Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 SUMO1P4-201ENST00000429430 302 ntBASIC2.24□□□□□ -2.05
CLN6Q9NWW5 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC2.24□□□□□ -2.05
CLN6Q9NWW5 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.24□□□□□ -2.05
CLN6Q9NWW5 AL445687.1-201ENST00000439946 251 ntBASIC2.24□□□□□ -2.05
CLN6Q9NWW5 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC2.24□□□□□ -2.05
CLN6Q9NWW5 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.24□□□□□ -2.05
CLN6Q9NWW5 snoU13.22-201ENST00000459428 104 ntBASIC2.24□□□□□ -2.05
CLN6Q9NWW5 MRPS17P3-201ENST00000465453 385 ntBASIC2.24□□□□□ -2.05
CLN6Q9NWW5 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.24□□□□□ -2.05
CLN6Q9NWW5 NRON-201ENST00000517270 370 ntBASIC2.24□□□□□ -2.05
CLN6Q9NWW5 AP003467.2-201ENST00000520175 319 ntBASIC2.24□□□□□ -2.05
CLN6Q9NWW5 AC021451.1-201ENST00000523498 1129 ntBASIC2.24□□□□□ -2.05
CLN6Q9NWW5 ATP5F1P5-201ENST00000526403 760 ntBASIC2.24□□□□□ -2.05
CLN6Q9NWW5 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.24□□□□□ -2.05
CLN6Q9NWW5 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.24□□□□□ -2.05
CLN6Q9NWW5 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.24□□□□□ -2.05
CLN6Q9NWW5 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.24□□□□□ -2.05
CLN6Q9NWW5 MIR3117-201ENST00000584034 78 ntBASIC2.24□□□□□ -2.05
CLN6Q9NWW5 AC010133.1-201ENST00000615809 842 ntBASIC2.24□□□□□ -2.05
CLN6Q9NWW5 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.24□□□□□ -2.05
CLN6Q9NWW5 LINC02211-204ENST00000642024 1070 ntBASIC2.24□□□□□ -2.05
CLN6Q9NWW5 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
CLN6Q9NWW5 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CLN6Q9NWW5 FTLP6-201ENST00000355274 422 ntBASIC2.23□□□□□ -2.05
CLN6Q9NWW5 MIRLET7G-201ENST00000362280 84 ntBASIC2.23□□□□□ -2.05
CLN6Q9NWW5 Y_RNA.472-201ENST00000384322 102 ntBASIC2.23□□□□□ -2.05
CLN6Q9NWW5 RNU6-1072P-201ENST00000384703 107 ntBASIC2.23□□□□□ -2.05
CLN6Q9NWW5 RNU6-443P-201ENST00000384780 107 ntBASIC2.23□□□□□ -2.05
CLN6Q9NWW5 AL360182.1-201ENST00000397433 468 ntBASIC2.23□□□□□ -2.05
CLN6Q9NWW5 MIR1284-201ENST00000408337 120 ntBASIC2.23□□□□□ -2.05
CLN6Q9NWW5 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.23□□□□□ -2.05
CLN6Q9NWW5 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.23□□□□□ -2.05
CLN6Q9NWW5 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.23□□□□□ -2.05
CLN6Q9NWW5 UBE2V1P13-201ENST00000436983 439 ntBASIC2.23□□□□□ -2.05
CLN6Q9NWW5 OR10R1P-201ENST00000441524 1141 ntBASIC2.23□□□□□ -2.05
CLN6Q9NWW5 AC104978.1-201ENST00000449387 391 ntBASIC2.23□□□□□ -2.05
CLN6Q9NWW5 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.23□□□□□ -2.05
CLN6Q9NWW5 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.23□□□□□ -2.05
CLN6Q9NWW5 RPL26P9-201ENST00000457466 433 ntBASIC2.23□□□□□ -2.05
CLN6Q9NWW5 MEMO1P3-201ENST00000459811 302 ntBASIC2.23□□□□□ -2.05
CLN6Q9NWW5 S100A11P2-201ENST00000467589 312 ntBASIC2.23□□□□□ -2.05
CLN6Q9NWW5 AC105252.1-201ENST00000503089 286 ntBASIC2.23□□□□□ -2.05
CLN6Q9NWW5 RPL37P25-201ENST00000507308 276 ntBASIC2.23□□□□□ -2.05
CLN6Q9NWW5 AC096725.1-201ENST00000514266 313 ntBASIC2.23□□□□□ -2.05
CLN6Q9NWW5 RNA5SP367-201ENST00000516557 118 ntBASIC2.23□□□□□ -2.05
CLN6Q9NWW5 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.23□□□□□ -2.05
CLN6Q9NWW5 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.23□□□□□ -2.05
CLN6Q9NWW5 PRELID2P1-201ENST00000552837 301 ntBASIC2.23□□□□□ -2.05
CLN6Q9NWW5 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.23□□□□□ -2.05
CLN6Q9NWW5 OR4K7P-201ENST00000580232 945 ntBASIC2.23□□□□□ -2.05
CLN6Q9NWW5 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.23□□□□□ -2.05
CLN6Q9NWW5 MTND4LP5-201ENST00000605152 292 ntBASIC2.23□□□□□ -2.05
CLN6Q9NWW5 AL139344.1-201ENST00000605228 195 ntBASIC2.23□□□□□ -2.05
CLN6Q9NWW5 MTND1P37-201ENST00000636562 264 ntBASIC2.23□□□□□ -2.05
CLN6Q9NWW5 AC013437.2-201ENST00000639587 677 ntBASIC2.23□□□□□ -2.05
CLN6Q9NWW5 AL359693.1-201ENST00000614959 2407 ntBASIC2.23□□□□□ -2.05
CLN6Q9NWW5 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.23□□□□□ -2.05
CLN6Q9NWW5 AC093536.2-201ENST00000565257 1406 ntBASIC2.23□□□□□ -2.05
CLN6Q9NWW5 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.23□□□□□ -2.05
CLN6Q9NWW5 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CLN6Q9NWW5 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.23□□□□□ -2.05
CLN6Q9NWW5 AC011477.1-204ENST00000623416 1325 ntBASIC2.22□□□□□ -2.05
CLN6Q9NWW5 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
CLN6Q9NWW5 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CLN6Q9NWW5 MIR21-201ENST00000362134 72 ntBASIC2.22□□□□□ -2.05
CLN6Q9NWW5 RNU6-560P-201ENST00000364007 108 ntBASIC2.22□□□□□ -2.05
CLN6Q9NWW5 SNORD114-30-201ENST00000364448 72 ntBASIC2.22□□□□□ -2.05
CLN6Q9NWW5 RNU6-413P-201ENST00000384115 107 ntBASIC2.22□□□□□ -2.05
CLN6Q9NWW5 SNORA80E-201ENST00000384744 137 ntBASIC2.22□□□□□ -2.05
CLN6Q9NWW5 TXNP7-201ENST00000406296 293 ntBASIC2.22□□□□□ -2.05
CLN6Q9NWW5 AL513331.1-201ENST00000411908 397 ntBASIC2.22□□□□□ -2.05
CLN6Q9NWW5 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.22□□□□□ -2.05
CLN6Q9NWW5 AL451054.2-201ENST00000420896 202 ntBASIC2.22□□□□□ -2.05
CLN6Q9NWW5 AL953862.1-201ENST00000423016 168 ntBASIC2.22□□□□□ -2.05
CLN6Q9NWW5 USP9YP11-201ENST00000427537 717 ntBASIC2.22□□□□□ -2.05
CLN6Q9NWW5 RPS15AP5-201ENST00000436276 388 ntBASIC2.22□□□□□ -2.05
CLN6Q9NWW5 Z80107.1-201ENST00000436830 412 ntBASIC2.22□□□□□ -2.05
CLN6Q9NWW5 SNRPEP7-201ENST00000438350 220 ntBASIC2.22□□□□□ -2.05
CLN6Q9NWW5 AC104389.3-201ENST00000445629 235 ntBASIC2.22□□□□□ -2.05
CLN6Q9NWW5 AC009961.3-201ENST00000449832 765 ntBASIC2.22□□□□□ -2.05
CLN6Q9NWW5 RPL12P25-201ENST00000455592 494 ntBASIC2.22□□□□□ -2.05
CLN6Q9NWW5 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.22□□□□□ -2.05
CLN6Q9NWW5 RPL36AP51-201ENST00000487216 318 ntBASIC2.22□□□□□ -2.05
CLN6Q9NWW5 EIF4EP3-201ENST00000498782 656 ntBASIC2.22□□□□□ -2.05
CLN6Q9NWW5 AC024589.1-201ENST00000512207 263 ntBASIC2.22□□□□□ -2.05
CLN6Q9NWW5 RNU1-104P-201ENST00000517280 175 ntBASIC2.22□□□□□ -2.05
CLN6Q9NWW5 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.22□□□□□ -2.05
CLN6Q9NWW5 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
CLN6Q9NWW5 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.22□□□□□ -2.05
CLN6Q9NWW5 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.22□□□□□ -2.05
CLN6Q9NWW5 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.22□□□□□ -2.05
CLN6Q9NWW5 BNIP3P27-201ENST00000599991 412 ntBASIC2.22□□□□□ -2.05
CLN6Q9NWW5 FTX_3.1-201ENST00000610451 147 ntBASIC2.22□□□□□ -2.05
CLN6Q9NWW5 SDR42E1P2-201ENST00000614861 481 ntBASIC2.22□□□□□ -2.05
CLN6Q9NWW5 U4.3-201ENST00000621047 82 ntBASIC2.22□□□□□ -2.05
CLN6Q9NWW5 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.22□□□□□ -2.05
CLN6Q9NWW5 AC106858.1-201ENST00000637497 429 ntBASIC2.22□□□□□ -2.05
CLN6Q9NWW5 MIR7515-201ENST00000637837 67 ntBASIC2.22□□□□□ -2.05
CLN6Q9NWW5 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.22□□□□□ -2.05
CLN6Q9NWW5 AL137003.2-201ENST00000606924 2538 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms