Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 MTATP6P30-201ENST00000443540 664 ntBASIC3.09□□□□□ -1.91
VMP1Q96GC9 DPPA3P1-201ENST00000448050 469 ntBASIC3.09□□□□□ -1.91
VMP1Q96GC9 RN7SL807P-201ENST00000470923 297 ntBASIC3.09□□□□□ -1.91
VMP1Q96GC9 AC103975.1-201ENST00000482506 483 ntBASIC3.09□□□□□ -1.91
VMP1Q96GC9 AC055855.1-201ENST00000489563 579 ntBASIC3.09□□□□□ -1.91
VMP1Q96GC9 RNU6-311P-201ENST00000516224 102 ntBASIC3.09□□□□□ -1.91
VMP1Q96GC9 RNU5A-4P-201ENST00000516588 111 ntBASIC3.09□□□□□ -1.91
VMP1Q96GC9 AC100870.1-201ENST00000522035 505 ntBASIC3.09□□□□□ -1.91
VMP1Q96GC9 AP000907.2-201ENST00000530827 353 ntBASIC3.09□□□□□ -1.91
VMP1Q96GC9 AC013828.2-201ENST00000532487 235 ntBASIC3.09□□□□□ -1.91
VMP1Q96GC9 AC005476.1-201ENST00000554427 397 ntBASIC3.09□□□□□ -1.91
VMP1Q96GC9 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.09□□□□□ -1.91
VMP1Q96GC9 NRBF2P5-201ENST00000603087 788 ntBASIC3.09□□□□□ -1.91
VMP1Q96GC9 AL162713.1-201ENST00000604480 262 ntBASIC3.09□□□□□ -1.91
VMP1Q96GC9 AC012468.1-201ENST00000604888 430 ntBASIC3.09□□□□□ -1.91
VMP1Q96GC9 AC013562.2-201ENST00000611632 603 ntBASIC3.09□□□□□ -1.91
VMP1Q96GC9 AL359198.2-201ENST00000611836 194 ntBASIC3.09□□□□□ -1.91
VMP1Q96GC9 AC022960.3-201ENST00000619794 441 ntBASIC3.09□□□□□ -1.91
VMP1Q96GC9 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.09□□□□□ -1.91
VMP1Q96GC9 LRRC77P-213ENST00000637727 880 ntBASIC3.09□□□□□ -1.91
VMP1Q96GC9 MIR7515-201ENST00000637837 67 ntBASIC3.09□□□□□ -1.91
VMP1Q96GC9 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
VMP1Q96GC9 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.92
VMP1Q96GC9 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.09□□□□□ -1.92
VMP1Q96GC9 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
VMP1Q96GC9 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.09□□□□□ -1.92
VMP1Q96GC9 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
VMP1Q96GC9 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
VMP1Q96GC9 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
VMP1Q96GC9 MTND5P29-201ENST00000458676 1807 ntBASIC3.08□□□□□ -1.92
VMP1Q96GC9 RNU6-769P-201ENST00000384407 104 ntBASIC3.08□□□□□ -1.92
VMP1Q96GC9 MTND4P13-201ENST00000402078 1023 ntBASIC3.08□□□□□ -1.92
VMP1Q96GC9 AL513475.1-201ENST00000406602 315 ntBASIC3.08□□□□□ -1.92
VMP1Q96GC9 RN7SKP58-201ENST00000411010 305 ntBASIC3.08□□□□□ -1.92
VMP1Q96GC9 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.08□□□□□ -1.92
VMP1Q96GC9 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.08□□□□□ -1.92
VMP1Q96GC9 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.08□□□□□ -1.92
VMP1Q96GC9 AC005300.1-201ENST00000428401 373 ntBASIC3.08□□□□□ -1.92
VMP1Q96GC9 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.08□□□□□ -1.92
VMP1Q96GC9 GTF2IP9-201ENST00000502460 301 ntBASIC3.08□□□□□ -1.92
VMP1Q96GC9 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.08□□□□□ -1.92
VMP1Q96GC9 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
VMP1Q96GC9 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.08□□□□□ -1.92
VMP1Q96GC9 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.08□□□□□ -1.92
VMP1Q96GC9 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
VMP1Q96GC9 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.08□□□□□ -1.92
VMP1Q96GC9 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.08□□□□□ -1.92
VMP1Q96GC9 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.08□□□□□ -1.92
VMP1Q96GC9 AL359212.1-201ENST00000556608 614 ntBASIC3.08□□□□□ -1.92
VMP1Q96GC9 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.08□□□□□ -1.92
VMP1Q96GC9 CKS1BP3-201ENST00000600888 237 ntBASIC3.08□□□□□ -1.92
VMP1Q96GC9 AL157817.1-201ENST00000614264 790 ntBASIC3.08□□□□□ -1.92
VMP1Q96GC9 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.08□□□□□ -1.92
VMP1Q96GC9 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.08□□□□□ -1.92
VMP1Q96GC9 AL078595.3-201ENST00000623815 1166 ntBASIC3.08□□□□□ -1.92
VMP1Q96GC9 AC091965.5-201ENST00000624785 342 ntBASIC3.08□□□□□ -1.92
VMP1Q96GC9 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.08□□□□□ -1.92
VMP1Q96GC9 AC084035.1-201ENST00000634543 607 ntBASIC3.08□□□□□ -1.92
VMP1Q96GC9 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
VMP1Q96GC9 ZNF876P-202ENST00000398732 1485 ntBASIC3.08□□□□□ -1.92
VMP1Q96GC9 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
VMP1Q96GC9 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
VMP1Q96GC9 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
VMP1Q96GC9 AL353743.1-202ENST00000431724 1695 ntBASIC3.08□□□□□ -1.92
VMP1Q96GC9 AC073346.2-201ENST00000624724 2058 ntBASIC3.07□□□□□ -1.92
VMP1Q96GC9 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
VMP1Q96GC9 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
VMP1Q96GC9 VTRNA1-1-201ENST00000363120 99 ntBASIC3.07□□□□□ -1.92
VMP1Q96GC9 RNU6-1167P-201ENST00000363227 94 ntBASIC3.07□□□□□ -1.92
VMP1Q96GC9 RNA5SP387-201ENST00000364226 106 ntBASIC3.07□□□□□ -1.92
VMP1Q96GC9 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.07□□□□□ -1.92
VMP1Q96GC9 RNU2-49P-201ENST00000410666 184 ntBASIC3.07□□□□□ -1.92
VMP1Q96GC9 AC010153.1-201ENST00000432862 727 ntBASIC3.07□□□□□ -1.92
VMP1Q96GC9 MTND1P28-201ENST00000435623 950 ntBASIC3.07□□□□□ -1.92
VMP1Q96GC9 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.07□□□□□ -1.92
VMP1Q96GC9 AC006028.1-201ENST00000438379 402 ntBASIC3.07□□□□□ -1.92
VMP1Q96GC9 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.07□□□□□ -1.92
VMP1Q96GC9 AC005094.1-201ENST00000440420 368 ntBASIC3.07□□□□□ -1.92
VMP1Q96GC9 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.07□□□□□ -1.92
VMP1Q96GC9 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.07□□□□□ -1.92
VMP1Q96GC9 CECR9-201ENST00000453421 199 ntBASIC3.07□□□□□ -1.92
VMP1Q96GC9 RPL37P6-201ENST00000460682 294 ntBASIC3.07□□□□□ -1.92
VMP1Q96GC9 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.07□□□□□ -1.92
VMP1Q96GC9 AC021678.1-201ENST00000505195 936 ntBASIC3.07□□□□□ -1.92
VMP1Q96GC9 RN7SKP258-201ENST00000517151 304 ntBASIC3.07□□□□□ -1.92
VMP1Q96GC9 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
VMP1Q96GC9 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.07□□□□□ -1.92
VMP1Q96GC9 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.07□□□□□ -1.92
VMP1Q96GC9 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.07□□□□□ -1.92
VMP1Q96GC9 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.07□□□□□ -1.92
VMP1Q96GC9 AC090616.3-201ENST00000582184 217 ntBASIC3.07□□□□□ -1.92
VMP1Q96GC9 BNIP3P39-201ENST00000601077 554 ntBASIC3.07□□□□□ -1.92
VMP1Q96GC9 BCRP9-201ENST00000605312 388 ntBASIC3.07□□□□□ -1.92
VMP1Q96GC9 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.07□□□□□ -1.92
VMP1Q96GC9 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.07□□□□□ -1.92
VMP1Q96GC9 AC245517.5-201ENST00000611529 162 ntBASIC3.07□□□□□ -1.92
VMP1Q96GC9 AL139418.1-201ENST00000613613 177 ntBASIC3.07□□□□□ -1.92
VMP1Q96GC9 AC034102.8-201ENST00000615146 484 ntBASIC3.07□□□□□ -1.92
VMP1Q96GC9 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
VMP1Q96GC9 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms