Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
ATG3Q9NT62 RNA5SP387-201ENST00000364226 106 ntBASIC5.4□□□□□ -1.54
ATG3Q9NT62 SNORA73.2-201ENST00000364946 201 ntBASIC5.4□□□□□ -1.54
ATG3Q9NT62 RNU6-1062P-201ENST00000383908 107 ntBASIC5.4□□□□□ -1.54
ATG3Q9NT62 AL078604.1-201ENST00000404609 466 ntBASIC5.4□□□□□ -1.54
ATG3Q9NT62 AL606923.1-201ENST00000406616 190 ntBASIC5.4□□□□□ -1.54
ATG3Q9NT62 RNA5SP146-201ENST00000410743 123 ntBASIC5.4□□□□□ -1.54
ATG3Q9NT62 AC080125.1-201ENST00000414888 684 ntBASIC5.4□□□□□ -1.54
ATG3Q9NT62 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC5.4□□□□□ -1.54
ATG3Q9NT62 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
ATG3Q9NT62 AL049714.1-201ENST00000466686 347 ntBASIC5.4□□□□□ -1.54
ATG3Q9NT62 AC128713.1-201ENST00000471495 306 ntBASIC5.4□□□□□ -1.54
ATG3Q9NT62 AC104563.1-201ENST00000476147 376 ntBASIC5.4□□□□□ -1.54
ATG3Q9NT62 AC104164.2-201ENST00000496953 495 ntBASIC5.4□□□□□ -1.54
ATG3Q9NT62 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.4□□□□□ -1.54
ATG3Q9NT62 RPL39P5-202ENST00000512505 151 ntBASIC5.4□□□□□ -1.54
ATG3Q9NT62 RNU6-488P-201ENST00000515918 99 ntBASIC5.4□□□□□ -1.54
ATG3Q9NT62 AC109635.4-202ENST00000531666 412 ntBASIC5.4□□□□□ -1.54
ATG3Q9NT62 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC5.4□□□□□ -1.54
ATG3Q9NT62 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.54
ATG3Q9NT62 AC124068.1-201ENST00000563131 678 ntBASIC5.4□□□□□ -1.54
ATG3Q9NT62 MIR3672-201ENST00000584290 82 ntBASIC5.4□□□□□ -1.54
ATG3Q9NT62 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC5.4□□□□□ -1.54
ATG3Q9NT62 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC5.4□□□□□ -1.54
ATG3Q9NT62 AC016727.2-201ENST00000603988 621 ntBASIC5.4□□□□□ -1.54
ATG3Q9NT62 AC104695.3-201ENST00000604052 296 ntBASIC5.4□□□□□ -1.54
ATG3Q9NT62 AL592436.1-201ENST00000605135 558 ntBASIC5.4□□□□□ -1.54
ATG3Q9NT62 AC062037.2-201ENST00000610137 73 ntBASIC5.4□□□□□ -1.54
ATG3Q9NT62 AC012409.4-201ENST00000612923 249 ntBASIC5.4□□□□□ -1.54
ATG3Q9NT62 AL121772.2-201ENST00000614331 297 ntBASIC5.4□□□□□ -1.54
ATG3Q9NT62 AC098657.3-201ENST00000620434 263 ntBASIC5.4□□□□□ -1.54
ATG3Q9NT62 TEX41-300ENST00000631048 69 ntTSL 5 BASIC5.4□□□□□ -1.54
ATG3Q9NT62 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
ATG3Q9NT62 AC016588.2-201ENST00000632484 3021 ntBASIC5.4□□□□□ -1.55
ATG3Q9NT62 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
ATG3Q9NT62 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.55
ATG3Q9NT62 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.55
ATG3Q9NT62 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
ATG3Q9NT62 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ATG3Q9NT62 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.39□□□□□ -1.55
ATG3Q9NT62 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.39□□□□□ -1.55
ATG3Q9NT62 AL672167.1-205ENST00000641112 3080 ntBASIC5.39□□□□□ -1.55
ATG3Q9NT62 ACEA_U3.1-201ENST00000363057 217 ntBASIC5.39□□□□□ -1.55
ATG3Q9NT62 Y_RNA.645-201ENST00000391229 102 ntBASIC5.39□□□□□ -1.55
ATG3Q9NT62 EIF5P1-201ENST00000400019 1231 ntBASIC5.39□□□□□ -1.55
ATG3Q9NT62 RNU2-36P-201ENST00000410361 191 ntBASIC5.39□□□□□ -1.55
ATG3Q9NT62 RN7SKP167-201ENST00000411047 285 ntBASIC5.39□□□□□ -1.55
ATG3Q9NT62 RNU6-954P-201ENST00000411355 107 ntBASIC5.39□□□□□ -1.55
ATG3Q9NT62 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC5.39□□□□□ -1.55
ATG3Q9NT62 AC012065.2-201ENST00000421295 375 ntBASIC5.39□□□□□ -1.55
ATG3Q9NT62 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC5.39□□□□□ -1.55
ATG3Q9NT62 MTATP6P16-201ENST00000434543 526 ntBASIC5.39□□□□□ -1.55
ATG3Q9NT62 YWHAZP8-201ENST00000436935 731 ntBASIC5.39□□□□□ -1.55
ATG3Q9NT62 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC5.39□□□□□ -1.55
ATG3Q9NT62 AL118520.1-201ENST00000450770 291 ntBASIC5.39□□□□□ -1.55
ATG3Q9NT62 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC5.39□□□□□ -1.55
ATG3Q9NT62 RNU7-180P-201ENST00000459240 63 ntBASIC5.39□□□□□ -1.55
ATG3Q9NT62 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC5.39□□□□□ -1.55
ATG3Q9NT62 RPS29P19-201ENST00000479709 171 ntBASIC5.39□□□□□ -1.55
ATG3Q9NT62 RPS27P27-201ENST00000498779 255 ntBASIC5.39□□□□□ -1.55
ATG3Q9NT62 HMGB3P17-201ENST00000504195 649 ntBASIC5.39□□□□□ -1.55
ATG3Q9NT62 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC5.39□□□□□ -1.55
ATG3Q9NT62 RNU6-1143P-201ENST00000516125 104 ntBASIC5.39□□□□□ -1.55
ATG3Q9NT62 AP000857.1-201ENST00000532151 543 ntBASIC5.39□□□□□ -1.55
ATG3Q9NT62 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC5.39□□□□□ -1.55
ATG3Q9NT62 OR6R2P-201ENST00000609216 300 ntBASIC5.39□□□□□ -1.55
ATG3Q9NT62 AC004696.1-201ENST00000614345 607 ntBASIC5.39□□□□□ -1.55
ATG3Q9NT62 MIR6864-201ENST00000617935 70 ntBASIC5.39□□□□□ -1.55
ATG3Q9NT62 U2.1-201ENST00000618978 145 ntBASIC5.39□□□□□ -1.55
ATG3Q9NT62 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
ATG3Q9NT62 AC005086.4-201ENST00000623065 213 ntBASIC5.39□□□□□ -1.55
ATG3Q9NT62 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
ATG3Q9NT62 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
ATG3Q9NT62 MFF-206ENST00000392059 1710 ntTSL 5 BASIC5.39□□□□□ -1.55
ATG3Q9NT62 AL672167.1-203ENST00000641299 2975 ntBASIC5.39□□□□□ -1.55
ATG3Q9NT62 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.39□□□□□ -1.55
ATG3Q9NT62 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.39□□□□□ -1.55
ATG3Q9NT62 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC5.39□□□□□ -1.55
ATG3Q9NT62 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.38□□□□□ -1.55
ATG3Q9NT62 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
ATG3Q9NT62 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.38□□□□□ -1.55
ATG3Q9NT62 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
ATG3Q9NT62 SAGE2P-201ENST00000420011 2126 ntBASIC5.38□□□□□ -1.55
ATG3Q9NT62 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.38□□□□□ -1.55
ATG3Q9NT62 AL139276.1-201ENST00000311910 1001 ntBASIC5.38□□□□□ -1.55
ATG3Q9NT62 Y_RNA.455-201ENST00000384230 98 ntBASIC5.38□□□□□ -1.55
ATG3Q9NT62 Y_RNA.463-201ENST00000384271 102 ntBASIC5.38□□□□□ -1.55
ATG3Q9NT62 MIR454-201ENST00000390180 115 ntBASIC5.38□□□□□ -1.55
ATG3Q9NT62 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.38□□□□□ -1.55
ATG3Q9NT62 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.38□□□□□ -1.55
ATG3Q9NT62 AC093151.1-201ENST00000427711 313 ntBASIC5.38□□□□□ -1.55
ATG3Q9NT62 ARL5AP4-201ENST00000430731 512 ntBASIC5.38□□□□□ -1.55
ATG3Q9NT62 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC5.38□□□□□ -1.55
ATG3Q9NT62 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC5.38□□□□□ -1.55
ATG3Q9NT62 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC5.38□□□□□ -1.55
ATG3Q9NT62 PCNPP5-201ENST00000452246 481 ntBASIC5.38□□□□□ -1.55
ATG3Q9NT62 NANOGP10-201ENST00000453325 895 ntBASIC5.38□□□□□ -1.55
ATG3Q9NT62 ALDH7A1P3-201ENST00000492517 345 ntBASIC5.38□□□□□ -1.55
ATG3Q9NT62 SOD1P3-201ENST00000518682 454 ntBASIC5.38□□□□□ -1.55
ATG3Q9NT62 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms