Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AL096840.1-201ENST00000603287 93 ntBASIC2.09□□□□□ -2.07
TRIM4Q9C037 AL022099.1-201ENST00000604551 712 ntBASIC2.09□□□□□ -2.07
TRIM4Q9C037 MIR6845-201ENST00000613182 61 ntBASIC2.09□□□□□ -2.07
TRIM4Q9C037 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.09□□□□□ -2.07
TRIM4Q9C037 AC009831.4-201ENST00000620744 325 ntBASIC2.09□□□□□ -2.07
TRIM4Q9C037 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.09□□□□□ -2.08
TRIM4Q9C037 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.09□□□□□ -2.08
TRIM4Q9C037 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
TRIM4Q9C037 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
TRIM4Q9C037 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.08□□□□□ -2.08
TRIM4Q9C037 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
TRIM4Q9C037 AL137003.2-201ENST00000606924 2538 ntBASIC2.08□□□□□ -2.08
TRIM4Q9C037 Y_RNA.116-201ENST00000363292 103 ntBASIC2.08□□□□□ -2.08
TRIM4Q9C037 RNU1-105P-201ENST00000363470 161 ntBASIC2.08□□□□□ -2.08
TRIM4Q9C037 SNORA38-201ENST00000363946 132 ntBASIC2.08□□□□□ -2.08
TRIM4Q9C037 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.08□□□□□ -2.08
TRIM4Q9C037 MIR221-201ENST00000385135 110 ntBASIC2.08□□□□□ -2.08
TRIM4Q9C037 U3.20-201ENST00000390909 217 ntBASIC2.08□□□□□ -2.08
TRIM4Q9C037 SNORA26.9-201ENST00000391322 122 ntBASIC2.08□□□□□ -2.08
TRIM4Q9C037 SNORA11.4-201ENST00000408823 129 ntBASIC2.08□□□□□ -2.08
TRIM4Q9C037 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.08□□□□□ -2.08
TRIM4Q9C037 PTP4A1P7-201ENST00000423476 514 ntBASIC2.08□□□□□ -2.08
TRIM4Q9C037 UBE2V1P13-201ENST00000436983 439 ntBASIC2.08□□□□□ -2.08
TRIM4Q9C037 OR9N1P-202ENST00000494289 481 ntBASIC2.08□□□□□ -2.08
TRIM4Q9C037 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.08□□□□□ -2.08
TRIM4Q9C037 NDUFB4P2-201ENST00000509515 391 ntBASIC2.08□□□□□ -2.08
TRIM4Q9C037 RNU6-27P-201ENST00000516146 107 ntBASIC2.08□□□□□ -2.08
TRIM4Q9C037 LSM6P2-201ENST00000552208 177 ntBASIC2.08□□□□□ -2.08
TRIM4Q9C037 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.08□□□□□ -2.08
TRIM4Q9C037 AP000254.1-201ENST00000609934 520 ntBASIC2.08□□□□□ -2.08
TRIM4Q9C037 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.08□□□□□ -2.08
TRIM4Q9C037 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
TRIM4Q9C037 AC005332.10-201ENST00000612725 619 ntBASIC2.08□□□□□ -2.08
TRIM4Q9C037 FRG1HP-204ENST00000617940 757 ntBASIC2.08□□□□□ -2.08
TRIM4Q9C037 AC009318.4-201ENST00000620496 486 ntBASIC2.08□□□□□ -2.08
TRIM4Q9C037 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
TRIM4Q9C037 CR848007.1-201ENST00000442354 1699 ntBASIC2.08□□□□□ -2.08
TRIM4Q9C037 SDAD1P2-201ENST00000441308 2028 ntBASIC2.08□□□□□ -2.08
TRIM4Q9C037 AC025263.3-201ENST00000622965 1396 ntBASIC2.08□□□□□ -2.08
TRIM4Q9C037 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.07□□□□□ -2.08
TRIM4Q9C037 MIR378A-201ENST00000362177 66 ntBASIC2.07□□□□□ -2.08
TRIM4Q9C037 RNU6-252P-201ENST00000363232 107 ntBASIC2.07□□□□□ -2.08
TRIM4Q9C037 RNA5SP160-201ENST00000364866 120 ntBASIC2.07□□□□□ -2.08
TRIM4Q9C037 MIR518E-201ENST00000385252 88 ntBASIC2.07□□□□□ -2.08
TRIM4Q9C037 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.07□□□□□ -2.08
TRIM4Q9C037 AL023807.1-201ENST00000407932 359 ntBASIC2.07□□□□□ -2.08
TRIM4Q9C037 RPL17P12-201ENST00000413391 526 ntBASIC2.07□□□□□ -2.08
TRIM4Q9C037 LUZP4P1-201ENST00000415420 344 ntBASIC2.07□□□□□ -2.08
TRIM4Q9C037 RPL27AP8-201ENST00000424277 446 ntBASIC2.07□□□□□ -2.08
TRIM4Q9C037 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
TRIM4Q9C037 XKRY2-201ENST00000442362 1093 ntBASIC2.07□□□□□ -2.08
TRIM4Q9C037 AC007677.1-201ENST00000445757 515 ntBASIC2.07□□□□□ -2.08
TRIM4Q9C037 AL118520.1-201ENST00000450770 291 ntBASIC2.07□□□□□ -2.08
TRIM4Q9C037 snoU109.4-201ENST00000458953 143 ntBASIC2.07□□□□□ -2.08
TRIM4Q9C037 RPL31P60-201ENST00000478450 367 ntBASIC2.07□□□□□ -2.08
TRIM4Q9C037 RPL23AP41-201ENST00000484754 458 ntBASIC2.07□□□□□ -2.08
TRIM4Q9C037 SSR3-208ENST00000496050 579 ntTSL 4 BASIC2.07□□□□□ -2.08
TRIM4Q9C037 AC022634.1-201ENST00000520765 532 ntBASIC2.07□□□□□ -2.08
TRIM4Q9C037 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.07□□□□□ -2.08
TRIM4Q9C037 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.07□□□□□ -2.08
TRIM4Q9C037 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.07□□□□□ -2.08
TRIM4Q9C037 AC090897.2-201ENST00000581715 130 ntBASIC2.07□□□□□ -2.08
TRIM4Q9C037 SNORD14A-201ENST00000606526 91 ntBASIC2.07□□□□□ -2.08
TRIM4Q9C037 SDR42E1P2-201ENST00000614861 481 ntBASIC2.07□□□□□ -2.08
TRIM4Q9C037 SDR42E1P4-201ENST00000620894 481 ntBASIC2.07□□□□□ -2.08
TRIM4Q9C037 DUXAP9-208ENST00000622815 614 ntBASIC2.07□□□□□ -2.08
TRIM4Q9C037 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.07□□□□□ -2.08
TRIM4Q9C037 NUP58P1-201ENST00000502546 1738 ntBASIC2.07□□□□□ -2.08
TRIM4Q9C037 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.07□□□□□ -2.08
TRIM4Q9C037 AC009487.4-201ENST00000624969 3585 ntBASIC2.06□□□□□ -2.08
TRIM4Q9C037 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
TRIM4Q9C037 RNA5SP27-201ENST00000363839 119 ntBASIC2.06□□□□□ -2.08
TRIM4Q9C037 RNU6-270P-201ENST00000364131 105 ntBASIC2.06□□□□□ -2.08
TRIM4Q9C037 Y_RNA.224-201ENST00000364308 111 ntBASIC2.06□□□□□ -2.08
TRIM4Q9C037 SNORA17.3-201ENST00000391159 129 ntBASIC2.06□□□□□ -2.08
TRIM4Q9C037 AC007560.1-201ENST00000426912 237 ntBASIC2.06□□□□□ -2.08
TRIM4Q9C037 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC2.06□□□□□ -2.08
TRIM4Q9C037 AL451074.3-201ENST00000437709 472 ntBASIC2.06□□□□□ -2.08
TRIM4Q9C037 SDR42E1P3-201ENST00000438345 502 ntBASIC2.06□□□□□ -2.08
TRIM4Q9C037 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.06□□□□□ -2.08
TRIM4Q9C037 snoU13.18-201ENST00000459483 104 ntBASIC2.06□□□□□ -2.08
TRIM4Q9C037 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.06□□□□□ -2.08
TRIM4Q9C037 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.06□□□□□ -2.08
TRIM4Q9C037 AC106872.3-201ENST00000495104 446 ntBASIC2.06□□□□□ -2.08
TRIM4Q9C037 AC104108.1-201ENST00000509930 412 ntBASIC2.06□□□□□ -2.08
TRIM4Q9C037 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.06□□□□□ -2.08
TRIM4Q9C037 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.06□□□□□ -2.08
TRIM4Q9C037 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC2.06□□□□□ -2.08
TRIM4Q9C037 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.06□□□□□ -2.08
TRIM4Q9C037 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC2.06□□□□□ -2.08
TRIM4Q9C037 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC2.06□□□□□ -2.08
TRIM4Q9C037 AC010738.1-201ENST00000604970 987 ntBASIC2.06□□□□□ -2.08
TRIM4Q9C037 AC090617.9-201ENST00000623751 147 ntBASIC2.06□□□□□ -2.08
TRIM4Q9C037 AC091925.2-201ENST00000625059 256 ntBASIC2.06□□□□□ -2.08
TRIM4Q9C037 ZNF663P-202ENST00000641770 1131 ntBASIC2.06□□□□□ -2.08
TRIM4Q9C037 MTCO1P18-201ENST00000455518 1419 ntBASIC2.06□□□□□ -2.08
TRIM4Q9C037 AC008568.2-201ENST00000623862 2313 ntBASIC2.06□□□□□ -2.08
TRIM4Q9C037 TPTE2P4-201ENST00000258589 1605 ntBASIC2.06□□□□□ -2.08
TRIM4Q9C037 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
TRIM4Q9C037 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms