Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 AL356057.2-201ENST00000403318 432 ntBASIC2.73□□□□□ -1.97
LITAFQ99732 RAB28P1-201ENST00000411517 641 ntBASIC2.73□□□□□ -1.97
LITAFQ99732 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.73□□□□□ -1.97
LITAFQ99732 AC002075.2-201ENST00000425207 252 ntBASIC2.73□□□□□ -1.97
LITAFQ99732 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC2.73□□□□□ -1.97
LITAFQ99732 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC2.73□□□□□ -1.97
LITAFQ99732 HMGN2P21-201ENST00000447764 270 ntBASIC2.73□□□□□ -1.97
LITAFQ99732 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC2.73□□□□□ -1.97
LITAFQ99732 AL162388.1-201ENST00000450912 352 ntBASIC2.73□□□□□ -1.97
LITAFQ99732 RPS24P6-201ENST00000452670 400 ntBASIC2.73□□□□□ -1.97
LITAFQ99732 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC2.73□□□□□ -1.97
LITAFQ99732 snoU13.24-201ENST00000458998 104 ntBASIC2.73□□□□□ -1.97
LITAFQ99732 RNU6-953P-201ENST00000459154 107 ntBASIC2.73□□□□□ -1.97
LITAFQ99732 RPL35AP28-201ENST00000459730 331 ntBASIC2.73□□□□□ -1.97
LITAFQ99732 TRBV1-201ENST00000476502 284 ntBASIC2.73□□□□□ -1.97
LITAFQ99732 AC108860.1-201ENST00000484521 383 ntBASIC2.73□□□□□ -1.97
LITAFQ99732 RPS23P1-201ENST00000491662 432 ntBASIC2.73□□□□□ -1.97
LITAFQ99732 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC2.73□□□□□ -1.97
LITAFQ99732 SSX6-203ENST00000509958 336 ntTSL 3 BASIC2.73□□□□□ -1.97
LITAFQ99732 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.73□□□□□ -1.97
LITAFQ99732 RNU6-189P-201ENST00000516120 101 ntBASIC2.73□□□□□ -1.97
LITAFQ99732 RN7SKP66-201ENST00000516681 231 ntBASIC2.73□□□□□ -1.97
LITAFQ99732 RNU7-143P-201ENST00000516781 65 ntBASIC2.73□□□□□ -1.97
LITAFQ99732 IGKV2D-23-201ENST00000518179 286 ntBASIC2.73□□□□□ -1.97
LITAFQ99732 AC090136.1-201ENST00000520009 240 ntBASIC2.73□□□□□ -1.97
LITAFQ99732 IGKV2-18-201ENST00000522607 343 ntBASIC2.73□□□□□ -1.97
LITAFQ99732 AP000763.2-201ENST00000540641 163 ntBASIC2.73□□□□□ -1.97
LITAFQ99732 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.73□□□□□ -1.97
LITAFQ99732 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
LITAFQ99732 AL355836.1-201ENST00000555951 870 ntBASIC2.73□□□□□ -1.97
LITAFQ99732 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.73□□□□□ -1.97
LITAFQ99732 AC106782.4-201ENST00000568264 210 ntBASIC2.73□□□□□ -1.97
LITAFQ99732 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC2.73□□□□□ -1.97
LITAFQ99732 AC012182.1-201ENST00000570133 895 ntBASIC2.73□□□□□ -1.97
LITAFQ99732 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.73□□□□□ -1.97
LITAFQ99732 MIR3942-201ENST00000585264 109 ntBASIC2.73□□□□□ -1.97
LITAFQ99732 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC2.73□□□□□ -1.97
LITAFQ99732 AC010928.3-201ENST00000587712 541 ntBASIC2.73□□□□□ -1.97
LITAFQ99732 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
LITAFQ99732 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC2.73□□□□□ -1.97
LITAFQ99732 AL031320.1-201ENST00000604177 357 ntBASIC2.73□□□□□ -1.97
LITAFQ99732 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.73□□□□□ -1.97
LITAFQ99732 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC2.73□□□□□ -1.97
LITAFQ99732 uc_338.15-201ENST00000615470 191 ntBASIC2.73□□□□□ -1.97
LITAFQ99732 AC103705.1-201ENST00000619013 241 ntBASIC2.73□□□□□ -1.97
LITAFQ99732 AL160413.1-201ENST00000622780 310 ntBASIC2.73□□□□□ -1.97
LITAFQ99732 AC140479.6-201ENST00000633535 357 ntBASIC2.73□□□□□ -1.97
LITAFQ99732 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
LITAFQ99732 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
LITAFQ99732 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
LITAFQ99732 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
LITAFQ99732 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
LITAFQ99732 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC2.73□□□□□ -1.97
LITAFQ99732 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC2.73□□□□□ -1.97
LITAFQ99732 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
LITAFQ99732 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
LITAFQ99732 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
LITAFQ99732 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
LITAFQ99732 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
LITAFQ99732 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC2.72□□□□□ -1.97
LITAFQ99732 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
LITAFQ99732 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC2.72□□□□□ -1.97
LITAFQ99732 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
LITAFQ99732 HSPA8P4-201ENST00000511877 1920 ntBASIC2.72□□□□□ -1.97
LITAFQ99732 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
LITAFQ99732 RNU5A-1-201ENST00000362698 116 ntBASIC2.72□□□□□ -1.97
LITAFQ99732 RNU6-1252P-201ENST00000363054 104 ntBASIC2.72□□□□□ -1.97
LITAFQ99732 SNORD113-7-201ENST00000363762 77 ntBASIC2.72□□□□□ -1.97
LITAFQ99732 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
LITAFQ99732 Y_RNA.384-201ENST00000383909 102 ntBASIC2.72□□□□□ -1.97
LITAFQ99732 RNU6-393P-201ENST00000384475 107 ntBASIC2.72□□□□□ -1.97
LITAFQ99732 MIR223-201ENST00000385204 110 ntBASIC2.72□□□□□ -1.97
LITAFQ99732 RNA5SP219-201ENST00000390940 113 ntBASIC2.72□□□□□ -1.97
LITAFQ99732 SNORA16.2-201ENST00000390991 127 ntBASIC2.72□□□□□ -1.97
LITAFQ99732 EIF4E2P1-201ENST00000393781 255 ntBASIC2.72□□□□□ -1.97
LITAFQ99732 AL139039.1-201ENST00000401900 692 ntBASIC2.72□□□□□ -1.97
LITAFQ99732 BX682237.1-201ENST00000415016 335 ntBASIC2.72□□□□□ -1.97
LITAFQ99732 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.72□□□□□ -1.97
LITAFQ99732 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.72□□□□□ -1.97
LITAFQ99732 AL591212.2-201ENST00000433923 257 ntBASIC2.72□□□□□ -1.97
LITAFQ99732 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC2.72□□□□□ -1.97
LITAFQ99732 NDUFA5P4-201ENST00000436704 385 ntBASIC2.72□□□□□ -1.97
LITAFQ99732 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.72□□□□□ -1.97
LITAFQ99732 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.72□□□□□ -1.97
LITAFQ99732 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC2.72□□□□□ -1.97
LITAFQ99732 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC2.72□□□□□ -1.97
LITAFQ99732 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC2.72□□□□□ -1.97
LITAFQ99732 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
LITAFQ99732 ARL2BPP10-201ENST00000446487 531 ntBASIC2.72□□□□□ -1.97
LITAFQ99732 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.72□□□□□ -1.97
LITAFQ99732 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.72□□□□□ -1.97
LITAFQ99732 Y_RNA.632-201ENST00000459189 102 ntBASIC2.72□□□□□ -1.97
LITAFQ99732 MTND4P17-201ENST00000470444 350 ntBASIC2.72□□□□□ -1.97
LITAFQ99732 RPL7P43-201ENST00000478876 753 ntBASIC2.72□□□□□ -1.97
LITAFQ99732 MTCO1P29-201ENST00000496868 288 ntBASIC2.72□□□□□ -1.97
LITAFQ99732 HIGD1AP13-201ENST00000509878 289 ntBASIC2.72□□□□□ -1.97
LITAFQ99732 RNU6-1088P-201ENST00000516850 104 ntBASIC2.72□□□□□ -1.97
LITAFQ99732 IGKV1-32-201ENST00000519290 311 ntBASIC2.72□□□□□ -1.97
LITAFQ99732 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC2.72□□□□□ -1.97
LITAFQ99732 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms