Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 ZNF965P-201ENST00000432501 817 ntBASIC0.96□□□□□ -2.26
COL12A1Q99715 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC0.96□□□□□ -2.26
COL12A1Q99715 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC0.96□□□□□ -2.26
COL12A1Q99715 LRRC34P2-201ENST00000514850 553 ntBASIC0.96□□□□□ -2.26
COL12A1Q99715 RNA5SP364-201ENST00000516938 78 ntBASIC0.96□□□□□ -2.26
COL12A1Q99715 SETP2-201ENST00000553886 926 ntBASIC0.96□□□□□ -2.26
COL12A1Q99715 MIR4295-201ENST00000585286 85 ntBASIC0.96□□□□□ -2.26
COL12A1Q99715 AL512605.2-201ENST00000592972 256 ntBASIC0.96□□□□□ -2.26
COL12A1Q99715 MFSD8-213ENST00000641134 1327 ntBASIC0.96□□□□□ -2.26
COL12A1Q99715 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
COL12A1Q99715 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC0.96□□□□□ -2.26
COL12A1Q99715 RNU1-52P-201ENST00000384190 164 ntBASIC0.96□□□□□ -2.26
COL12A1Q99715 TRAPPC2P5-201ENST00000426293 308 ntBASIC0.96□□□□□ -2.26
COL12A1Q99715 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC0.96□□□□□ -2.26
COL12A1Q99715 AC093801.2-201ENST00000503966 1050 ntBASIC0.96□□□□□ -2.26
COL12A1Q99715 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC0.96□□□□□ -2.26
COL12A1Q99715 OR4V1P-201ENST00000525394 1140 ntBASIC0.96□□□□□ -2.26
COL12A1Q99715 AC211469.2-201ENST00000605461 205 ntBASIC0.96□□□□□ -2.26
COL12A1Q99715 MIR4278-201ENST00000636094 69 ntBASIC0.96□□□□□ -2.26
COL12A1Q99715 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC0.96□□□□□ -2.26
COL12A1Q99715 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
COL12A1Q99715 RNA5SP465-201ENST00000391195 109 ntBASIC0.95□□□□□ -2.26
COL12A1Q99715 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC0.95□□□□□ -2.26
COL12A1Q99715 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
COL12A1Q99715 CBX3P7-201ENST00000532876 502 ntBASIC0.95□□□□□ -2.26
COL12A1Q99715 HSPE1P14-201ENST00000605812 302 ntBASIC0.95□□□□□ -2.26
COL12A1Q99715 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC0.95□□□□□ -2.26
COL12A1Q99715 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
COL12A1Q99715 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
COL12A1Q99715 Y_RNA.280-201ENST00000364765 112 ntBASIC0.95□□□□□ -2.26
COL12A1Q99715 RNA5SP167-201ENST00000365461 116 ntBASIC0.95□□□□□ -2.26
COL12A1Q99715 TXNP7-201ENST00000406296 293 ntBASIC0.95□□□□□ -2.26
COL12A1Q99715 AC074117.2-201ENST00000417130 397 ntBASIC0.95□□□□□ -2.26
COL12A1Q99715 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC0.95□□□□□ -2.26
COL12A1Q99715 AC104806.1-201ENST00000508720 308 ntBASIC0.95□□□□□ -2.26
COL12A1Q99715 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC0.95□□□□□ -2.26
COL12A1Q99715 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC0.95□□□□□ -2.26
COL12A1Q99715 AC091925.1-201ENST00000623204 462 ntBASIC0.95□□□□□ -2.26
COL12A1Q99715 ICE2P2-201ENST00000483823 2787 ntBASIC0.95□□□□□ -2.26
COL12A1Q99715 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC0.95□□□□□ -2.26
COL12A1Q99715 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.95□□□□□ -2.26
COL12A1Q99715 HSPE1P26-201ENST00000405341 275 ntBASIC0.95□□□□□ -2.26
COL12A1Q99715 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.95□□□□□ -2.26
COL12A1Q99715 BOLA3P3-201ENST00000505182 232 ntBASIC0.95□□□□□ -2.26
COL12A1Q99715 SNX5P1-201ENST00000505757 1041 ntBASIC0.95□□□□□ -2.26
COL12A1Q99715 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC0.95□□□□□ -2.26
COL12A1Q99715 DEFB108E-201ENST00000524692 240 ntBASIC0.95□□□□□ -2.26
COL12A1Q99715 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC0.95□□□□□ -2.26
COL12A1Q99715 ANP32BP3-201ENST00000559213 706 ntBASIC0.95□□□□□ -2.26
COL12A1Q99715 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
COL12A1Q99715 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
COL12A1Q99715 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
COL12A1Q99715 RNU1-109P-201ENST00000383960 147 ntBASIC0.94□□□□□ -2.26
COL12A1Q99715 RNU11-5P-201ENST00000391216 129 ntBASIC0.94□□□□□ -2.26
COL12A1Q99715 RPL5P19-201ENST00000404228 893 ntBASIC0.94□□□□□ -2.26
COL12A1Q99715 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.94□□□□□ -2.26
COL12A1Q99715 AC233728.2-201ENST00000425348 757 ntBASIC0.94□□□□□ -2.26
COL12A1Q99715 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC0.94□□□□□ -2.26
COL12A1Q99715 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC0.94□□□□□ -2.26
COL12A1Q99715 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.94□□□□□ -2.26
COL12A1Q99715 AC108706.1-201ENST00000611053 297 ntBASIC0.94□□□□□ -2.26
COL12A1Q99715 AC092140.2-201ENST00000618027 521 ntBASIC0.94□□□□□ -2.26
COL12A1Q99715 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC0.94□□□□□ -2.26
COL12A1Q99715 OR5AQ1P-202ENST00000641257 1534 ntBASIC0.94□□□□□ -2.26
COL12A1Q99715 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC0.94□□□□□ -2.26
COL12A1Q99715 AC008669.1-201ENST00000565823 2178 ntBASIC0.94□□□□□ -2.26
COL12A1Q99715 ZNF37BP-203ENST00000452306 1352 ntBASIC0.94□□□□□ -2.26
COL12A1Q99715 Y_RNA.324-201ENST00000365165 102 ntBASIC0.94□□□□□ -2.26
COL12A1Q99715 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC0.94□□□□□ -2.26
COL12A1Q99715 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC0.94□□□□□ -2.26
COL12A1Q99715 AL360221.1-201ENST00000445989 335 ntBASIC0.94□□□□□ -2.26
COL12A1Q99715 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC0.94□□□□□ -2.26
COL12A1Q99715 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC0.94□□□□□ -2.26
COL12A1Q99715 AP004607.1-201ENST00000524456 203 ntBASIC0.94□□□□□ -2.26
COL12A1Q99715 AC018754.1-201ENST00000607486 925 ntBASIC0.94□□□□□ -2.26
COL12A1Q99715 AC000123.2-201ENST00000623124 461 ntBASIC0.94□□□□□ -2.26
COL12A1Q99715 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
COL12A1Q99715 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC0.94□□□□□ -2.26
COL12A1Q99715 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC0.93□□□□□ -2.26
COL12A1Q99715 AC004943.3-201ENST00000624116 600 ntBASIC0.93□□□□□ -2.26
COL12A1Q99715 AC011155.1-201ENST00000316512 456 ntBASIC0.93□□□□□ -2.26
COL12A1Q99715 Y_RNA.412-201ENST00000384001 104 ntBASIC0.93□□□□□ -2.26
COL12A1Q99715 FCF1P2-201ENST00000415284 583 ntBASIC0.93□□□□□ -2.26
COL12A1Q99715 RPL21P39-201ENST00000463605 483 ntBASIC0.93□□□□□ -2.26
COL12A1Q99715 CYCSP23-201ENST00000519781 313 ntBASIC0.93□□□□□ -2.26
COL12A1Q99715 APOOP3-201ENST00000536787 586 ntBASIC0.93□□□□□ -2.26
COL12A1Q99715 MIR4711-201ENST00000578274 70 ntBASIC0.93□□□□□ -2.26
COL12A1Q99715 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
COL12A1Q99715 RPL27AP8-201ENST00000424277 446 ntBASIC0.92□□□□□ -2.26
COL12A1Q99715 AC243772.1-201ENST00000451620 410 ntBASIC0.92□□□□□ -2.26
COL12A1Q99715 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC0.92□□□□□ -2.26
COL12A1Q99715 RPL21P93-201ENST00000480465 489 ntBASIC0.92□□□□□ -2.26
COL12A1Q99715 AC233702.1-201ENST00000482905 502 ntBASIC0.92□□□□□ -2.26
COL12A1Q99715 AC093591.1-201ENST00000491435 481 ntBASIC0.92□□□□□ -2.26
COL12A1Q99715 AC113155.1-201ENST00000511141 769 ntBASIC0.92□□□□□ -2.26
COL12A1Q99715 AC011330.2-201ENST00000621680 635 ntBASIC0.92□□□□□ -2.26
COL12A1Q99715 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC0.92□□□□□ -2.26
COL12A1Q99715 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.92□□□□□ -2.26
COL12A1Q99715 MTND4P12-201ENST00000498999 1377 ntBASIC0.92□□□□□ -2.26
COL12A1Q99715 RNU6-203P-201ENST00000384038 104 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms