Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 RNY4P16-201ENST00000364768 94 ntBASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 RNU6-882P-201ENST00000391025 103 ntBASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 RNU6-192P-201ENST00000391253 100 ntBASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 AL031121.1-201ENST00000406553 254 ntBASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 RNA5SP129-201ENST00000410276 118 ntBASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 RNU2-43P-201ENST00000410306 190 ntBASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 RNU6-195P-201ENST00000411352 109 ntBASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 HMGN1P24-201ENST00000412282 298 ntBASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 MTND1P21-201ENST00000412991 285 ntBASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 DBIP2-201ENST00000419076 262 ntBASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 AC104651.1-201ENST00000427559 735 ntBASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 ISCA1P6-201ENST00000427740 390 ntBASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 AC079780.1-201ENST00000428259 207 ntBASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 AL445584.1-201ENST00000431451 330 ntBASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 ARPC3P1-201ENST00000437218 533 ntBASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 MTND1P34-201ENST00000438556 671 ntBASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 AC009969.1-201ENST00000438726 172 ntBASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 HMGB3P11-201ENST00000440127 604 ntBASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 AC092473.1-201ENST00000441098 221 ntBASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 NOTCH2P1-201ENST00000443481 624 ntBASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 ELOCP30-201ENST00000447108 299 ntBASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 MTCYBP1-201ENST00000454315 1119 ntBASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 RN7SKP13-201ENST00000515933 244 ntBASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 RN7SKP18-201ENST00000516005 275 ntBASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 RNU6-720P-201ENST00000516363 108 ntBASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 SNORA70.18-201ENST00000516696 98 ntBASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 RNU6-1073P-201ENST00000517182 106 ntBASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 AC068657.1-201ENST00000520807 306 ntBASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 AC107934.1-201ENST00000522215 217 ntBASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 MIR3118-1-201ENST00000581787 76 ntBASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 NRBF2P1-201ENST00000587407 859 ntBASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 AC006116.10-201ENST00000591836 581 ntBASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 AC078899.3-201ENST00000599065 212 ntBASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 MIR7851-201ENST00000610611 160 ntBASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 AC072046.2-201ENST00000618366 268 ntBASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 MIR6130-201ENST00000619419 109 ntBASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 AC015967.1-201ENST00000619893 476 ntBASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.2□□□□□ -1.9
SLC47A1Q96FL8 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
SLC47A1Q96FL8 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SLC47A1Q96FL8 RNU6-50P-201ENST00000362356 103 ntBASIC3.19□□□□□ -1.9
SLC47A1Q96FL8 RNU5A-6P-201ENST00000384136 116 ntBASIC3.19□□□□□ -1.9
SLC47A1Q96FL8 RNU6-432P-201ENST00000384196 109 ntBASIC3.19□□□□□ -1.9
SLC47A1Q96FL8 Y_RNA.582-201ENST00000391023 95 ntBASIC3.19□□□□□ -1.9
SLC47A1Q96FL8 RNU2-8P-201ENST00000410727 190 ntBASIC3.19□□□□□ -1.9
SLC47A1Q96FL8 AL031779.1-201ENST00000415663 330 ntBASIC3.19□□□□□ -1.9
SLC47A1Q96FL8 MTCO1P21-201ENST00000416634 589 ntBASIC3.19□□□□□ -1.9
SLC47A1Q96FL8 AC019097.1-201ENST00000424783 735 ntBASIC3.19□□□□□ -1.9
SLC47A1Q96FL8 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.19□□□□□ -1.9
SLC47A1Q96FL8 TIMM9P1-201ENST00000436122 256 ntBASIC3.19□□□□□ -1.9
SLC47A1Q96FL8 RPL35AP22-201ENST00000436855 335 ntBASIC3.19□□□□□ -1.9
SLC47A1Q96FL8 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.19□□□□□ -1.9
SLC47A1Q96FL8 AC140076.1-201ENST00000449897 361 ntBASIC3.19□□□□□ -1.9
SLC47A1Q96FL8 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.19□□□□□ -1.9
SLC47A1Q96FL8 AC108059.3-201ENST00000456388 214 ntBASIC3.19□□□□□ -1.9
SLC47A1Q96FL8 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.19□□□□□ -1.9
SLC47A1Q96FL8 HMGB1P22-201ENST00000505315 124 ntBASIC3.19□□□□□ -1.9
SLC47A1Q96FL8 RNA5SP385-201ENST00000515947 110 ntBASIC3.19□□□□□ -1.9
SLC47A1Q96FL8 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.19□□□□□ -1.9
SLC47A1Q96FL8 AP003033.1-201ENST00000527244 415 ntBASIC3.19□□□□□ -1.9
SLC47A1Q96FL8 AP000857.1-201ENST00000532151 543 ntBASIC3.19□□□□□ -1.9
SLC47A1Q96FL8 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SLC47A1Q96FL8 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.19□□□□□ -1.9
SLC47A1Q96FL8 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.19□□□□□ -1.9
SLC47A1Q96FL8 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.19□□□□□ -1.9
SLC47A1Q96FL8 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.19□□□□□ -1.9
SLC47A1Q96FL8 AL133153.1-201ENST00000557756 303 ntBASIC3.19□□□□□ -1.9
SLC47A1Q96FL8 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.19□□□□□ -1.9
SLC47A1Q96FL8 AC012182.1-201ENST00000570133 895 ntBASIC3.19□□□□□ -1.9
SLC47A1Q96FL8 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.19□□□□□ -1.9
SLC47A1Q96FL8 AC067852.3-201ENST00000589177 561 ntBASIC3.19□□□□□ -1.9
SLC47A1Q96FL8 DEFB131E-202ENST00000602581 683 ntBASIC3.19□□□□□ -1.9
SLC47A1Q96FL8 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.19□□□□□ -1.9
SLC47A1Q96FL8 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SLC47A1Q96FL8 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.19□□□□□ -1.9
SLC47A1Q96FL8 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.19□□□□□ -1.9
SLC47A1Q96FL8 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
SLC47A1Q96FL8 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
SLC47A1Q96FL8 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.19□□□□□ -1.9
SLC47A1Q96FL8 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
SLC47A1Q96FL8 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms