Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 RNU6-193P-201ENST00000410977 107 ntBASIC2.13□□□□□ -2.07
LINC00477Q96M19 RPL7P8-201ENST00000411964 730 ntBASIC2.13□□□□□ -2.07
LINC00477Q96M19 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.13□□□□□ -2.07
LINC00477Q96M19 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.13□□□□□ -2.07
LINC00477Q96M19 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.13□□□□□ -2.07
LINC00477Q96M19 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.13□□□□□ -2.07
LINC00477Q96M19 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.13□□□□□ -2.07
LINC00477Q96M19 NDUFB4P6-201ENST00000436819 366 ntBASIC2.13□□□□□ -2.07
LINC00477Q96M19 THAP5P1-201ENST00000439089 262 ntBASIC2.13□□□□□ -2.07
LINC00477Q96M19 AL513043.1-201ENST00000439124 535 ntBASIC2.13□□□□□ -2.07
LINC00477Q96M19 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.13□□□□□ -2.07
LINC00477Q96M19 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.13□□□□□ -2.07
LINC00477Q96M19 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.13□□□□□ -2.07
LINC00477Q96M19 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.13□□□□□ -2.07
LINC00477Q96M19 ARPC3P5-201ENST00000448802 534 ntBASIC2.13□□□□□ -2.07
LINC00477Q96M19 SNRPGP6-201ENST00000451124 220 ntBASIC2.13□□□□□ -2.07
LINC00477Q96M19 RPL23AP35-201ENST00000451906 501 ntBASIC2.13□□□□□ -2.07
LINC00477Q96M19 GSTA11P-201ENST00000452866 669 ntBASIC2.13□□□□□ -2.07
LINC00477Q96M19 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.13□□□□□ -2.07
LINC00477Q96M19 USP9YP10-201ENST00000454868 628 ntBASIC2.13□□□□□ -2.07
LINC00477Q96M19 MTCO3P11-201ENST00000455103 774 ntBASIC2.13□□□□□ -2.07
LINC00477Q96M19 MTCO2P6-201ENST00000463134 685 ntBASIC2.13□□□□□ -2.07
LINC00477Q96M19 FTH1P2-201ENST00000466086 412 ntBASIC2.13□□□□□ -2.07
LINC00477Q96M19 AC098862.1-201ENST00000504991 413 ntBASIC2.13□□□□□ -2.07
LINC00477Q96M19 AC117522.3-201ENST00000507974 584 ntBASIC2.13□□□□□ -2.07
LINC00477Q96M19 AC006445.2-201ENST00000510061 472 ntBASIC2.13□□□□□ -2.07
LINC00477Q96M19 MTND5P4-201ENST00000514978 288 ntBASIC2.13□□□□□ -2.07
LINC00477Q96M19 SNORA31.22-201ENST00000517204 135 ntBASIC2.13□□□□□ -2.07
LINC00477Q96M19 AC025881.1-201ENST00000518851 512 ntBASIC2.13□□□□□ -2.07
LINC00477Q96M19 AC060788.1-201ENST00000521318 469 ntBASIC2.13□□□□□ -2.07
LINC00477Q96M19 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.13□□□□□ -2.07
LINC00477Q96M19 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
LINC00477Q96M19 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.13□□□□□ -2.07
LINC00477Q96M19 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
LINC00477Q96M19 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.13□□□□□ -2.07
LINC00477Q96M19 AC012435.1-202ENST00000568772 240 ntBASIC2.13□□□□□ -2.07
LINC00477Q96M19 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.13□□□□□ -2.07
LINC00477Q96M19 WISP1-OT1-201ENST00000602893 642 ntBASIC2.13□□□□□ -2.07
LINC00477Q96M19 AC010738.1-201ENST00000604970 987 ntBASIC2.13□□□□□ -2.07
LINC00477Q96M19 AC090186.1-201ENST00000605991 572 ntBASIC2.13□□□□□ -2.07
LINC00477Q96M19 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.13□□□□□ -2.07
LINC00477Q96M19 AC245517.5-201ENST00000611529 162 ntBASIC2.13□□□□□ -2.07
LINC00477Q96M19 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.13□□□□□ -2.07
LINC00477Q96M19 AC084757.4-201ENST00000616350 526 ntBASIC2.13□□□□□ -2.07
LINC00477Q96M19 AL357080.1-201ENST00000617394 239 ntBASIC2.13□□□□□ -2.07
LINC00477Q96M19 AC091304.6-201ENST00000619761 202 ntBASIC2.13□□□□□ -2.07
LINC00477Q96M19 PCMTD1P7-201ENST00000634506 357 ntBASIC2.13□□□□□ -2.07
LINC00477Q96M19 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.13□□□□□ -2.07
LINC00477Q96M19 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.13□□□□□ -2.07
LINC00477Q96M19 Z82209.1-201ENST00000422141 2135 ntBASIC2.12□□□□□ -2.07
LINC00477Q96M19 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
LINC00477Q96M19 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
LINC00477Q96M19 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
LINC00477Q96M19 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
LINC00477Q96M19 RNU6-500P-201ENST00000362349 107 ntBASIC2.12□□□□□ -2.07
LINC00477Q96M19 SNORA54-201ENST00000384281 123 ntBASIC2.12□□□□□ -2.07
LINC00477Q96M19 RNU6-769P-201ENST00000384407 104 ntBASIC2.12□□□□□ -2.07
LINC00477Q96M19 RNU6-114P-201ENST00000384704 105 ntBASIC2.12□□□□□ -2.07
LINC00477Q96M19 MIR181A2-201ENST00000384863 110 ntBASIC2.12□□□□□ -2.07
LINC00477Q96M19 RNU6-882P-201ENST00000391025 103 ntBASIC2.12□□□□□ -2.07
LINC00477Q96M19 AL590004.2-201ENST00000404787 371 ntBASIC2.12□□□□□ -2.07
LINC00477Q96M19 RNU4-72P-201ENST00000410754 173 ntBASIC2.12□□□□□ -2.07
LINC00477Q96M19 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.12□□□□□ -2.07
LINC00477Q96M19 MTND4P6-201ENST00000438297 472 ntBASIC2.12□□□□□ -2.07
LINC00477Q96M19 RPL26P6-201ENST00000440913 438 ntBASIC2.12□□□□□ -2.07
LINC00477Q96M19 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC2.12□□□□□ -2.07
LINC00477Q96M19 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.12□□□□□ -2.07
LINC00477Q96M19 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.12□□□□□ -2.07
LINC00477Q96M19 ZNF114P1-201ENST00000453500 292 ntBASIC2.12□□□□□ -2.07
LINC00477Q96M19 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.12□□□□□ -2.07
LINC00477Q96M19 AC008571.1-201ENST00000467232 300 ntBASIC2.12□□□□□ -2.07
LINC00477Q96M19 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.12□□□□□ -2.07
LINC00477Q96M19 AC006445.1-201ENST00000491925 405 ntBASIC2.12□□□□□ -2.07
LINC00477Q96M19 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.12□□□□□ -2.07
LINC00477Q96M19 OR5BM1P-201ENST00000512021 366 ntBASIC2.12□□□□□ -2.07
LINC00477Q96M19 RNA5SP76-201ENST00000516277 87 ntBASIC2.12□□□□□ -2.07
LINC00477Q96M19 RNU6-528P-201ENST00000516926 100 ntBASIC2.12□□□□□ -2.07
LINC00477Q96M19 RNU1-104P-201ENST00000517280 175 ntBASIC2.12□□□□□ -2.07
LINC00477Q96M19 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.12□□□□□ -2.07
LINC00477Q96M19 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.12□□□□□ -2.07
LINC00477Q96M19 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.12□□□□□ -2.07
LINC00477Q96M19 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.12□□□□□ -2.07
LINC00477Q96M19 ROCK1P1-201ENST00000573767 549 ntBASIC2.12□□□□□ -2.07
LINC00477Q96M19 AC005951.2-201ENST00000576282 495 ntBASIC2.12□□□□□ -2.07
LINC00477Q96M19 ISCA1P3-201ENST00000577104 373 ntBASIC2.12□□□□□ -2.07
LINC00477Q96M19 MTCO3P13-201ENST00000577757 781 ntBASIC2.12□□□□□ -2.07
LINC00477Q96M19 AL353997.4-201ENST00000586196 166 ntBASIC2.12□□□□□ -2.07
LINC00477Q96M19 AP001429.1-201ENST00000602568 530 ntBASIC2.12□□□□□ -2.07
LINC00477Q96M19 DUXAP11-201ENST00000603858 526 ntBASIC2.12□□□□□ -2.07
LINC00477Q96M19 AL161756.2-201ENST00000604597 246 ntBASIC2.12□□□□□ -2.07
LINC00477Q96M19 AL035413.2-201ENST00000604801 525 ntBASIC2.12□□□□□ -2.07
LINC00477Q96M19 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
LINC00477Q96M19 AL136363.1-201ENST00000605349 337 ntBASIC2.12□□□□□ -2.07
LINC00477Q96M19 AC108747.1-201ENST00000609508 535 ntBASIC2.12□□□□□ -2.07
LINC00477Q96M19 AC004223.4-201ENST00000612426 332 ntBASIC2.12□□□□□ -2.07
LINC00477Q96M19 AL161629.2-201ENST00000615347 275 ntBASIC2.12□□□□□ -2.07
LINC00477Q96M19 AL450472.3-201ENST00000615578 367 ntBASIC2.12□□□□□ -2.07
LINC00477Q96M19 ATP5A1P2-202ENST00000616464 443 ntBASIC2.12□□□□□ -2.07
LINC00477Q96M19 AC104010.1-201ENST00000616889 150 ntBASIC2.12□□□□□ -2.07
LINC00477Q96M19 AC010297.1-201ENST00000623948 149 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms