Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 AC007336.1-201ENST00000576365 3828 ntBASIC5.41□□□□□ -1.54
SHROOM4Q9ULL8 CUL1P1-201ENST00000509510 2425 ntBASIC5.41□□□□□ -1.54
SHROOM4Q9ULL8 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
SHROOM4Q9ULL8 RNY4P24-201ENST00000362735 96 ntBASIC5.41□□□□□ -1.54
SHROOM4Q9ULL8 RNU1-112P-201ENST00000364401 164 ntBASIC5.41□□□□□ -1.54
SHROOM4Q9ULL8 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC5.41□□□□□ -1.54
SHROOM4Q9ULL8 RPL26P6-201ENST00000440913 438 ntBASIC5.41□□□□□ -1.54
SHROOM4Q9ULL8 RPL17P49-201ENST00000443728 411 ntBASIC5.41□□□□□ -1.54
SHROOM4Q9ULL8 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC5.41□□□□□ -1.54
SHROOM4Q9ULL8 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC5.41□□□□□ -1.54
SHROOM4Q9ULL8 AC060771.1-201ENST00000582031 164 ntBASIC5.41□□□□□ -1.54
SHROOM4Q9ULL8 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC5.41□□□□□ -1.54
SHROOM4Q9ULL8 AL139344.1-201ENST00000605228 195 ntBASIC5.41□□□□□ -1.54
SHROOM4Q9ULL8 Z99289.3-201ENST00000605586 594 ntBASIC5.41□□□□□ -1.54
SHROOM4Q9ULL8 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
SHROOM4Q9ULL8 PWAR6-201ENST00000552334 4618 ntBASIC5.41□□□□□ -1.54
SHROOM4Q9ULL8 AC008568.2-201ENST00000623862 2313 ntBASIC5.4□□□□□ -1.54
SHROOM4Q9ULL8 RNU6-432P-201ENST00000384196 109 ntBASIC5.4□□□□□ -1.54
SHROOM4Q9ULL8 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
SHROOM4Q9ULL8 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC5.4□□□□□ -1.54
SHROOM4Q9ULL8 AL356867.1-201ENST00000429623 299 ntBASIC5.4□□□□□ -1.54
SHROOM4Q9ULL8 RAB6C-AS1-202ENST00000433431 123 ntBASIC5.4□□□□□ -1.54
SHROOM4Q9ULL8 AC104058.1-201ENST00000448028 297 ntBASIC5.4□□□□□ -1.54
SHROOM4Q9ULL8 OR6C5P-201ENST00000452388 923 ntBASIC5.4□□□□□ -1.54
SHROOM4Q9ULL8 FAM60DP-201ENST00000524174 632 ntBASIC5.4□□□□□ -1.54
SHROOM4Q9ULL8 AC013828.2-201ENST00000532487 235 ntBASIC5.4□□□□□ -1.54
SHROOM4Q9ULL8 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC5.4□□□□□ -1.54
SHROOM4Q9ULL8 AC008015.1-201ENST00000555505 465 ntBASIC5.4□□□□□ -1.54
SHROOM4Q9ULL8 AC090616.2-202ENST00000584248 222 ntBASIC5.4□□□□□ -1.54
SHROOM4Q9ULL8 AL390240.1-201ENST00000612950 384 ntBASIC5.4□□□□□ -1.54
SHROOM4Q9ULL8 AP000676.3-201ENST00000623299 569 ntBASIC5.4□□□□□ -1.54
SHROOM4Q9ULL8 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SHROOM4Q9ULL8 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
SHROOM4Q9ULL8 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHROOM4Q9ULL8 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC5.39□□□□□ -1.55
SHROOM4Q9ULL8 AC018630.2-202ENST00000422992 927 ntBASIC5.39□□□□□ -1.55
SHROOM4Q9ULL8 UBE2D3P2-201ENST00000424409 445 ntBASIC5.39□□□□□ -1.55
SHROOM4Q9ULL8 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC5.39□□□□□ -1.55
SHROOM4Q9ULL8 SSXP4-201ENST00000451349 245 ntBASIC5.39□□□□□ -1.55
SHROOM4Q9ULL8 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC5.39□□□□□ -1.55
SHROOM4Q9ULL8 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC5.39□□□□□ -1.55
SHROOM4Q9ULL8 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC5.39□□□□□ -1.55
SHROOM4Q9ULL8 MTATP6P15-201ENST00000527233 835 ntBASIC5.39□□□□□ -1.55
SHROOM4Q9ULL8 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC5.39□□□□□ -1.55
SHROOM4Q9ULL8 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC5.39□□□□□ -1.55
SHROOM4Q9ULL8 AC122133.1-201ENST00000613964 233 ntBASIC5.39□□□□□ -1.55
SHROOM4Q9ULL8 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC5.39□□□□□ -1.55
SHROOM4Q9ULL8 MIR6817-201ENST00000615588 66 ntBASIC5.39□□□□□ -1.55
SHROOM4Q9ULL8 AP001486.2-201ENST00000561652 5113 ntBASIC5.39□□□□□ -1.55
SHROOM4Q9ULL8 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SHROOM4Q9ULL8 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHROOM4Q9ULL8 RNU5A-1-201ENST00000362698 116 ntBASIC5.39□□□□□ -1.55
SHROOM4Q9ULL8 RN7SKP285-201ENST00000410137 318 ntBASIC5.39□□□□□ -1.55
SHROOM4Q9ULL8 RPL32P35-201ENST00000415214 394 ntBASIC5.39□□□□□ -1.55
SHROOM4Q9ULL8 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC5.39□□□□□ -1.55
SHROOM4Q9ULL8 PPP1R11P2-201ENST00000423543 382 ntBASIC5.39□□□□□ -1.55
SHROOM4Q9ULL8 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC5.39□□□□□ -1.55
SHROOM4Q9ULL8 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SHROOM4Q9ULL8 PCMTD1P2-201ENST00000565017 355 ntBASIC5.39□□□□□ -1.55
SHROOM4Q9ULL8 AL158211.1-201ENST00000566763 763 ntBASIC5.39□□□□□ -1.55
SHROOM4Q9ULL8 AP001004.1-201ENST00000582468 324 ntBASIC5.39□□□□□ -1.55
SHROOM4Q9ULL8 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC5.39□□□□□ -1.55
SHROOM4Q9ULL8 AL136164.4-201ENST00000625013 2135 ntBASIC5.38□□□□□ -1.55
SHROOM4Q9ULL8 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
SHROOM4Q9ULL8 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SHROOM4Q9ULL8 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
SHROOM4Q9ULL8 MTND4P16-201ENST00000466108 1367 ntBASIC5.38□□□□□ -1.55
SHROOM4Q9ULL8 U3.6-201ENST00000363622 211 ntBASIC5.38□□□□□ -1.55
SHROOM4Q9ULL8 AL133217.1-201ENST00000450980 425 ntBASIC5.38□□□□□ -1.55
SHROOM4Q9ULL8 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC5.38□□□□□ -1.55
SHROOM4Q9ULL8 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC5.38□□□□□ -1.55
SHROOM4Q9ULL8 AC022690.1-201ENST00000526681 550 ntBASIC5.38□□□□□ -1.55
SHROOM4Q9ULL8 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC5.38□□□□□ -1.55
SHROOM4Q9ULL8 DEFB122-202ENST00000569013 197 ntBASIC5.38□□□□□ -1.55
SHROOM4Q9ULL8 RPL23AP84-201ENST00000571193 464 ntBASIC5.38□□□□□ -1.55
SHROOM4Q9ULL8 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC5.38□□□□□ -1.55
SHROOM4Q9ULL8 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC5.38□□□□□ -1.55
SHROOM4Q9ULL8 AC093838.1-201ENST00000613014 469 ntBASIC5.38□□□□□ -1.55
SHROOM4Q9ULL8 AC006927.3-201ENST00000638789 384 ntBASIC5.38□□□□□ -1.55
SHROOM4Q9ULL8 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SHROOM4Q9ULL8 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SHROOM4Q9ULL8 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SHROOM4Q9ULL8 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SHROOM4Q9ULL8 MIR196B-201ENST00000384852 84 ntBASIC5.37□□□□□ -1.55
SHROOM4Q9ULL8 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC5.37□□□□□ -1.55
SHROOM4Q9ULL8 HNRNPDLP1-201ENST00000412834 550 ntBASIC5.37□□□□□ -1.55
SHROOM4Q9ULL8 TEX41-202ENST00000414256 604 ntTSL 5 BASIC5.37□□□□□ -1.55
SHROOM4Q9ULL8 TMEM167AP1-201ENST00000423409 219 ntBASIC5.37□□□□□ -1.55
SHROOM4Q9ULL8 AL445669.1-201ENST00000426743 755 ntBASIC5.37□□□□□ -1.55
SHROOM4Q9ULL8 RPL37P21-201ENST00000435890 276 ntBASIC5.37□□□□□ -1.55
SHROOM4Q9ULL8 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC5.37□□□□□ -1.55
SHROOM4Q9ULL8 RPL21P41-201ENST00000459863 264 ntBASIC5.37□□□□□ -1.55
SHROOM4Q9ULL8 RPL31P60-201ENST00000478450 367 ntBASIC5.37□□□□□ -1.55
SHROOM4Q9ULL8 ANXA2P1-201ENST00000505539 926 ntBASIC5.37□□□□□ -1.55
SHROOM4Q9ULL8 SNORA31.22-201ENST00000517204 135 ntBASIC5.37□□□□□ -1.55
SHROOM4Q9ULL8 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SHROOM4Q9ULL8 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC5.37□□□□□ -1.55
SHROOM4Q9ULL8 AC012435.1-202ENST00000568772 240 ntBASIC5.37□□□□□ -1.55
SHROOM4Q9ULL8 U6.98-201ENST00000637157 84 ntBASIC5.37□□□□□ -1.55
SHROOM4Q9ULL8 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms