Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 KC877373.1-201ENST00000479066 408 ntBASIC2.52□□□□□ -2.01
KLHL28Q9NXS3 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.52□□□□□ -2.01
KLHL28Q9NXS3 EIF4EP3-201ENST00000498782 656 ntBASIC2.52□□□□□ -2.01
KLHL28Q9NXS3 RPL37P25-201ENST00000507308 276 ntBASIC2.52□□□□□ -2.01
KLHL28Q9NXS3 RNU6-150P-201ENST00000516237 95 ntBASIC2.52□□□□□ -2.01
KLHL28Q9NXS3 RNA5SP76-201ENST00000516277 87 ntBASIC2.52□□□□□ -2.01
KLHL28Q9NXS3 RNU6-840P-201ENST00000517275 65 ntBASIC2.52□□□□□ -2.01
KLHL28Q9NXS3 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.52□□□□□ -2.01
KLHL28Q9NXS3 AL391261.3-201ENST00000557194 520 ntBASIC2.52□□□□□ -2.01
KLHL28Q9NXS3 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.52□□□□□ -2.01
KLHL28Q9NXS3 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.52□□□□□ -2.01
KLHL28Q9NXS3 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.52□□□□□ -2.01
KLHL28Q9NXS3 AC007619.2-201ENST00000605743 379 ntBASIC2.52□□□□□ -2.01
KLHL28Q9NXS3 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.52□□□□□ -2.01
KLHL28Q9NXS3 PART1_2.1-201ENST00000612397 250 ntBASIC2.52□□□□□ -2.01
KLHL28Q9NXS3 MIR6733-201ENST00000635723 61 ntBASIC2.52□□□□□ -2.01
KLHL28Q9NXS3 MIR7515-201ENST00000637837 67 ntBASIC2.52□□□□□ -2.01
KLHL28Q9NXS3 AL136360.1-201ENST00000503377 1900 ntBASIC2.52□□□□□ -2.01
KLHL28Q9NXS3 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
KLHL28Q9NXS3 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.51□□□□□ -2.01
KLHL28Q9NXS3 AC093536.2-201ENST00000565257 1406 ntBASIC2.51□□□□□ -2.01
KLHL28Q9NXS3 AL355596.1-201ENST00000565399 3996 ntBASIC2.51□□□□□ -2.01
KLHL28Q9NXS3 AC131280.1-202ENST00000624067 4211 ntBASIC2.51□□□□□ -2.01
KLHL28Q9NXS3 DDX10P1-201ENST00000448545 1933 ntBASIC2.51□□□□□ -2.01
KLHL28Q9NXS3 FTLP6-201ENST00000355274 422 ntBASIC2.51□□□□□ -2.01
KLHL28Q9NXS3 MIR449A-201ENST00000362113 91 ntBASIC2.51□□□□□ -2.01
KLHL28Q9NXS3 SNORD116-12-201ENST00000384468 92 ntBASIC2.51□□□□□ -2.01
KLHL28Q9NXS3 AL513475.1-201ENST00000406602 315 ntBASIC2.51□□□□□ -2.01
KLHL28Q9NXS3 AC098614.2-201ENST00000426040 255 ntBASIC2.51□□□□□ -2.01
KLHL28Q9NXS3 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.51□□□□□ -2.01
KLHL28Q9NXS3 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC2.51□□□□□ -2.01
KLHL28Q9NXS3 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.51□□□□□ -2.01
KLHL28Q9NXS3 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.51□□□□□ -2.01
KLHL28Q9NXS3 ZNF886P-201ENST00000450781 723 ntBASIC2.51□□□□□ -2.01
KLHL28Q9NXS3 AC008571.1-201ENST00000467232 300 ntBASIC2.51□□□□□ -2.01
KLHL28Q9NXS3 AC104563.1-201ENST00000476147 376 ntBASIC2.51□□□□□ -2.01
KLHL28Q9NXS3 AC126182.1-201ENST00000478134 357 ntBASIC2.51□□□□□ -2.01
KLHL28Q9NXS3 AC022447.3-201ENST00000506865 495 ntBASIC2.51□□□□□ -2.01
KLHL28Q9NXS3 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.51□□□□□ -2.01
KLHL28Q9NXS3 MTND5P4-201ENST00000514978 288 ntBASIC2.51□□□□□ -2.01
KLHL28Q9NXS3 NRON-201ENST00000517270 370 ntBASIC2.51□□□□□ -2.01
KLHL28Q9NXS3 AC091163.3-201ENST00000518269 1144 ntBASIC2.51□□□□□ -2.01
KLHL28Q9NXS3 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
KLHL28Q9NXS3 AC087276.1-201ENST00000529659 480 ntBASIC2.51□□□□□ -2.01
KLHL28Q9NXS3 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
KLHL28Q9NXS3 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.51□□□□□ -2.01
KLHL28Q9NXS3 OR4K7P-201ENST00000580232 945 ntBASIC2.51□□□□□ -2.01
KLHL28Q9NXS3 DNAJC19P3-201ENST00000594491 331 ntBASIC2.51□□□□□ -2.01
KLHL28Q9NXS3 BNIP3P31-201ENST00000604515 566 ntBASIC2.51□□□□□ -2.01
KLHL28Q9NXS3 AC009268.2-201ENST00000621925 457 ntBASIC2.51□□□□□ -2.01
KLHL28Q9NXS3 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.51□□□□□ -2.01
KLHL28Q9NXS3 AP002371.2-201ENST00000624450 503 ntBASIC2.51□□□□□ -2.01
KLHL28Q9NXS3 AC079228.1-201ENST00000624774 1049 ntBASIC2.51□□□□□ -2.01
KLHL28Q9NXS3 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.51□□□□□ -2.01
KLHL28Q9NXS3 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
KLHL28Q9NXS3 AL138713.1-201ENST00000624026 2130 ntBASIC2.51□□□□□ -2.01
KLHL28Q9NXS3 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.51□□□□□ -2.01
KLHL28Q9NXS3 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
KLHL28Q9NXS3 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
KLHL28Q9NXS3 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.5□□□□□ -2.01
KLHL28Q9NXS3 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
KLHL28Q9NXS3 RNU6-621P-201ENST00000364752 109 ntBASIC2.5□□□□□ -2.01
KLHL28Q9NXS3 RNU6-1072P-201ENST00000384703 107 ntBASIC2.5□□□□□ -2.01
KLHL28Q9NXS3 RNU6-114P-201ENST00000384704 105 ntBASIC2.5□□□□□ -2.01
KLHL28Q9NXS3 RNU6-443P-201ENST00000384780 107 ntBASIC2.5□□□□□ -2.01
KLHL28Q9NXS3 RNU6-754P-201ENST00000391166 107 ntBASIC2.5□□□□□ -2.01
KLHL28Q9NXS3 AL356421.1-201ENST00000403255 413 ntBASIC2.5□□□□□ -2.01
KLHL28Q9NXS3 RPS4XP7-201ENST00000406274 780 ntBASIC2.5□□□□□ -2.01
KLHL28Q9NXS3 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
KLHL28Q9NXS3 RNU2-33P-201ENST00000410344 192 ntBASIC2.5□□□□□ -2.01
KLHL28Q9NXS3 RNA5SP184-201ENST00000411071 108 ntBASIC2.5□□□□□ -2.01
KLHL28Q9NXS3 MTND1P21-201ENST00000412991 285 ntBASIC2.5□□□□□ -2.01
KLHL28Q9NXS3 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.5□□□□□ -2.01
KLHL28Q9NXS3 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.5□□□□□ -2.01
KLHL28Q9NXS3 AL513175.2-201ENST00000422071 443 ntBASIC2.5□□□□□ -2.01
KLHL28Q9NXS3 AL953862.1-201ENST00000423016 168 ntBASIC2.5□□□□□ -2.01
KLHL28Q9NXS3 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.5□□□□□ -2.01
KLHL28Q9NXS3 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.5□□□□□ -2.01
KLHL28Q9NXS3 AC104389.3-201ENST00000445629 235 ntBASIC2.5□□□□□ -2.01
KLHL28Q9NXS3 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.5□□□□□ -2.01
KLHL28Q9NXS3 AC133134.1-201ENST00000466800 359 ntBASIC2.5□□□□□ -2.01
KLHL28Q9NXS3 RPS20P22-201ENST00000473700 357 ntBASIC2.5□□□□□ -2.01
KLHL28Q9NXS3 RPL9P33-201ENST00000484311 566 ntBASIC2.5□□□□□ -2.01
KLHL28Q9NXS3 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.5□□□□□ -2.01
KLHL28Q9NXS3 AC090096.1-201ENST00000489168 390 ntBASIC2.5□□□□□ -2.01
KLHL28Q9NXS3 SUMO2P6-201ENST00000505273 288 ntBASIC2.5□□□□□ -2.01
KLHL28Q9NXS3 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.5□□□□□ -2.01
KLHL28Q9NXS3 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.5□□□□□ -2.01
KLHL28Q9NXS3 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.5□□□□□ -2.01
KLHL28Q9NXS3 RNU6-826P-201ENST00000516827 104 ntBASIC2.5□□□□□ -2.01
KLHL28Q9NXS3 RNA5SP291-201ENST00000517222 105 ntBASIC2.5□□□□□ -2.01
KLHL28Q9NXS3 SUB1P1-201ENST00000524415 382 ntBASIC2.5□□□□□ -2.01
KLHL28Q9NXS3 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
KLHL28Q9NXS3 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
KLHL28Q9NXS3 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.5□□□□□ -2.01
KLHL28Q9NXS3 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC2.5□□□□□ -2.01
KLHL28Q9NXS3 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
KLHL28Q9NXS3 AC027807.1-201ENST00000559921 996 ntBASIC2.5□□□□□ -2.01
KLHL28Q9NXS3 AC087465.1-201ENST00000560574 245 ntBASIC2.5□□□□□ -2.01
KLHL28Q9NXS3 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms