Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 AL365440.1-201ENST00000436135 2167 ntBASIC3.46□□□□□ -1.85
SMARCAL1Q9NZC9 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.46□□□□□ -1.85
SMARCAL1Q9NZC9 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 AC093908.1-201ENST00000623125 8092 ntBASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 RNU6-600P-201ENST00000362524 99 ntBASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 RNU4-35P-201ENST00000362588 141 ntBASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 Y_RNA.248-201ENST00000364501 109 ntBASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 RNU6-282P-201ENST00000365357 103 ntBASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 Y_RNA.372-201ENST00000365599 102 ntBASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 MIR200C-201ENST00000384980 68 ntBASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 MIR591-201ENST00000385290 95 ntBASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 SNORD115-47-201ENST00000391226 86 ntBASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 CALM2P3-201ENST00000400429 449 ntBASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 RNA5SP229-201ENST00000410809 99 ntBASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 MTCYBP24-201ENST00000420387 1106 ntBASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 PIGFP2-201ENST00000421400 651 ntBASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 AC006548.1-201ENST00000427470 102 ntBASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 CYCSP4-201ENST00000429682 331 ntBASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 AL596276.1-201ENST00000434465 418 ntBASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 MTND4LP10-201ENST00000435146 291 ntBASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 UBE2V1P13-201ENST00000436983 439 ntBASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 PSPHP1-201ENST00000450062 261 ntBASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 C1DP4-201ENST00000455429 424 ntBASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 SNORD121B-201ENST00000458838 81 ntBASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 AL121769.1-201ENST00000469473 401 ntBASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 IGKV2-26-201ENST00000518305 343 ntBASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 AC026403.1-201ENST00000518938 295 ntBASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 AC134698.4-201ENST00000523451 826 ntBASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 AC103843.2-201ENST00000530523 682 ntBASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 AP003385.6-201ENST00000531603 374 ntBASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 SETP7-201ENST00000552169 453 ntBASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 ZNF519P2-201ENST00000557032 169 ntBASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 AC090616.5-202ENST00000582111 297 ntBASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 AL355812.1-201ENST00000603215 216 ntBASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 AC245014.2-201ENST00000603689 287 ntBASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 AC246785.4-201ENST00000605374 287 ntBASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 MIR98-201ENST00000606724 119 ntBASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 AC002550.2-201ENST00000621246 394 ntBASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 CR381572.1-201ENST00000625098 102 ntBASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 AL159972.1-201ENST00000625150 448 ntBASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 AC009902.3-201ENST00000606235 2172 ntBASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 AC093010.3-201ENST00000570269 15214 ntBASIC3.46□□□□□ -1.86
SMARCAL1Q9NZC9 ELF2P3-201ENST00000445099 1506 ntBASIC3.45□□□□□ -1.86
SMARCAL1Q9NZC9 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SMARCAL1Q9NZC9 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.45□□□□□ -1.86
SMARCAL1Q9NZC9 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SMARCAL1Q9NZC9 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SMARCAL1Q9NZC9 RNA5SP295-201ENST00000362655 121 ntBASIC3.45□□□□□ -1.86
SMARCAL1Q9NZC9 U3.6-201ENST00000363622 211 ntBASIC3.45□□□□□ -1.86
SMARCAL1Q9NZC9 RNU4-12P-201ENST00000365233 139 ntBASIC3.45□□□□□ -1.86
SMARCAL1Q9NZC9 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
SMARCAL1Q9NZC9 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
SMARCAL1Q9NZC9 Y_RNA.409-201ENST00000383990 98 ntBASIC3.45□□□□□ -1.86
SMARCAL1Q9NZC9 MIR218-2-201ENST00000385006 110 ntBASIC3.45□□□□□ -1.86
SMARCAL1Q9NZC9 MIR181A1-201ENST00000385026 110 ntBASIC3.45□□□□□ -1.86
SMARCAL1Q9NZC9 RNU6-780P-201ENST00000391030 104 ntBASIC3.45□□□□□ -1.86
SMARCAL1Q9NZC9 RNU4-55P-201ENST00000410731 137 ntBASIC3.45□□□□□ -1.86
SMARCAL1Q9NZC9 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.45□□□□□ -1.86
SMARCAL1Q9NZC9 RPS29P4-201ENST00000414733 161 ntBASIC3.45□□□□□ -1.86
SMARCAL1Q9NZC9 MTND3P17-201ENST00000416968 344 ntBASIC3.45□□□□□ -1.86
SMARCAL1Q9NZC9 RPS15AP12-201ENST00000419498 388 ntBASIC3.45□□□□□ -1.86
SMARCAL1Q9NZC9 AC069157.1-201ENST00000421749 137 ntBASIC3.45□□□□□ -1.86
SMARCAL1Q9NZC9 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.45□□□□□ -1.86
SMARCAL1Q9NZC9 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.45□□□□□ -1.86
SMARCAL1Q9NZC9 MTND3P21-201ENST00000433774 331 ntBASIC3.45□□□□□ -1.86
SMARCAL1Q9NZC9 CST9LP2-201ENST00000437612 320 ntBASIC3.45□□□□□ -1.86
SMARCAL1Q9NZC9 USP9YP15-201ENST00000442391 422 ntBASIC3.45□□□□□ -1.86
SMARCAL1Q9NZC9 RAC1P7-201ENST00000445367 377 ntBASIC3.45□□□□□ -1.86
SMARCAL1Q9NZC9 AC003071.1-201ENST00000451219 789 ntBASIC3.45□□□□□ -1.86
SMARCAL1Q9NZC9 AL359385.1-201ENST00000456509 365 ntBASIC3.45□□□□□ -1.86
SMARCAL1Q9NZC9 SNORA84-201ENST00000459229 133 ntBASIC3.45□□□□□ -1.86
SMARCAL1Q9NZC9 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.45□□□□□ -1.86
SMARCAL1Q9NZC9 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.45□□□□□ -1.86
SMARCAL1Q9NZC9 SETP2-201ENST00000553886 926 ntBASIC3.45□□□□□ -1.86
SMARCAL1Q9NZC9 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.45□□□□□ -1.86
SMARCAL1Q9NZC9 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.45□□□□□ -1.86
SMARCAL1Q9NZC9 AC234778.2-201ENST00000566241 354 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms