Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 AC087241.2-201ENST00000535801 324 ntBASIC4.69□□□□□ -1.66
CCDC113Q9H0I3 AC006064.5-201ENST00000541782 248 ntBASIC4.69□□□□□ -1.66
CCDC113Q9H0I3 AC037471.2-201ENST00000564941 598 ntBASIC4.69□□□□□ -1.66
CCDC113Q9H0I3 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC113Q9H0I3 AC243960.4-201ENST00000600532 288 ntBASIC4.69□□□□□ -1.66
CCDC113Q9H0I3 AC022893.3-201ENST00000607665 437 ntBASIC4.69□□□□□ -1.66
CCDC113Q9H0I3 MIR7154-201ENST00000620673 73 ntBASIC4.69□□□□□ -1.66
CCDC113Q9H0I3 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CCDC113Q9H0I3 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
CCDC113Q9H0I3 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC113Q9H0I3 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC113Q9H0I3 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
CCDC113Q9H0I3 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC113Q9H0I3 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC113Q9H0I3 Y_RNA.11-201ENST00000362375 109 ntBASIC4.68□□□□□ -1.66
CCDC113Q9H0I3 Y_RNA.61-201ENST00000362835 102 ntBASIC4.68□□□□□ -1.66
CCDC113Q9H0I3 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
CCDC113Q9H0I3 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
CCDC113Q9H0I3 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC113Q9H0I3 RPS12P24-201ENST00000412619 387 ntBASIC4.68□□□□□ -1.66
CCDC113Q9H0I3 AC092809.3-201ENST00000415453 231 ntBASIC4.68□□□□□ -1.66
CCDC113Q9H0I3 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.68□□□□□ -1.66
CCDC113Q9H0I3 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC113Q9H0I3 IFNA20P-201ENST00000436840 528 ntBASIC4.68□□□□□ -1.66
CCDC113Q9H0I3 TXNP1-201ENST00000441872 371 ntBASIC4.68□□□□□ -1.66
CCDC113Q9H0I3 AC104058.1-201ENST00000448028 297 ntBASIC4.68□□□□□ -1.66
CCDC113Q9H0I3 ABCF2P2-201ENST00000450549 296 ntBASIC4.68□□□□□ -1.66
CCDC113Q9H0I3 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.68□□□□□ -1.66
CCDC113Q9H0I3 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC113Q9H0I3 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC113Q9H0I3 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC113Q9H0I3 PARP4P3-201ENST00000510265 317 ntBASIC4.68□□□□□ -1.66
CCDC113Q9H0I3 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.68□□□□□ -1.66
CCDC113Q9H0I3 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.68□□□□□ -1.66
CCDC113Q9H0I3 SNORA31.3-201ENST00000516029 96 ntBASIC4.68□□□□□ -1.66
CCDC113Q9H0I3 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.68□□□□□ -1.66
CCDC113Q9H0I3 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC113Q9H0I3 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC113Q9H0I3 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC113Q9H0I3 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC113Q9H0I3 RN7SL600P-201ENST00000581811 299 ntBASIC4.68□□□□□ -1.66
CCDC113Q9H0I3 VN1R80P-201ENST00000597126 338 ntBASIC4.68□□□□□ -1.66
CCDC113Q9H0I3 AC020910.2-201ENST00000603635 610 ntBASIC4.68□□□□□ -1.66
CCDC113Q9H0I3 AL138721.1-201ENST00000616756 179 ntBASIC4.68□□□□□ -1.66
CCDC113Q9H0I3 MIR8059-201ENST00000620427 81 ntBASIC4.68□□□□□ -1.66
CCDC113Q9H0I3 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC113Q9H0I3 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
CCDC113Q9H0I3 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC113Q9H0I3 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC113Q9H0I3 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC113Q9H0I3 SNORD81.2-201ENST00000365153 76 ntBASIC4.67□□□□□ -1.66
CCDC113Q9H0I3 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC113Q9H0I3 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC113Q9H0I3 AL139039.1-201ENST00000401900 692 ntBASIC4.67□□□□□ -1.66
CCDC113Q9H0I3 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC113Q9H0I3 AC080125.1-201ENST00000414888 684 ntBASIC4.67□□□□□ -1.66
CCDC113Q9H0I3 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC113Q9H0I3 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.67□□□□□ -1.66
CCDC113Q9H0I3 BX842559.1-201ENST00000419615 532 ntBASIC4.67□□□□□ -1.66
CCDC113Q9H0I3 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC113Q9H0I3 MTND4P28-201ENST00000426217 387 ntBASIC4.67□□□□□ -1.66
CCDC113Q9H0I3 AC004975.1-201ENST00000428733 208 ntBASIC4.67□□□□□ -1.66
CCDC113Q9H0I3 VDAC1P3-201ENST00000434069 851 ntBASIC4.67□□□□□ -1.66
CCDC113Q9H0I3 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC113Q9H0I3 AC069285.2-201ENST00000440210 275 ntBASIC4.67□□□□□ -1.66
CCDC113Q9H0I3 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC113Q9H0I3 RNU6-927P-201ENST00000516199 100 ntBASIC4.67□□□□□ -1.66
CCDC113Q9H0I3 RNU7-30P-201ENST00000516835 62 ntBASIC4.67□□□□□ -1.66
CCDC113Q9H0I3 RNU6-143P-201ENST00000516942 93 ntBASIC4.67□□□□□ -1.66
CCDC113Q9H0I3 RN7SKP256-201ENST00000517201 314 ntBASIC4.67□□□□□ -1.66
CCDC113Q9H0I3 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.67□□□□□ -1.66
CCDC113Q9H0I3 RPL7P20-201ENST00000520308 745 ntBASIC4.67□□□□□ -1.66
CCDC113Q9H0I3 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC113Q9H0I3 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC113Q9H0I3 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.67□□□□□ -1.66
CCDC113Q9H0I3 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC113Q9H0I3 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC113Q9H0I3 C8orf59P2-201ENST00000603441 271 ntBASIC4.67□□□□□ -1.66
CCDC113Q9H0I3 AC034102.8-201ENST00000615146 484 ntBASIC4.67□□□□□ -1.66
CCDC113Q9H0I3 AL731566.2-201ENST00000618971 317 ntBASIC4.67□□□□□ -1.66
CCDC113Q9H0I3 AC019278.1-201ENST00000623516 479 ntBASIC4.67□□□□□ -1.66
CCDC113Q9H0I3 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC113Q9H0I3 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC113Q9H0I3 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
CCDC113Q9H0I3 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
CCDC113Q9H0I3 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC113Q9H0I3 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC113Q9H0I3 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC113Q9H0I3 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
CCDC113Q9H0I3 Y_RNA.166-201ENST00000363730 102 ntBASIC4.66□□□□□ -1.66
CCDC113Q9H0I3 SNORA70C-201ENST00000384538 135 ntBASIC4.66□□□□□ -1.66
CCDC113Q9H0I3 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC4.66□□□□□ -1.66
CCDC113Q9H0I3 RPL27AP8-201ENST00000424277 446 ntBASIC4.66□□□□□ -1.66
CCDC113Q9H0I3 MTCO3P46-201ENST00000425787 232 ntBASIC4.66□□□□□ -1.66
CCDC113Q9H0I3 UBE2V1P7-201ENST00000446395 340 ntBASIC4.66□□□□□ -1.66
CCDC113Q9H0I3 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC113Q9H0I3 RPL31P13-201ENST00000484151 370 ntBASIC4.66□□□□□ -1.66
CCDC113Q9H0I3 RPS15AP34-201ENST00000487776 387 ntBASIC4.66□□□□□ -1.66
CCDC113Q9H0I3 TTC39CP1-201ENST00000512513 755 ntBASIC4.66□□□□□ -1.66
CCDC113Q9H0I3 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms