Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 RNA5SP291-201ENST00000517222 105 ntBASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 RN7SL708P-201ENST00000580952 299 ntBASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 MIR4660-201ENST00000583549 74 ntBASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 HMGB2P1-201ENST00000591146 634 ntBASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 SNRPGP15-201ENST00000600149 222 ntBASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 AC008121.1-201ENST00000603244 268 ntBASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 AP002826.1-201ENST00000608835 315 ntBASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 AC096772.1-201ENST00000609146 564 ntBASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 AC009318.2-201ENST00000610917 651 ntBASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 AL161629.2-201ENST00000615347 275 ntBASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 GVINP1-202ENST00000531871 7271 ntBASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
FOXD3Q9UJU5 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
FOXD3Q9UJU5 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
FOXD3Q9UJU5 AC093591.2-201ENST00000565254 3843 ntBASIC4.8□□□□□ -1.64
FOXD3Q9UJU5 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.8□□□□□ -1.64
FOXD3Q9UJU5 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
FOXD3Q9UJU5 SMG1P4-204ENST00000523028 4131 ntBASIC4.8□□□□□ -1.64
FOXD3Q9UJU5 MIR133B-201ENST00000362210 119 ntBASIC4.8□□□□□ -1.64
FOXD3Q9UJU5 Y_RNA.183-201ENST00000363882 113 ntBASIC4.8□□□□□ -1.64
FOXD3Q9UJU5 RNA5SP455-201ENST00000365190 119 ntBASIC4.8□□□□□ -1.64
FOXD3Q9UJU5 SNORA70.6-201ENST00000383934 134 ntBASIC4.8□□□□□ -1.64
FOXD3Q9UJU5 MIR124-3-201ENST00000384866 87 ntBASIC4.8□□□□□ -1.64
FOXD3Q9UJU5 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
FOXD3Q9UJU5 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.8□□□□□ -1.64
FOXD3Q9UJU5 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.8□□□□□ -1.64
FOXD3Q9UJU5 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.8□□□□□ -1.64
FOXD3Q9UJU5 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.8□□□□□ -1.64
FOXD3Q9UJU5 CYP4F29P-201ENST00000420685 446 ntBASIC4.8□□□□□ -1.64
FOXD3Q9UJU5 AL590383.1-201ENST00000428602 75 ntBASIC4.8□□□□□ -1.64
FOXD3Q9UJU5 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.8□□□□□ -1.64
FOXD3Q9UJU5 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.8□□□□□ -1.64
FOXD3Q9UJU5 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
FOXD3Q9UJU5 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.8□□□□□ -1.64
FOXD3Q9UJU5 GAPDHP25-201ENST00000447061 1001 ntBASIC4.8□□□□□ -1.64
FOXD3Q9UJU5 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
FOXD3Q9UJU5 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
FOXD3Q9UJU5 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.8□□□□□ -1.64
FOXD3Q9UJU5 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.8□□□□□ -1.64
FOXD3Q9UJU5 snoU13.24-201ENST00000458998 104 ntBASIC4.8□□□□□ -1.64
FOXD3Q9UJU5 AC093270.2-201ENST00000486157 792 ntBASIC4.8□□□□□ -1.64
FOXD3Q9UJU5 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.8□□□□□ -1.64
FOXD3Q9UJU5 RNU6-397P-201ENST00000516226 104 ntBASIC4.8□□□□□ -1.64
FOXD3Q9UJU5 RNA5SP230-201ENST00000517039 122 ntBASIC4.8□□□□□ -1.64
FOXD3Q9UJU5 AP003733.2-201ENST00000529409 171 ntBASIC4.8□□□□□ -1.64
FOXD3Q9UJU5 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.8□□□□□ -1.64
FOXD3Q9UJU5 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC4.8□□□□□ -1.64
FOXD3Q9UJU5 RN7SL356P-201ENST00000582228 248 ntBASIC4.8□□□□□ -1.64
FOXD3Q9UJU5 AC069307.1-201ENST00000602820 447 ntBASIC4.8□□□□□ -1.64
FOXD3Q9UJU5 AP002799.1-201ENST00000623552 423 ntBASIC4.8□□□□□ -1.64
FOXD3Q9UJU5 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC4.8□□□□□ -1.64
FOXD3Q9UJU5 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.8□□□□□ -1.64
FOXD3Q9UJU5 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
FOXD3Q9UJU5 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
FOXD3Q9UJU5 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
FOXD3Q9UJU5 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
FOXD3Q9UJU5 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
FOXD3Q9UJU5 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.8□□□□□ -1.64
FOXD3Q9UJU5 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC4.8□□□□□ -1.64
FOXD3Q9UJU5 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
FOXD3Q9UJU5 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
FOXD3Q9UJU5 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
FOXD3Q9UJU5 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
FOXD3Q9UJU5 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.79□□□□□ -1.64
FOXD3Q9UJU5 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
FOXD3Q9UJU5 Y_RNA.26-201ENST00000362539 101 ntBASIC4.79□□□□□ -1.64
FOXD3Q9UJU5 Y_RNA.60-201ENST00000362831 98 ntBASIC4.79□□□□□ -1.64
FOXD3Q9UJU5 RNU6-806P-201ENST00000365147 105 ntBASIC4.79□□□□□ -1.64
FOXD3Q9UJU5 RNU6-1181P-201ENST00000384191 106 ntBASIC4.79□□□□□ -1.64
FOXD3Q9UJU5 MIR10A-201ENST00000385043 110 ntBASIC4.79□□□□□ -1.64
FOXD3Q9UJU5 RNU6-1093P-201ENST00000391194 107 ntBASIC4.79□□□□□ -1.64
FOXD3Q9UJU5 SNORA40C-201ENST00000391285 128 ntBASIC4.79□□□□□ -1.64
FOXD3Q9UJU5 GSTM5P1-201ENST00000434751 660 ntBASIC4.79□□□□□ -1.64
FOXD3Q9UJU5 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.79□□□□□ -1.64
FOXD3Q9UJU5 RN7SKP210-201ENST00000459176 261 ntBASIC4.79□□□□□ -1.64
FOXD3Q9UJU5 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.79□□□□□ -1.64
FOXD3Q9UJU5 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC4.79□□□□□ -1.64
FOXD3Q9UJU5 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.79□□□□□ -1.64
FOXD3Q9UJU5 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.79□□□□□ -1.64
FOXD3Q9UJU5 AC025755.1-201ENST00000521306 278 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms