Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AL513331.1-201ENST00000411908 397 ntBASIC2.94□□□□□ -1.94
RFT1Q96AA3 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.94□□□□□ -1.94
RFT1Q96AA3 RPL21P24-201ENST00000413752 448 ntBASIC2.94□□□□□ -1.94
RFT1Q96AA3 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.94□□□□□ -1.94
RFT1Q96AA3 AC006366.1-201ENST00000422002 759 ntBASIC2.94□□□□□ -1.94
RFT1Q96AA3 AC244035.1-201ENST00000430042 390 ntBASIC2.94□□□□□ -1.94
RFT1Q96AA3 AL445584.1-201ENST00000431451 330 ntBASIC2.94□□□□□ -1.94
RFT1Q96AA3 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.94□□□□□ -1.94
RFT1Q96AA3 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.94□□□□□ -1.94
RFT1Q96AA3 AC129850.1-201ENST00000436203 508 ntBASIC2.94□□□□□ -1.94
RFT1Q96AA3 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.94□□□□□ -1.94
RFT1Q96AA3 ATP5C1P1-201ENST00000441945 895 ntBASIC2.94□□□□□ -1.94
RFT1Q96AA3 ZNF114P1-201ENST00000453500 292 ntBASIC2.94□□□□□ -1.94
RFT1Q96AA3 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.94□□□□□ -1.94
RFT1Q96AA3 AC108059.3-201ENST00000456388 214 ntBASIC2.94□□□□□ -1.94
RFT1Q96AA3 RNU6-420P-201ENST00000458780 107 ntBASIC2.94□□□□□ -1.94
RFT1Q96AA3 AC104472.2-201ENST00000469035 601 ntBASIC2.94□□□□□ -1.94
RFT1Q96AA3 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.94□□□□□ -1.94
RFT1Q96AA3 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.94□□□□□ -1.94
RFT1Q96AA3 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.94□□□□□ -1.94
RFT1Q96AA3 AC104619.4-201ENST00000510773 249 ntBASIC2.94□□□□□ -1.94
RFT1Q96AA3 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.94□□□□□ -1.94
RFT1Q96AA3 RNU6-1282P-201ENST00000516735 96 ntBASIC2.94□□□□□ -1.94
RFT1Q96AA3 AC106038.2-201ENST00000520706 568 ntBASIC2.94□□□□□ -1.94
RFT1Q96AA3 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.94□□□□□ -1.94
RFT1Q96AA3 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.94□□□□□ -1.94
RFT1Q96AA3 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.94□□□□□ -1.94
RFT1Q96AA3 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.94□□□□□ -1.94
RFT1Q96AA3 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC2.94□□□□□ -1.94
RFT1Q96AA3 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.94□□□□□ -1.94
RFT1Q96AA3 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC2.94□□□□□ -1.94
RFT1Q96AA3 ACTR3BP3-201ENST00000565577 979 ntBASIC2.94□□□□□ -1.94
RFT1Q96AA3 AGGF1P4-201ENST00000568249 801 ntBASIC2.94□□□□□ -1.94
RFT1Q96AA3 AC012435.1-202ENST00000568772 240 ntBASIC2.94□□□□□ -1.94
RFT1Q96AA3 MIR3609-201ENST00000582661 80 ntBASIC2.94□□□□□ -1.94
RFT1Q96AA3 MIR4293-201ENST00000584305 78 ntBASIC2.94□□□□□ -1.94
RFT1Q96AA3 HULC.1-201ENST00000612720 240 ntBASIC2.94□□□□□ -1.94
RFT1Q96AA3 AC104010.1-201ENST00000616889 150 ntBASIC2.94□□□□□ -1.94
RFT1Q96AA3 AC009159.1-201ENST00000618386 642 ntBASIC2.94□□□□□ -1.94
RFT1Q96AA3 AC068792.1-201ENST00000621354 417 ntBASIC2.94□□□□□ -1.94
RFT1Q96AA3 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.94□□□□□ -1.94
RFT1Q96AA3 AC093591.3-201ENST00000634516 308 ntBASIC2.94□□□□□ -1.94
RFT1Q96AA3 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.94□□□□□ -1.94
RFT1Q96AA3 ZNF833P-201ENST00000424938 1494 ntBASIC2.94□□□□□ -1.94
RFT1Q96AA3 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
RFT1Q96AA3 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.94□□□□□ -1.94
RFT1Q96AA3 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
RFT1Q96AA3 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
RFT1Q96AA3 PABPC1P9-201ENST00000426076 1612 ntBASIC2.93□□□□□ -1.94
RFT1Q96AA3 AL049641.1-201ENST00000441055 1948 ntBASIC2.93□□□□□ -1.94
RFT1Q96AA3 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RFT1Q96AA3 RNU6-623P-201ENST00000363143 105 ntBASIC2.93□□□□□ -1.94
RFT1Q96AA3 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.93□□□□□ -1.94
RFT1Q96AA3 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.93□□□□□ -1.94
RFT1Q96AA3 RNU6-809P-201ENST00000384461 107 ntBASIC2.93□□□□□ -1.94
RFT1Q96AA3 RN7SKP159-201ENST00000410657 292 ntBASIC2.93□□□□□ -1.94
RFT1Q96AA3 RNA5SP344-201ENST00000411081 104 ntBASIC2.93□□□□□ -1.94
RFT1Q96AA3 RN7SKP140-201ENST00000411196 284 ntBASIC2.93□□□□□ -1.94
RFT1Q96AA3 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.93□□□□□ -1.94
RFT1Q96AA3 SPA17P1-201ENST00000416656 452 ntBASIC2.93□□□□□ -1.94
RFT1Q96AA3 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.93□□□□□ -1.94
RFT1Q96AA3 AC091390.3-201ENST00000426478 338 ntBASIC2.93□□□□□ -1.94
RFT1Q96AA3 USP9YP14-201ENST00000430663 563 ntBASIC2.93□□□□□ -1.94
RFT1Q96AA3 USP12PX-201ENST00000432383 1057 ntBASIC2.93□□□□□ -1.94
RFT1Q96AA3 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.93□□□□□ -1.94
RFT1Q96AA3 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC2.93□□□□□ -1.94
RFT1Q96AA3 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC2.93□□□□□ -1.94
RFT1Q96AA3 NOTCH2P1-201ENST00000443481 624 ntBASIC2.93□□□□□ -1.94
RFT1Q96AA3 MTCO1P19-201ENST00000443487 500 ntBASIC2.93□□□□□ -1.94
RFT1Q96AA3 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.93□□□□□ -1.94
RFT1Q96AA3 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.93□□□□□ -1.94
RFT1Q96AA3 RN7SL75P-201ENST00000461926 281 ntBASIC2.93□□□□□ -1.94
RFT1Q96AA3 AC025518.1-201ENST00000479856 347 ntBASIC2.93□□□□□ -1.94
RFT1Q96AA3 AC010424.1-201ENST00000506336 297 ntBASIC2.93□□□□□ -1.94
RFT1Q96AA3 AL117351.2-201ENST00000513571 157 ntBASIC2.93□□□□□ -1.94
RFT1Q96AA3 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC2.93□□□□□ -1.94
RFT1Q96AA3 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.93□□□□□ -1.94
RFT1Q96AA3 AC116347.2-201ENST00000514912 523 ntBASIC2.93□□□□□ -1.94
RFT1Q96AA3 RN7SKP18-201ENST00000516005 275 ntBASIC2.93□□□□□ -1.94
RFT1Q96AA3 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.93□□□□□ -1.94
RFT1Q96AA3 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.93□□□□□ -1.94
RFT1Q96AA3 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.93□□□□□ -1.94
RFT1Q96AA3 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.93□□□□□ -1.94
RFT1Q96AA3 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RFT1Q96AA3 DEFB108A-201ENST00000530110 222 ntBASIC2.93□□□□□ -1.94
RFT1Q96AA3 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.93□□□□□ -1.94
RFT1Q96AA3 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.93□□□□□ -1.94
RFT1Q96AA3 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.93□□□□□ -1.94
RFT1Q96AA3 AC012414.6-201ENST00000568241 401 ntBASIC2.93□□□□□ -1.94
RFT1Q96AA3 ROCK1P1-201ENST00000573767 549 ntBASIC2.93□□□□□ -1.94
RFT1Q96AA3 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.93□□□□□ -1.94
RFT1Q96AA3 DEFB131E-202ENST00000602581 683 ntBASIC2.93□□□□□ -1.94
RFT1Q96AA3 AC092354.1-201ENST00000606057 376 ntBASIC2.93□□□□□ -1.94
RFT1Q96AA3 RN7SKP299-201ENST00000606679 301 ntBASIC2.93□□□□□ -1.94
RFT1Q96AA3 AL158063.1-201ENST00000615349 536 ntBASIC2.93□□□□□ -1.94
RFT1Q96AA3 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.93□□□□□ -1.94
RFT1Q96AA3 AC084035.1-201ENST00000634543 607 ntBASIC2.93□□□□□ -1.94
RFT1Q96AA3 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.93□□□□□ -1.94
RFT1Q96AA3 OR5H6-203ENST00000642105 978 ntBASIC2.93□□□□□ -1.94
RFT1Q96AA3 AC093831.2-201ENST00000624393 3427 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms