
CDK11AQ9UQ88 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC5.35□□□□□ -1.55
CDK11AQ9UQ88 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC5.35□□□□□ -1.55
CDK11AQ9UQ88 AC027807.1-201ENST00000559921 996 ntBASIC5.35□□□□□ -1.55
CDK11AQ9UQ88 AL161729.4-201ENST00000604650 476 ntBASIC5.35□□□□□ -1.55
CDK11AQ9UQ88 TUG1_1.1-201ENST00000610654 145 ntBASIC5.35□□□□□ -1.55
CDK11AQ9UQ88 U6atac.1-201ENST00000616025 117 ntBASIC5.35□□□□□ -1.55
CDK11AQ9UQ88 5S_rRNA.12-201ENST00000617631 107 ntBASIC5.35□□□□□ -1.55
CDK11AQ9UQ88 AC138649.3-201ENST00000622154 254 ntBASIC5.35□□□□□ -1.55
CDK11AQ9UQ88 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDK11AQ9UQ88 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CDK11AQ9UQ88 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CDK11AQ9UQ88 U8.3-201ENST00000363321 132 ntBASIC5.34□□□□□ -1.55
CDK11AQ9UQ88 RNA5SP42-201ENST00000364278 115 ntBASIC5.34□□□□□ -1.55
CDK11AQ9UQ88 AL136372.1-201ENST00000403060 228 ntBASIC5.34□□□□□ -1.55
CDK11AQ9UQ88 RNU2-47P-201ENST00000410649 186 ntBASIC5.34□□□□□ -1.55
CDK11AQ9UQ88 BEND7P1-201ENST00000422058 457 ntBASIC5.34□□□□□ -1.55
CDK11AQ9UQ88 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC5.34□□□□□ -1.55
CDK11AQ9UQ88 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC5.34□□□□□ -1.55
CDK11AQ9UQ88 MTND3P21-201ENST00000433774 331 ntBASIC5.34□□□□□ -1.55
CDK11AQ9UQ88 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC5.34□□□□□ -1.55
CDK11AQ9UQ88 MTND1P4-201ENST00000435196 415 ntBASIC5.34□□□□□ -1.55
CDK11AQ9UQ88 AL049734.2-201ENST00000441066 616 ntBASIC5.34□□□□□ -1.55
CDK11AQ9UQ88 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC5.34□□□□□ -1.55
CDK11AQ9UQ88 NANOGNBP1-201ENST00000448444 480 ntBASIC5.34□□□□□ -1.55
CDK11AQ9UQ88 AL049873.1-201ENST00000480540 376 ntBASIC5.34□□□□□ -1.55
CDK11AQ9UQ88 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC5.34□□□□□ -1.55
CDK11AQ9UQ88 RPL7P23-201ENST00000493874 747 ntBASIC5.34□□□□□ -1.55
CDK11AQ9UQ88 KCTD9P5-201ENST00000504141 1170 ntBASIC5.34□□□□□ -1.55
CDK11AQ9UQ88 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC5.34□□□□□ -1.55
CDK11AQ9UQ88 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC5.34□□□□□ -1.55
CDK11AQ9UQ88 OR5G4P-201ENST00000525251 760 ntBASIC5.34□□□□□ -1.55
CDK11AQ9UQ88 DEFB108A-201ENST00000530110 222 ntBASIC5.34□□□□□ -1.55
CDK11AQ9UQ88 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDK11AQ9UQ88 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDK11AQ9UQ88 AL356432.3-201ENST00000568952 465 ntBASIC5.34□□□□□ -1.55
CDK11AQ9UQ88 AL391840.1-201ENST00000571144 367 ntBASIC5.34□□□□□ -1.55
CDK11AQ9UQ88 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC5.34□□□□□ -1.55
CDK11AQ9UQ88 AC099489.2-201ENST00000574976 260 ntBASIC5.34□□□□□ -1.55
CDK11AQ9UQ88 MIR4474-201ENST00000579189 78 ntBASIC5.34□□□□□ -1.55
CDK11AQ9UQ88 MTATP6P3-201ENST00000581686 676 ntBASIC5.34□□□□□ -1.55
CDK11AQ9UQ88 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC5.34□□□□□ -1.55
CDK11AQ9UQ88 AC006254.3-201ENST00000603353 884 ntBASIC5.34□□□□□ -1.55
CDK11AQ9UQ88 AC245014.2-201ENST00000603689 287 ntBASIC5.34□□□□□ -1.55
CDK11AQ9UQ88 AL022099.1-201ENST00000604551 712 ntBASIC5.34□□□□□ -1.55
CDK11AQ9UQ88 AC246785.4-201ENST00000605374 287 ntBASIC5.34□□□□□ -1.55
CDK11AQ9UQ88 AC091304.9-201ENST00000612091 226 ntBASIC5.34□□□□□ -1.55
CDK11AQ9UQ88 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CDK11AQ9UQ88 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
CDK11AQ9UQ88 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.56
CDK11AQ9UQ88 AC118273.1-201ENST00000525324 3006 ntBASIC5.34□□□□□ -1.56
CDK11AQ9UQ88 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC5.33□□□□□ -1.56
CDK11AQ9UQ88 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDK11AQ9UQ88 Y_RNA.296-201ENST00000364930 108 ntBASIC5.33□□□□□ -1.56
CDK11AQ9UQ88 RNU6-882P-201ENST00000391025 103 ntBASIC5.33□□□□□ -1.56
CDK11AQ9UQ88 UBA52P6-201ENST00000399822 382 ntBASIC5.33□□□□□ -1.56
CDK11AQ9UQ88 RNU4-47P-201ENST00000410876 114 ntBASIC5.33□□□□□ -1.56
CDK11AQ9UQ88 RPL21P109-201ENST00000422213 475 ntBASIC5.33□□□□□ -1.56
CDK11AQ9UQ88 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC5.33□□□□□ -1.56
CDK11AQ9UQ88 AC233728.2-201ENST00000425348 757 ntBASIC5.33□□□□□ -1.56
CDK11AQ9UQ88 AL589872.1-201ENST00000426602 288 ntBASIC5.33□□□□□ -1.56
CDK11AQ9UQ88 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC5.33□□□□□ -1.56
CDK11AQ9UQ88 MTATP6P13-201ENST00000438531 667 ntBASIC5.33□□□□□ -1.56
CDK11AQ9UQ88 DNAJC19P4-201ENST00000440115 345 ntBASIC5.33□□□□□ -1.56
CDK11AQ9UQ88 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC5.33□□□□□ -1.56
CDK11AQ9UQ88 OFD1P4Y-201ENST00000455273 1179 ntBASIC5.33□□□□□ -1.56
CDK11AQ9UQ88 RN7SL93P-201ENST00000463035 293 ntBASIC5.33□□□□□ -1.56
CDK11AQ9UQ88 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC5.33□□□□□ -1.56
CDK11AQ9UQ88 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
CDK11AQ9UQ88 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC5.33□□□□□ -1.56
CDK11AQ9UQ88 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDK11AQ9UQ88 AC123904.2-201ENST00000548059 300 ntBASIC5.33□□□□□ -1.56
CDK11AQ9UQ88 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC5.33□□□□□ -1.56
CDK11AQ9UQ88 ZNF519P2-201ENST00000557032 169 ntBASIC5.33□□□□□ -1.56
CDK11AQ9UQ88 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC5.33□□□□□ -1.56
CDK11AQ9UQ88 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC5.33□□□□□ -1.56
CDK11AQ9UQ88 AL353743.1-202ENST00000431724 1695 ntBASIC5.33□□□□□ -1.56
CDK11AQ9UQ88 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDK11AQ9UQ88 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC5.33□□□□□ -1.56
CDK11AQ9UQ88 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDK11AQ9UQ88 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDK11AQ9UQ88 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC5.32□□□□□ -1.56
CDK11AQ9UQ88 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CDK11AQ9UQ88 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDK11AQ9UQ88 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CDK11AQ9UQ88 RNU6-114P-201ENST00000384704 105 ntBASIC5.32□□□□□ -1.56
CDK11AQ9UQ88 RPS3AP36-201ENST00000398190 775 ntBASIC5.32□□□□□ -1.56
CDK11AQ9UQ88 HSPE1P8-201ENST00000406997 288 ntBASIC5.32□□□□□ -1.56
CDK11AQ9UQ88 HMGN1P24-201ENST00000412282 298 ntBASIC5.32□□□□□ -1.56
CDK11AQ9UQ88 PIGFP2-201ENST00000421400 651 ntBASIC5.32□□□□□ -1.56
CDK11AQ9UQ88 ISCA1P6-201ENST00000427740 390 ntBASIC5.32□□□□□ -1.56
CDK11AQ9UQ88 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms