Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
CHAMP1Q96JM3 FAM35DP-201ENST00000323387 2712 ntBASIC4.71□□□□□ -1.66
CHAMP1Q96JM3 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CHAMP1Q96JM3 MTND4P14-201ENST00000435799 1354 ntBASIC4.71□□□□□ -1.66
CHAMP1Q96JM3 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.71□□□□□ -1.66
CHAMP1Q96JM3 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CHAMP1Q96JM3 Y_RNA.132-201ENST00000363421 102 ntBASIC4.71□□□□□ -1.66
CHAMP1Q96JM3 Y_RNA.373-201ENST00000365600 103 ntBASIC4.71□□□□□ -1.66
CHAMP1Q96JM3 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CHAMP1Q96JM3 Y_RNA.387-201ENST00000383918 102 ntBASIC4.71□□□□□ -1.66
CHAMP1Q96JM3 RNU6-637P-201ENST00000384050 107 ntBASIC4.71□□□□□ -1.66
CHAMP1Q96JM3 RNU6-432P-201ENST00000384196 109 ntBASIC4.71□□□□□ -1.66
CHAMP1Q96JM3 Y_RNA.493-201ENST00000384422 102 ntBASIC4.71□□□□□ -1.66
CHAMP1Q96JM3 AL359634.1-202ENST00000404721 284 ntBASIC4.71□□□□□ -1.66
CHAMP1Q96JM3 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.71□□□□□ -1.66
CHAMP1Q96JM3 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.71□□□□□ -1.66
CHAMP1Q96JM3 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.71□□□□□ -1.66
CHAMP1Q96JM3 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.71□□□□□ -1.66
CHAMP1Q96JM3 RPS3AP12-201ENST00000443616 753 ntBASIC4.71□□□□□ -1.66
CHAMP1Q96JM3 PRPS1P1-201ENST00000445305 876 ntBASIC4.71□□□□□ -1.66
CHAMP1Q96JM3 PRSS3P4-201ENST00000453323 162 ntBASIC4.71□□□□□ -1.66
CHAMP1Q96JM3 RPL23AP24-201ENST00000458203 385 ntBASIC4.71□□□□□ -1.66
CHAMP1Q96JM3 SNORD19B-201ENST00000459623 84 ntBASIC4.71□□□□□ -1.66
CHAMP1Q96JM3 RN7SL303P-201ENST00000469773 251 ntBASIC4.71□□□□□ -1.66
CHAMP1Q96JM3 MTND4P17-201ENST00000470444 350 ntBASIC4.71□□□□□ -1.66
CHAMP1Q96JM3 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
CHAMP1Q96JM3 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.71□□□□□ -1.66
CHAMP1Q96JM3 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.71□□□□□ -1.66
CHAMP1Q96JM3 RN7SKP234-201ENST00000517173 224 ntBASIC4.71□□□□□ -1.66
CHAMP1Q96JM3 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.71□□□□□ -1.66
CHAMP1Q96JM3 AC020661.2-201ENST00000560114 134 ntBASIC4.71□□□□□ -1.66
CHAMP1Q96JM3 POLR3GP2-201ENST00000588366 668 ntBASIC4.71□□□□□ -1.66
CHAMP1Q96JM3 AL669831.4-202ENST00000590817 238 ntBASIC4.71□□□□□ -1.66
CHAMP1Q96JM3 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.71□□□□□ -1.66
CHAMP1Q96JM3 CTHRC1P1-201ENST00000605383 469 ntBASIC4.71□□□□□ -1.66
CHAMP1Q96JM3 AC103710.3-201ENST00000608157 948 ntBASIC4.71□□□□□ -1.66
CHAMP1Q96JM3 MIR7151-201ENST00000617477 60 ntBASIC4.71□□□□□ -1.66
CHAMP1Q96JM3 uc_338.11-201ENST00000619132 160 ntBASIC4.71□□□□□ -1.66
CHAMP1Q96JM3 MIR7702-201ENST00000621931 59 ntBASIC4.71□□□□□ -1.66
CHAMP1Q96JM3 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
CHAMP1Q96JM3 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CHAMP1Q96JM3 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CHAMP1Q96JM3 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.71□□□□□ -1.66
CHAMP1Q96JM3 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CHAMP1Q96JM3 AC006971.1-201ENST00000407916 4486 ntBASIC4.7□□□□□ -1.66
CHAMP1Q96JM3 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CHAMP1Q96JM3 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.7□□□□□ -1.66
CHAMP1Q96JM3 Y_RNA.111-201ENST00000363248 100 ntBASIC4.7□□□□□ -1.66
CHAMP1Q96JM3 RNU6-179P-201ENST00000363350 107 ntBASIC4.7□□□□□ -1.66
CHAMP1Q96JM3 SOD2P1-201ENST00000396543 562 ntBASIC4.7□□□□□ -1.66
CHAMP1Q96JM3 AL109755.1-201ENST00000401791 649 ntBASIC4.7□□□□□ -1.66
CHAMP1Q96JM3 OR6C66P-201ENST00000414917 930 ntBASIC4.7□□□□□ -1.66
CHAMP1Q96JM3 AL590609.2-201ENST00000421430 368 ntBASIC4.7□□□□□ -1.66
CHAMP1Q96JM3 AF228730.2-201ENST00000438784 848 ntBASIC4.7□□□□□ -1.66
CHAMP1Q96JM3 AC020550.1-201ENST00000447385 163 ntBASIC4.7□□□□□ -1.66
CHAMP1Q96JM3 GAPDHP27-201ENST00000447427 1020 ntBASIC4.7□□□□□ -1.66
CHAMP1Q96JM3 PPIAP3-201ENST00000450588 505 ntBASIC4.7□□□□□ -1.66
CHAMP1Q96JM3 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.7□□□□□ -1.66
CHAMP1Q96JM3 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.7□□□□□ -1.66
CHAMP1Q96JM3 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.7□□□□□ -1.66
CHAMP1Q96JM3 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.7□□□□□ -1.66
CHAMP1Q96JM3 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.7□□□□□ -1.66
CHAMP1Q96JM3 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.7□□□□□ -1.66
CHAMP1Q96JM3 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.7□□□□□ -1.66
CHAMP1Q96JM3 RNU6-1038P-201ENST00000516516 104 ntBASIC4.7□□□□□ -1.66
CHAMP1Q96JM3 RNU6-1092P-201ENST00000516955 87 ntBASIC4.7□□□□□ -1.66
CHAMP1Q96JM3 AC100870.1-201ENST00000522035 505 ntBASIC4.7□□□□□ -1.66
CHAMP1Q96JM3 PTP4A1P6-201ENST00000531034 478 ntBASIC4.7□□□□□ -1.66
CHAMP1Q96JM3 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.7□□□□□ -1.66
CHAMP1Q96JM3 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.7□□□□□ -1.66
CHAMP1Q96JM3 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.7□□□□□ -1.66
CHAMP1Q96JM3 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.7□□□□□ -1.66
CHAMP1Q96JM3 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.7□□□□□ -1.66
CHAMP1Q96JM3 MIR5583-1-201ENST00000580941 59 ntBASIC4.7□□□□□ -1.66
CHAMP1Q96JM3 BNIP3P25-201ENST00000596023 559 ntBASIC4.7□□□□□ -1.66
CHAMP1Q96JM3 AL022099.1-201ENST00000604551 712 ntBASIC4.7□□□□□ -1.66
CHAMP1Q96JM3 AL008729.2-201ENST00000606393 473 ntBASIC4.7□□□□□ -1.66
CHAMP1Q96JM3 AL022345.1-201ENST00000607292 135 ntBASIC4.7□□□□□ -1.66
CHAMP1Q96JM3 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.7□□□□□ -1.66
CHAMP1Q96JM3 AC025034.2-201ENST00000623264 286 ntBASIC4.7□□□□□ -1.66
CHAMP1Q96JM3 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.7□□□□□ -1.66
CHAMP1Q96JM3 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.7□□□□□ -1.66
CHAMP1Q96JM3 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CHAMP1Q96JM3 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.7□□□□□ -1.66
CHAMP1Q96JM3 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CHAMP1Q96JM3 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
CHAMP1Q96JM3 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.7□□□□□ -1.66
CHAMP1Q96JM3 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CHAMP1Q96JM3 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CHAMP1Q96JM3 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CHAMP1Q96JM3 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CHAMP1Q96JM3 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
CHAMP1Q96JM3 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CHAMP1Q96JM3 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CHAMP1Q96JM3 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.69□□□□□ -1.66
CHAMP1Q96JM3 Y_RNA.339-201ENST00000365325 102 ntBASIC4.69□□□□□ -1.66
CHAMP1Q96JM3 Y_RNA.378-201ENST00000365652 113 ntBASIC4.69□□□□□ -1.66
CHAMP1Q96JM3 Y_RNA.576-201ENST00000384781 102 ntBASIC4.69□□□□□ -1.66
CHAMP1Q96JM3 AL353729.1-201ENST00000425044 720 ntBASIC4.69□□□□□ -1.66
CHAMP1Q96JM3 AL138785.1-201ENST00000425821 331 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms