Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 AC106038.2-201ENST00000520706 568 ntBASIC3.58□□□□□ -1.84
SKA1Q96BD8 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.58□□□□□ -1.84
SKA1Q96BD8 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
SKA1Q96BD8 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
SKA1Q96BD8 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.58□□□□□ -1.84
SKA1Q96BD8 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.58□□□□□ -1.84
SKA1Q96BD8 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.58□□□□□ -1.84
SKA1Q96BD8 ZNF519P3-201ENST00000557158 1032 ntBASIC3.58□□□□□ -1.84
SKA1Q96BD8 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC3.58□□□□□ -1.84
SKA1Q96BD8 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.58□□□□□ -1.84
SKA1Q96BD8 AC083760.1-201ENST00000589621 670 ntBASIC3.58□□□□□ -1.84
SKA1Q96BD8 DPPA3P3-201ENST00000603842 430 ntBASIC3.58□□□□□ -1.84
SKA1Q96BD8 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.58□□□□□ -1.84
SKA1Q96BD8 AL732618.1-201ENST00000623251 301 ntBASIC3.58□□□□□ -1.84
SKA1Q96BD8 AC110079.1-202ENST00000635213 138 ntBASIC3.58□□□□□ -1.84
SKA1Q96BD8 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.58□□□□□ -1.84
SKA1Q96BD8 API5P2-201ENST00000397055 1498 ntBASIC3.58□□□□□ -1.84
SKA1Q96BD8 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.58□□□□□ -1.84
SKA1Q96BD8 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SKA1Q96BD8 MTND5P29-201ENST00000458676 1807 ntBASIC3.58□□□□□ -1.84
SKA1Q96BD8 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.58□□□□□ -1.84
SKA1Q96BD8 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
SKA1Q96BD8 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SKA1Q96BD8 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.57□□□□□ -1.84
SKA1Q96BD8 RNU1-75P-201ENST00000347264 129 ntBASIC3.57□□□□□ -1.84
SKA1Q96BD8 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SKA1Q96BD8 SNORA38.1-201ENST00000364172 131 ntBASIC3.57□□□□□ -1.84
SKA1Q96BD8 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SKA1Q96BD8 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.57□□□□□ -1.84
SKA1Q96BD8 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.57□□□□□ -1.84
SKA1Q96BD8 AL049545.1-201ENST00000401856 572 ntBASIC3.57□□□□□ -1.84
SKA1Q96BD8 NDUFS5P1-201ENST00000405668 289 ntBASIC3.57□□□□□ -1.84
SKA1Q96BD8 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
SKA1Q96BD8 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SKA1Q96BD8 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.57□□□□□ -1.84
SKA1Q96BD8 AL645937.1-202ENST00000421799 937 ntBASIC3.57□□□□□ -1.84
SKA1Q96BD8 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.57□□□□□ -1.84
SKA1Q96BD8 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.57□□□□□ -1.84
SKA1Q96BD8 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.57□□□□□ -1.84
SKA1Q96BD8 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.57□□□□□ -1.84
SKA1Q96BD8 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.57□□□□□ -1.84
SKA1Q96BD8 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.57□□□□□ -1.84
SKA1Q96BD8 AL139824.2-201ENST00000458731 1095 ntBASIC3.57□□□□□ -1.84
SKA1Q96BD8 SNORD97-201ENST00000459187 142 ntBASIC3.57□□□□□ -1.84
SKA1Q96BD8 AP000797.1-201ENST00000478870 387 ntBASIC3.57□□□□□ -1.84
SKA1Q96BD8 AC092104.1-201ENST00000497346 1441 ntBASIC3.57□□□□□ -1.84
SKA1Q96BD8 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.57□□□□□ -1.84
SKA1Q96BD8 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.57□□□□□ -1.84
SKA1Q96BD8 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.57□□□□□ -1.84
SKA1Q96BD8 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.57□□□□□ -1.84
SKA1Q96BD8 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.57□□□□□ -1.84
SKA1Q96BD8 AC090888.1-201ENST00000561335 1141 ntBASIC3.57□□□□□ -1.84
SKA1Q96BD8 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.57□□□□□ -1.84
SKA1Q96BD8 AC008507.1-201ENST00000587506 734 ntBASIC3.57□□□□□ -1.84
SKA1Q96BD8 AC105129.3-201ENST00000605455 485 ntBASIC3.57□□□□□ -1.84
SKA1Q96BD8 AC092354.1-201ENST00000606057 376 ntBASIC3.57□□□□□ -1.84
SKA1Q96BD8 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.57□□□□□ -1.84
SKA1Q96BD8 AC108747.1-201ENST00000609508 535 ntBASIC3.57□□□□□ -1.84
SKA1Q96BD8 AC034102.8-201ENST00000615146 484 ntBASIC3.57□□□□□ -1.84
SKA1Q96BD8 AP003399.1-201ENST00000637534 361 ntBASIC3.57□□□□□ -1.84
SKA1Q96BD8 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.57□□□□□ -1.84
SKA1Q96BD8 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.56□□□□□ -1.84
SKA1Q96BD8 MTND5P7-201ENST00000413558 1798 ntBASIC3.56□□□□□ -1.84
SKA1Q96BD8 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.56□□□□□ -1.84
SKA1Q96BD8 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SKA1Q96BD8 AC007823.1-201ENST00000569932 1566 ntBASIC3.56□□□□□ -1.84
SKA1Q96BD8 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
SKA1Q96BD8 RNU6-1167P-201ENST00000363227 94 ntBASIC3.56□□□□□ -1.84
SKA1Q96BD8 MIR888-201ENST00000401186 77 ntBASIC3.56□□□□□ -1.84
SKA1Q96BD8 FCF1P10-201ENST00000407590 479 ntBASIC3.56□□□□□ -1.84
SKA1Q96BD8 ZNF90P2-204ENST00000419323 1075 ntBASIC3.56□□□□□ -1.84
SKA1Q96BD8 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.56□□□□□ -1.84
SKA1Q96BD8 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.56□□□□□ -1.84
SKA1Q96BD8 RBMY2UP-201ENST00000453474 324 ntBASIC3.56□□□□□ -1.84
SKA1Q96BD8 SSXP1-201ENST00000453640 473 ntBASIC3.56□□□□□ -1.84
SKA1Q96BD8 RN7SL442P-201ENST00000473804 320 ntBASIC3.56□□□□□ -1.84
SKA1Q96BD8 AC021205.2-201ENST00000480069 347 ntBASIC3.56□□□□□ -1.84
SKA1Q96BD8 AC093663.1-201ENST00000497190 394 ntBASIC3.56□□□□□ -1.84
SKA1Q96BD8 AC098862.1-201ENST00000504991 413 ntBASIC3.56□□□□□ -1.84
SKA1Q96BD8 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.56□□□□□ -1.84
SKA1Q96BD8 RNU6-759P-201ENST00000516740 103 ntBASIC3.56□□□□□ -1.84
SKA1Q96BD8 RNU6-579P-201ENST00000516879 102 ntBASIC3.56□□□□□ -1.84
SKA1Q96BD8 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
SKA1Q96BD8 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.56□□□□□ -1.84
SKA1Q96BD8 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.56□□□□□ -1.84
SKA1Q96BD8 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.56□□□□□ -1.84
SKA1Q96BD8 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.56□□□□□ -1.84
SKA1Q96BD8 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.56□□□□□ -1.84
SKA1Q96BD8 RPL23AP78-201ENST00000599928 470 ntBASIC3.56□□□□□ -1.84
SKA1Q96BD8 WISP1-OT1-201ENST00000602893 642 ntBASIC3.56□□□□□ -1.84
SKA1Q96BD8 AL670379.6-201ENST00000603753 252 ntBASIC3.56□□□□□ -1.84
SKA1Q96BD8 AL670379.11-201ENST00000604059 253 ntBASIC3.56□□□□□ -1.84
SKA1Q96BD8 AC008162.1-201ENST00000604718 254 ntBASIC3.56□□□□□ -1.84
SKA1Q96BD8 AL670379.1-201ENST00000604752 252 ntBASIC3.56□□□□□ -1.84
SKA1Q96BD8 AL670379.5-201ENST00000605253 252 ntBASIC3.56□□□□□ -1.84
SKA1Q96BD8 AL670379.12-201ENST00000605291 253 ntBASIC3.56□□□□□ -1.84
SKA1Q96BD8 AL670379.8-201ENST00000605353 252 ntBASIC3.56□□□□□ -1.84
SKA1Q96BD8 AL670379.7-201ENST00000605823 252 ntBASIC3.56□□□□□ -1.84
SKA1Q96BD8 AC027807.2-201ENST00000616099 408 ntBASIC3.56□□□□□ -1.84
SKA1Q96BD8 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms