Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC020890.1-201ENST00000491837 504 ntBASIC5.95□□□□□ -1.46
LRCH3Q96II8 AC018442.3-201ENST00000523025 183 ntBASIC5.95□□□□□ -1.46
LRCH3Q96II8 DEFB131C-201ENST00000528817 165 ntBASIC5.95□□□□□ -1.46
LRCH3Q96II8 AC023575.1-201ENST00000580510 358 ntBASIC5.95□□□□□ -1.46
LRCH3Q96II8 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.95□□□□□ -1.46
LRCH3Q96II8 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.95□□□□□ -1.46
LRCH3Q96II8 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
LRCH3Q96II8 KLKP1-201ENST00000595979 403 ntBASIC5.95□□□□□ -1.46
LRCH3Q96II8 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.95□□□□□ -1.46
LRCH3Q96II8 AC004825.2-201ENST00000616634 455 ntBASIC5.95□□□□□ -1.46
LRCH3Q96II8 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.95□□□□□ -1.46
LRCH3Q96II8 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC5.95□□□□□ -1.46
LRCH3Q96II8 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
LRCH3Q96II8 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
LRCH3Q96II8 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
LRCH3Q96II8 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
LRCH3Q96II8 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
LRCH3Q96II8 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.95□□□□□ -1.46
LRCH3Q96II8 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
LRCH3Q96II8 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LRCH3Q96II8 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.94□□□□□ -1.46
LRCH3Q96II8 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LRCH3Q96II8 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LRCH3Q96II8 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
LRCH3Q96II8 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.94□□□□□ -1.46
LRCH3Q96II8 AC138907.8-201ENST00000623981 2256 ntBASIC5.94□□□□□ -1.46
LRCH3Q96II8 RNA5SP515-201ENST00000364570 118 ntBASIC5.94□□□□□ -1.46
LRCH3Q96II8 Y_RNA.563-201ENST00000384707 108 ntBASIC5.94□□□□□ -1.46
LRCH3Q96II8 LAP3P1-201ENST00000403648 294 ntBASIC5.94□□□□□ -1.46
LRCH3Q96II8 RNU6-1064P-201ENST00000410626 104 ntBASIC5.94□□□□□ -1.46
LRCH3Q96II8 RPL7AP73-201ENST00000413490 353 ntBASIC5.94□□□□□ -1.46
LRCH3Q96II8 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.94□□□□□ -1.46
LRCH3Q96II8 PPP1R11P2-201ENST00000423543 382 ntBASIC5.94□□□□□ -1.46
LRCH3Q96II8 AC011742.1-201ENST00000431448 434 ntBASIC5.94□□□□□ -1.46
LRCH3Q96II8 AC090774.1-201ENST00000435925 246 ntBASIC5.94□□□□□ -1.46
LRCH3Q96II8 AL590399.4-201ENST00000436561 601 ntBASIC5.94□□□□□ -1.46
LRCH3Q96II8 RPL23AP40-201ENST00000487630 390 ntBASIC5.94□□□□□ -1.46
LRCH3Q96II8 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC5.94□□□□□ -1.46
LRCH3Q96II8 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC5.94□□□□□ -1.46
LRCH3Q96II8 RNU7-121P-201ENST00000516604 62 ntBASIC5.94□□□□□ -1.46
LRCH3Q96II8 IGKV2D-36-201ENST00000518643 226 ntBASIC5.94□□□□□ -1.46
LRCH3Q96II8 AC021006.3-201ENST00000530771 192 ntBASIC5.94□□□□□ -1.46
LRCH3Q96II8 HMGB1P14-201ENST00000557424 591 ntBASIC5.94□□□□□ -1.46
LRCH3Q96II8 AC010928.2-201ENST00000588017 287 ntBASIC5.94□□□□□ -1.46
LRCH3Q96II8 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC5.94□□□□□ -1.46
LRCH3Q96II8 MIR6129-201ENST00000616087 109 ntBASIC5.94□□□□□ -1.46
LRCH3Q96II8 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
LRCH3Q96II8 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC5.94□□□□□ -1.46
LRCH3Q96II8 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.94□□□□□ -1.46
LRCH3Q96II8 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
LRCH3Q96II8 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LRCH3Q96II8 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.94□□□□□ -1.46
LRCH3Q96II8 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LRCH3Q96II8 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
LRCH3Q96II8 OR9K1P-202ENST00000641111 3217 ntBASIC5.93□□□□□ -1.46
LRCH3Q96II8 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.93□□□□□ -1.46
LRCH3Q96II8 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LRCH3Q96II8 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.93□□□□□ -1.46
LRCH3Q96II8 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LRCH3Q96II8 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
LRCH3Q96II8 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
LRCH3Q96II8 SNURFL-201ENST00000309296 343 ntBASIC5.93□□□□□ -1.46
LRCH3Q96II8 RNA5SP361-201ENST00000362686 118 ntBASIC5.93□□□□□ -1.46
LRCH3Q96II8 Y_RNA.121-201ENST00000363309 113 ntBASIC5.93□□□□□ -1.46
LRCH3Q96II8 RNU6-755P-201ENST00000364400 103 ntBASIC5.93□□□□□ -1.46
LRCH3Q96II8 RNU4-9P-201ENST00000364951 139 ntBASIC5.93□□□□□ -1.46
LRCH3Q96II8 Y_RNA.309-201ENST00000365046 111 ntBASIC5.93□□□□□ -1.46
LRCH3Q96II8 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.93□□□□□ -1.46
LRCH3Q96II8 AL359837.1-201ENST00000381357 287 ntBASIC5.93□□□□□ -1.46
LRCH3Q96II8 Y_RNA.542-201ENST00000384641 111 ntBASIC5.93□□□□□ -1.46
LRCH3Q96II8 RNA5SP332-201ENST00000391063 115 ntBASIC5.93□□□□□ -1.46
LRCH3Q96II8 MIR513C-201ENST00000401352 84 ntBASIC5.93□□□□□ -1.46
LRCH3Q96II8 snoU13.1-201ENST00000459157 104 ntBASIC5.93□□□□□ -1.46
LRCH3Q96II8 AC012158.1-204ENST00000483430 465 ntBASIC5.93□□□□□ -1.46
LRCH3Q96II8 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.93□□□□□ -1.46
LRCH3Q96II8 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC5.93□□□□□ -1.46
LRCH3Q96II8 RNU6-659P-201ENST00000516454 104 ntBASIC5.93□□□□□ -1.46
LRCH3Q96II8 RNU6-1315P-201ENST00000517187 99 ntBASIC5.93□□□□□ -1.46
LRCH3Q96II8 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC5.93□□□□□ -1.46
LRCH3Q96II8 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.93□□□□□ -1.46
LRCH3Q96II8 MIR4737-201ENST00000583979 81 ntBASIC5.93□□□□□ -1.46
LRCH3Q96II8 AC006001.4-201ENST00000622243 395 ntBASIC5.93□□□□□ -1.46
LRCH3Q96II8 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC5.93□□□□□ -1.46
LRCH3Q96II8 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.93□□□□□ -1.46
LRCH3Q96II8 snoU18.1-201ENST00000629629 71 ntBASIC5.93□□□□□ -1.46
LRCH3Q96II8 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.93□□□□□ -1.46
LRCH3Q96II8 MIR6830-201ENST00000636015 70 ntBASIC5.93□□□□□ -1.46
LRCH3Q96II8 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LRCH3Q96II8 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LRCH3Q96II8 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.93□□□□□ -1.46
LRCH3Q96II8 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
LRCH3Q96II8 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LRCH3Q96II8 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC5.92□□□□□ -1.46
LRCH3Q96II8 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.92□□□□□ -1.46
LRCH3Q96II8 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
LRCH3Q96II8 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
LRCH3Q96II8 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
LRCH3Q96II8 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
LRCH3Q96II8 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.92□□□□□ -1.46
LRCH3Q96II8 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms