Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.65□□□□□ -2.14
SCN11AQ9UI33 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.65□□□□□ -2.14
SCN11AQ9UI33 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.65□□□□□ -2.14
SCN11AQ9UI33 AL391646.1-201ENST00000603860 190 ntBASIC1.65□□□□□ -2.14
SCN11AQ9UI33 AC013553.2-201ENST00000604244 589 ntBASIC1.65□□□□□ -2.14
SCN11AQ9UI33 AL590233.1-201ENST00000430017 456 ntBASIC1.64□□□□□ -2.15
SCN11AQ9UI33 AC096992.1-201ENST00000459808 709 ntBASIC1.64□□□□□ -2.15
SCN11AQ9UI33 AC093801.2-201ENST00000503966 1050 ntBASIC1.64□□□□□ -2.15
SCN11AQ9UI33 AC093767.1-201ENST00000504523 156 ntBASIC1.64□□□□□ -2.15
SCN11AQ9UI33 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
SCN11AQ9UI33 AL359273.1-201ENST00000510918 627 ntBASIC1.64□□□□□ -2.15
SCN11AQ9UI33 MIR514B-201ENST00000516774 80 ntBASIC1.64□□□□□ -2.15
SCN11AQ9UI33 AC005730.3-201ENST00000583067 366 ntBASIC1.64□□□□□ -2.15
SCN11AQ9UI33 AL162373.1-201ENST00000620433 407 ntBASIC1.64□□□□□ -2.15
SCN11AQ9UI33 MTND5P10-201ENST00000603719 1809 ntBASIC1.64□□□□□ -2.15
SCN11AQ9UI33 AL035407.2-201ENST00000454090 378 ntBASIC1.64□□□□□ -2.15
SCN11AQ9UI33 BZW1P2-201ENST00000473537 826 ntBASIC1.64□□□□□ -2.15
SCN11AQ9UI33 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.64□□□□□ -2.15
SCN11AQ9UI33 AC025768.1-201ENST00000510057 267 ntBASIC1.64□□□□□ -2.15
SCN11AQ9UI33 RNA5SP471-201ENST00000516971 106 ntBASIC1.64□□□□□ -2.15
SCN11AQ9UI33 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
SCN11AQ9UI33 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
SCN11AQ9UI33 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.64□□□□□ -2.15
SCN11AQ9UI33 AC011712.1-201ENST00000588959 234 ntBASIC1.64□□□□□ -2.15
SCN11AQ9UI33 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
SCN11AQ9UI33 DDX10P1-201ENST00000448545 1933 ntBASIC1.63□□□□□ -2.15
SCN11AQ9UI33 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
SCN11AQ9UI33 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
SCN11AQ9UI33 Y_RNA.30-201ENST00000362572 97 ntBASIC1.63□□□□□ -2.15
SCN11AQ9UI33 AC244033.1-201ENST00000426826 870 ntBASIC1.63□□□□□ -2.15
SCN11AQ9UI33 MTND5P25-201ENST00000430499 799 ntBASIC1.63□□□□□ -2.15
SCN11AQ9UI33 snoU109.4-201ENST00000458953 143 ntBASIC1.63□□□□□ -2.15
SCN11AQ9UI33 KLRA1P-201ENST00000503499 986 ntBASIC1.63□□□□□ -2.15
SCN11AQ9UI33 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.63□□□□□ -2.15
SCN11AQ9UI33 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.63□□□□□ -2.15
SCN11AQ9UI33 GLYCAM1-201ENST00000546596 285 ntBASIC1.63□□□□□ -2.15
SCN11AQ9UI33 AC068135.2-201ENST00000569293 1028 ntBASIC1.63□□□□□ -2.15
SCN11AQ9UI33 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.63□□□□□ -2.15
SCN11AQ9UI33 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.63□□□□□ -2.15
SCN11AQ9UI33 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
SCN11AQ9UI33 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
SCN11AQ9UI33 MIR520E-201ENST00000384867 87 ntBASIC1.62□□□□□ -2.15
SCN11AQ9UI33 AL589994.1-201ENST00000404962 340 ntBASIC1.62□□□□□ -2.15
SCN11AQ9UI33 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.62□□□□□ -2.15
SCN11AQ9UI33 RPS12P24-201ENST00000412619 387 ntBASIC1.62□□□□□ -2.15
SCN11AQ9UI33 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.62□□□□□ -2.15
SCN11AQ9UI33 RPL31P63-201ENST00000422565 375 ntBASIC1.62□□□□□ -2.15
SCN11AQ9UI33 AL078601.1-201ENST00000444542 271 ntBASIC1.62□□□□□ -2.15
SCN11AQ9UI33 BMI1P1-201ENST00000445879 941 ntBASIC1.62□□□□□ -2.15
SCN11AQ9UI33 snoU13.3-201ENST00000459441 104 ntBASIC1.62□□□□□ -2.15
SCN11AQ9UI33 HMGB3P17-201ENST00000504195 649 ntBASIC1.62□□□□□ -2.15
SCN11AQ9UI33 AC084364.2-201ENST00000546924 395 ntBASIC1.62□□□□□ -2.15
SCN11AQ9UI33 MIR4658-201ENST00000584344 65 ntBASIC1.62□□□□□ -2.15
SCN11AQ9UI33 AP000560.1-201ENST00000624150 1937 ntBASIC1.62□□□□□ -2.15
SCN11AQ9UI33 ZNF519P1-201ENST00000449011 1626 ntBASIC1.62□□□□□ -2.15
SCN11AQ9UI33 HMGB1P5-201ENST00000255320 642 ntBASIC1.62□□□□□ -2.15
SCN11AQ9UI33 RNU6-203P-201ENST00000384038 104 ntBASIC1.62□□□□□ -2.15
SCN11AQ9UI33 SNORA46.1-201ENST00000391069 153 ntBASIC1.62□□□□□ -2.15
SCN11AQ9UI33 AC016769.3-201ENST00000396562 315 ntBASIC1.62□□□□□ -2.15
SCN11AQ9UI33 TPMTP3-201ENST00000411928 735 ntBASIC1.62□□□□□ -2.15
SCN11AQ9UI33 TRAPPC2P4-201ENST00000421750 331 ntBASIC1.62□□□□□ -2.15
SCN11AQ9UI33 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.62□□□□□ -2.15
SCN11AQ9UI33 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC1.62□□□□□ -2.15
SCN11AQ9UI33 ARL5AP2-201ENST00000444698 533 ntBASIC1.62□□□□□ -2.15
SCN11AQ9UI33 FO393415.2-201ENST00000480085 343 ntBASIC1.62□□□□□ -2.15
SCN11AQ9UI33 AC023790.1-201ENST00000482174 347 ntBASIC1.62□□□□□ -2.15
SCN11AQ9UI33 AC104685.1-201ENST00000502445 371 ntBASIC1.62□□□□□ -2.15
SCN11AQ9UI33 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.62□□□□□ -2.15
SCN11AQ9UI33 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC1.62□□□□□ -2.15
SCN11AQ9UI33 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC1.62□□□□□ -2.15
SCN11AQ9UI33 MTCYBP41-201ENST00000528913 1123 ntBASIC1.62□□□□□ -2.15
SCN11AQ9UI33 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.62□□□□□ -2.15
SCN11AQ9UI33 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.62□□□□□ -2.15
SCN11AQ9UI33 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.62□□□□□ -2.15
SCN11AQ9UI33 AL360085.1-201ENST00000604713 532 ntBASIC1.62□□□□□ -2.15
SCN11AQ9UI33 MIR98-201ENST00000606724 119 ntBASIC1.62□□□□□ -2.15
SCN11AQ9UI33 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.62□□□□□ -2.15
SCN11AQ9UI33 AL355816.1-201ENST00000607951 118 ntBASIC1.62□□□□□ -2.15
SCN11AQ9UI33 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
SCN11AQ9UI33 CKS1BP5-201ENST00000434172 273 ntBASIC1.61□□□□□ -2.15
SCN11AQ9UI33 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
SCN11AQ9UI33 AC078857.1-201ENST00000469870 667 ntBASIC1.61□□□□□ -2.15
SCN11AQ9UI33 AC105914.1-201ENST00000511798 226 ntBASIC1.61□□□□□ -2.15
SCN11AQ9UI33 AC008837.2-201ENST00000513076 418 ntBASIC1.61□□□□□ -2.15
SCN11AQ9UI33 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.61□□□□□ -2.15
SCN11AQ9UI33 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.6□□□□□ -2.15
SCN11AQ9UI33 RNU6-997P-201ENST00000384725 107 ntBASIC1.6□□□□□ -2.15
SCN11AQ9UI33 ZNF90P2-204ENST00000419323 1075 ntBASIC1.6□□□□□ -2.15
SCN11AQ9UI33 SDCBPP1-201ENST00000440192 890 ntBASIC1.6□□□□□ -2.15
SCN11AQ9UI33 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.6□□□□□ -2.15
SCN11AQ9UI33 SUMO2P6-201ENST00000505273 288 ntBASIC1.6□□□□□ -2.15
SCN11AQ9UI33 OR5BM1P-201ENST00000512021 366 ntBASIC1.6□□□□□ -2.15
SCN11AQ9UI33 NDUFS5P6-201ENST00000529136 295 ntBASIC1.6□□□□□ -2.15
SCN11AQ9UI33 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.6□□□□□ -2.15
SCN11AQ9UI33 AC090616.5-202ENST00000582111 297 ntBASIC1.6□□□□□ -2.15
SCN11AQ9UI33 AC135178.6-201ENST00000605314 398 ntBASIC1.6□□□□□ -2.15
SCN11AQ9UI33 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
SCN11AQ9UI33 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
SCN11AQ9UI33 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.6□□□□□ -2.15
SCN11AQ9UI33 RNU2-32P-201ENST00000411193 191 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms