Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.1□□□□□ -2.23
CDC42SE1Q9NRR8 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC1.1□□□□□ -2.23
CDC42SE1Q9NRR8 AP001189.2-201ENST00000527320 189 ntBASIC1.1□□□□□ -2.23
CDC42SE1Q9NRR8 AP003497.1-201ENST00000528472 562 ntBASIC1.1□□□□□ -2.23
CDC42SE1Q9NRR8 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC1.1□□□□□ -2.23
CDC42SE1Q9NRR8 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.1□□□□□ -2.23
CDC42SE1Q9NRR8 DUXAP1-201ENST00000556632 463 ntBASIC1.1□□□□□ -2.23
CDC42SE1Q9NRR8 AC027176.1-201ENST00000560204 514 ntBASIC1.1□□□□□ -2.23
CDC42SE1Q9NRR8 MIR1269B-201ENST00000580405 75 ntBASIC1.1□□□□□ -2.23
CDC42SE1Q9NRR8 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC1.1□□□□□ -2.23
CDC42SE1Q9NRR8 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.1□□□□□ -2.23
CDC42SE1Q9NRR8 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC1.1□□□□□ -2.23
CDC42SE1Q9NRR8 OR7E18P-201ENST00000592589 702 ntBASIC1.1□□□□□ -2.23
CDC42SE1Q9NRR8 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC1.1□□□□□ -2.23
CDC42SE1Q9NRR8 AL138963.2-201ENST00000605137 226 ntBASIC1.1□□□□□ -2.23
CDC42SE1Q9NRR8 AC069304.2-201ENST00000605154 435 ntBASIC1.1□□□□□ -2.23
CDC42SE1Q9NRR8 AC004805.2-201ENST00000605382 482 ntBASIC1.1□□□□□ -2.23
CDC42SE1Q9NRR8 AL161616.1-201ENST00000611867 286 ntBASIC1.1□□□□□ -2.23
CDC42SE1Q9NRR8 AC022202.1-201ENST00000613515 211 ntBASIC1.1□□□□□ -2.23
CDC42SE1Q9NRR8 AL773524.1-201ENST00000614065 229 ntBASIC1.1□□□□□ -2.23
CDC42SE1Q9NRR8 MIR6780A-201ENST00000615089 68 ntBASIC1.1□□□□□ -2.23
CDC42SE1Q9NRR8 AC003001.2-201ENST00000616294 831 ntBASIC1.1□□□□□ -2.23
CDC42SE1Q9NRR8 AC091953.3-201ENST00000623220 236 ntBASIC1.1□□□□□ -2.23
CDC42SE1Q9NRR8 AP002791.1-201ENST00000623291 381 ntBASIC1.1□□□□□ -2.23
CDC42SE1Q9NRR8 AC109454.4-201ENST00000623411 649 ntBASIC1.1□□□□□ -2.23
CDC42SE1Q9NRR8 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.1□□□□□ -2.23
CDC42SE1Q9NRR8 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.1□□□□□ -2.23
CDC42SE1Q9NRR8 HPVC1-201ENST00000629899 1198 ntBASIC1.1□□□□□ -2.23
CDC42SE1Q9NRR8 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.1□□□□□ -2.23
CDC42SE1Q9NRR8 DLD-214ENST00000639772 421 ntTSL 5 BASIC1.1□□□□□ -2.23
CDC42SE1Q9NRR8 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
CDC42SE1Q9NRR8 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
CDC42SE1Q9NRR8 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC1.1□□□□□ -2.23
CDC42SE1Q9NRR8 MTCO1P4-201ENST00000520516 1409 ntBASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 Y_RNA.209-201ENST00000364156 111 ntBASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 RNA5-8SP4-201ENST00000365096 150 ntBASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 XGY1-201ENST00000381172 446 ntBASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 OR5H15-201ENST00000383696 930 ntBASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 RNU6-637P-201ENST00000384050 107 ntBASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 AC007066.1-201ENST00000392902 381 ntBASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 MCTS2P-201ENST00000394552 546 ntBASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 OR9R1P-201ENST00000412200 877 ntBASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 TPMTP2-201ENST00000414372 726 ntBASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 AL356095.1-201ENST00000417217 199 ntBASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 ELOCP14-201ENST00000428070 331 ntBASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 AC022018.1-201ENST00000430685 241 ntBASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 Z98742.2-201ENST00000431564 187 ntBASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 RSL24D1P8-201ENST00000434442 492 ntBASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 MTND1P28-201ENST00000435623 950 ntBASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 FABP5P14-201ENST00000437273 393 ntBASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 ELOCP7-201ENST00000439968 331 ntBASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 RPS24P13-201ENST00000442520 397 ntBASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 HMGN1P2-201ENST00000445197 310 ntBASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 HMGN2P10-201ENST00000448085 265 ntBASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 AL513533.1-201ENST00000453728 415 ntBASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 PPP1R2P5-201ENST00000457256 603 ntBASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 RPL30P9-201ENST00000465586 330 ntBASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 AC109925.1-201ENST00000478069 331 ntBASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 AC079203.1-201ENST00000487972 404 ntBASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 FTH1P21-201ENST00000512179 511 ntBASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 RNA5SP137-201ENST00000516833 135 ntBASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 RNU6-714P-201ENST00000516963 103 ntBASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 MTCO2P15-201ENST00000532655 656 ntBASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 AC006199.1-201ENST00000548728 219 ntBASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 CCNG2P1-201ENST00000549521 1000 ntBASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 AC021739.1-201ENST00000559631 174 ntBASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 LINC00557-201ENST00000563184 1279 ntBASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 ROCK1P1-201ENST00000573767 549 ntBASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 MIR4646-201ENST00000580775 63 ntBASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 UBL5P2-201ENST00000583788 219 ntBASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 MIR4765-201ENST00000585007 77 ntBASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 NRBF2P1-201ENST00000587407 859 ntBASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 AC002545.1-201ENST00000592511 181 ntBASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 AP001542.2-201ENST00000593141 364 ntBASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 VN1R92P-201ENST00000598511 928 ntBASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 SUMO2P15-201ENST00000604285 278 ntBASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 AC107294.1-201ENST00000609524 467 ntBASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 uc_338.14-201ENST00000613162 166 ntBASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 AC008759.3-201ENST00000613300 508 ntBASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 AL445264.1-201ENST00000621719 171 ntBASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
CDC42SE1Q9NRR8 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
CDC42SE1Q9NRR8 ZNF285B-201ENST00000561698 1767 ntBASIC1.08□□□□□ -2.24
CDC42SE1Q9NRR8 AC009487.4-201ENST00000624969 3585 ntBASIC1.08□□□□□ -2.24
CDC42SE1Q9NRR8 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.08□□□□□ -2.24
CDC42SE1Q9NRR8 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.08□□□□□ -2.24
CDC42SE1Q9NRR8 RNU6-486P-201ENST00000363116 107 ntBASIC1.08□□□□□ -2.24
CDC42SE1Q9NRR8 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC1.08□□□□□ -2.24
CDC42SE1Q9NRR8 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms