Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 AC004486.1-201ENST00000546846 233 ntBASIC2.64□□□□□ -1.99
NPAS2Q99743 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.64□□□□□ -1.99
NPAS2Q99743 AC010546.1-201ENST00000569391 485 ntBASIC2.64□□□□□ -1.99
NPAS2Q99743 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.64□□□□□ -1.99
NPAS2Q99743 ELOCP29-201ENST00000588193 334 ntBASIC2.64□□□□□ -1.99
NPAS2Q99743 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.64□□□□□ -1.99
NPAS2Q99743 BNIP3P40-201ENST00000596017 556 ntBASIC2.64□□□□□ -1.99
NPAS2Q99743 AC245884.10-201ENST00000597355 337 ntBASIC2.64□□□□□ -1.99
NPAS2Q99743 ATP1B3P1-201ENST00000605365 821 ntBASIC2.64□□□□□ -1.99
NPAS2Q99743 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
NPAS2Q99743 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.64□□□□□ -1.99
NPAS2Q99743 AC022960.3-201ENST00000619794 441 ntBASIC2.64□□□□□ -1.99
NPAS2Q99743 UCA1.1-201ENST00000620952 75 ntBASIC2.64□□□□□ -1.99
NPAS2Q99743 AC007998.5-201ENST00000622938 237 ntBASIC2.64□□□□□ -1.99
NPAS2Q99743 AL138713.1-201ENST00000624026 2130 ntBASIC2.64□□□□□ -1.99
NPAS2Q99743 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC2.64□□□□□ -1.99
NPAS2Q99743 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.64□□□□□ -1.99
NPAS2Q99743 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
NPAS2Q99743 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
NPAS2Q99743 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
NPAS2Q99743 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
NPAS2Q99743 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.64□□□□□ -1.99
NPAS2Q99743 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
NPAS2Q99743 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
NPAS2Q99743 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.63□□□□□ -1.99
NPAS2Q99743 RNU6-1180P-201ENST00000364935 107 ntBASIC2.63□□□□□ -1.99
NPAS2Q99743 RNU6-114P-201ENST00000384704 105 ntBASIC2.63□□□□□ -1.99
NPAS2Q99743 MIR627-201ENST00000384979 97 ntBASIC2.63□□□□□ -1.99
NPAS2Q99743 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
NPAS2Q99743 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
NPAS2Q99743 UBE2V1P2-201ENST00000397758 440 ntBASIC2.63□□□□□ -1.99
NPAS2Q99743 AL590084.2-201ENST00000401481 382 ntBASIC2.63□□□□□ -1.99
NPAS2Q99743 RNU2-33P-201ENST00000410344 192 ntBASIC2.63□□□□□ -1.99
NPAS2Q99743 RNU4-22P-201ENST00000411058 166 ntBASIC2.63□□□□□ -1.99
NPAS2Q99743 RNU6-516P-201ENST00000411381 104 ntBASIC2.63□□□□□ -1.99
NPAS2Q99743 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.63□□□□□ -1.99
NPAS2Q99743 MTCYBP38-201ENST00000417160 1123 ntBASIC2.63□□□□□ -1.99
NPAS2Q99743 AC098614.2-201ENST00000426040 255 ntBASIC2.63□□□□□ -1.99
NPAS2Q99743 AL358075.3-201ENST00000426289 226 ntBASIC2.63□□□□□ -1.99
NPAS2Q99743 ZYG11AP1-201ENST00000430329 837 ntBASIC2.63□□□□□ -1.99
NPAS2Q99743 RPL35AP22-201ENST00000436855 335 ntBASIC2.63□□□□□ -1.99
NPAS2Q99743 FGF7P5-201ENST00000441829 291 ntBASIC2.63□□□□□ -1.99
NPAS2Q99743 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.63□□□□□ -1.99
NPAS2Q99743 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.63□□□□□ -1.99
NPAS2Q99743 RPL31P41-201ENST00000477967 372 ntBASIC2.63□□□□□ -1.99
NPAS2Q99743 AP001025.2-201ENST00000490908 477 ntBASIC2.63□□□□□ -1.99
NPAS2Q99743 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.63□□□□□ -1.99
NPAS2Q99743 AC138853.1-201ENST00000503549 823 ntBASIC2.63□□□□□ -1.99
NPAS2Q99743 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.63□□□□□ -1.99
NPAS2Q99743 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.63□□□□□ -1.99
NPAS2Q99743 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC2.63□□□□□ -1.99
NPAS2Q99743 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.63□□□□□ -1.99
NPAS2Q99743 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.63□□□□□ -1.99
NPAS2Q99743 RNU6-415P-201ENST00000516252 97 ntBASIC2.63□□□□□ -1.99
NPAS2Q99743 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
NPAS2Q99743 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
NPAS2Q99743 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
NPAS2Q99743 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
NPAS2Q99743 AC009712.1-201ENST00000564938 316 ntBASIC2.63□□□□□ -1.99
NPAS2Q99743 AC005951.2-201ENST00000576282 495 ntBASIC2.63□□□□□ -1.99
NPAS2Q99743 AL356575.1-201ENST00000603008 283 ntBASIC2.63□□□□□ -1.99
NPAS2Q99743 DUXAP3-201ENST00000603616 594 ntBASIC2.63□□□□□ -1.99
NPAS2Q99743 MTND3P19-201ENST00000603825 345 ntBASIC2.63□□□□□ -1.99
NPAS2Q99743 AC006023.1-201ENST00000603944 259 ntBASIC2.63□□□□□ -1.99
NPAS2Q99743 RNU4-5P-201ENST00000607255 135 ntBASIC2.63□□□□□ -1.99
NPAS2Q99743 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.63□□□□□ -1.99
NPAS2Q99743 AC245297.2-201ENST00000610119 565 ntBASIC2.63□□□□□ -1.99
NPAS2Q99743 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.63□□□□□ -1.99
NPAS2Q99743 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.63□□□□□ -1.99
NPAS2Q99743 OR4G3P-201ENST00000633500 913 ntBASIC2.63□□□□□ -1.99
NPAS2Q99743 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
NPAS2Q99743 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
NPAS2Q99743 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
NPAS2Q99743 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.62□□□□□ -1.99
NPAS2Q99743 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.62□□□□□ -1.99
NPAS2Q99743 RNU6-223P-201ENST00000362830 107 ntBASIC2.62□□□□□ -1.99
NPAS2Q99743 AL109755.1-201ENST00000401791 649 ntBASIC2.62□□□□□ -1.99
NPAS2Q99743 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
NPAS2Q99743 MTCO2P8-201ENST00000412213 658 ntBASIC2.62□□□□□ -1.99
NPAS2Q99743 RPS3AP37-201ENST00000419176 745 ntBASIC2.62□□□□□ -1.99
NPAS2Q99743 MTND2P9-201ENST00000422293 931 ntBASIC2.62□□□□□ -1.99
NPAS2Q99743 ZNF863P-201ENST00000426746 417 ntBASIC2.62□□□□□ -1.99
NPAS2Q99743 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.62□□□□□ -1.99
NPAS2Q99743 AC087499.2-201ENST00000432861 149 ntBASIC2.62□□□□□ -1.99
NPAS2Q99743 EEF1A1P39-201ENST00000440791 250 ntBASIC2.62□□□□□ -1.99
NPAS2Q99743 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.62□□□□□ -1.99
NPAS2Q99743 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.62□□□□□ -1.99
NPAS2Q99743 AL031313.1-201ENST00000448435 256 ntBASIC2.62□□□□□ -1.99
NPAS2Q99743 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
NPAS2Q99743 AL590639.1-201ENST00000456484 337 ntBASIC2.62□□□□□ -1.99
NPAS2Q99743 MEMO1P3-201ENST00000459811 302 ntBASIC2.62□□□□□ -1.99
NPAS2Q99743 AC090525.1-201ENST00000479116 478 ntBASIC2.62□□□□□ -1.99
NPAS2Q99743 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.62□□□□□ -1.99
NPAS2Q99743 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.62□□□□□ -1.99
NPAS2Q99743 TPT1P8-201ENST00000510120 555 ntBASIC2.62□□□□□ -1.99
NPAS2Q99743 AC113155.1-201ENST00000511141 769 ntBASIC2.62□□□□□ -1.99
NPAS2Q99743 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.62□□□□□ -1.99
NPAS2Q99743 SCARNA1-201ENST00000517138 166 ntBASIC2.62□□□□□ -1.99
NPAS2Q99743 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.62□□□□□ -1.99
NPAS2Q99743 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms