Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.2□□□□□ -1.74
HPS3Q969F9 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
HPS3Q969F9 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.2□□□□□ -1.74
HPS3Q969F9 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HPS3Q969F9 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HPS3Q969F9 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.2□□□□□ -1.74
HPS3Q969F9 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.19□□□□□ -1.74
HPS3Q969F9 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HPS3Q969F9 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.19□□□□□ -1.74
HPS3Q969F9 ZNF680P1-201ENST00000436625 1469 ntBASIC4.19□□□□□ -1.74
HPS3Q969F9 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HPS3Q969F9 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HPS3Q969F9 AL137003.2-201ENST00000606924 2538 ntBASIC4.19□□□□□ -1.74
HPS3Q969F9 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
HPS3Q969F9 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.19□□□□□ -1.74
HPS3Q969F9 Y_RNA.22-201ENST00000362492 102 ntBASIC4.19□□□□□ -1.74
HPS3Q969F9 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
HPS3Q969F9 HLFP1-201ENST00000402375 499 ntBASIC4.19□□□□□ -1.74
HPS3Q969F9 MIR1290-201ENST00000408735 78 ntBASIC4.19□□□□□ -1.74
HPS3Q969F9 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
HPS3Q969F9 MTND1P23-201ENST00000416931 372 ntBASIC4.19□□□□□ -1.74
HPS3Q969F9 HMGB3P20-201ENST00000417997 600 ntBASIC4.19□□□□□ -1.74
HPS3Q969F9 AL353193.1-201ENST00000421444 268 ntBASIC4.19□□□□□ -1.74
HPS3Q969F9 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.19□□□□□ -1.74
HPS3Q969F9 AL139247.1-201ENST00000422768 325 ntBASIC4.19□□□□□ -1.74
HPS3Q969F9 AC018630.2-202ENST00000422992 927 ntBASIC4.19□□□□□ -1.74
HPS3Q969F9 RPL7P54-201ENST00000438336 674 ntBASIC4.19□□□□□ -1.74
HPS3Q969F9 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.19□□□□□ -1.74
HPS3Q969F9 GAPDHP27-201ENST00000447427 1020 ntBASIC4.19□□□□□ -1.74
HPS3Q969F9 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.19□□□□□ -1.74
HPS3Q969F9 RPL21P104-201ENST00000464143 478 ntBASIC4.19□□□□□ -1.74
HPS3Q969F9 AP001086.1-201ENST00000494882 321 ntBASIC4.19□□□□□ -1.74
HPS3Q969F9 AC116562.3-201ENST00000506136 177 ntBASIC4.19□□□□□ -1.74
HPS3Q969F9 AC109927.2-201ENST00000506416 303 ntBASIC4.19□□□□□ -1.74
HPS3Q969F9 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
HPS3Q969F9 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.19□□□□□ -1.74
HPS3Q969F9 AC023632.4-201ENST00000517783 191 ntBASIC4.19□□□□□ -1.74
HPS3Q969F9 AC068587.5-201ENST00000528506 175 ntBASIC4.19□□□□□ -1.74
HPS3Q969F9 AC104383.1-201ENST00000530297 370 ntBASIC4.19□□□□□ -1.74
HPS3Q969F9 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.19□□□□□ -1.74
HPS3Q969F9 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC4.19□□□□□ -1.74
HPS3Q969F9 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.19□□□□□ -1.74
HPS3Q969F9 AC007687.1-201ENST00000602704 304 ntBASIC4.19□□□□□ -1.74
HPS3Q969F9 AC007621.1-201ENST00000604544 437 ntBASIC4.19□□□□□ -1.74
HPS3Q969F9 AP001596.2-201ENST00000608410 312 ntBASIC4.19□□□□□ -1.74
HPS3Q969F9 AC007014.2-201ENST00000615581 479 ntBASIC4.19□□□□□ -1.74
HPS3Q969F9 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.19□□□□□ -1.74
HPS3Q969F9 MIR3688-2-201ENST00000636963 87 ntBASIC4.19□□□□□ -1.74
HPS3Q969F9 MIR1321-201ENST00000637766 79 ntBASIC4.19□□□□□ -1.74
HPS3Q969F9 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
HPS3Q969F9 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.19□□□□□ -1.74
HPS3Q969F9 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
HPS3Q969F9 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HPS3Q969F9 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HPS3Q969F9 AC073073.2-201ENST00000609827 2578 ntBASIC4.18□□□□□ -1.74
HPS3Q969F9 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HPS3Q969F9 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HPS3Q969F9 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.18□□□□□ -1.74
HPS3Q969F9 RNU6-50P-201ENST00000362356 103 ntBASIC4.18□□□□□ -1.74
HPS3Q969F9 Y_RNA.367-201ENST00000365544 101 ntBASIC4.18□□□□□ -1.74
HPS3Q969F9 RNU4-48P-201ENST00000365559 182 ntBASIC4.18□□□□□ -1.74
HPS3Q969F9 RNU6-606P-201ENST00000384721 111 ntBASIC4.18□□□□□ -1.74
HPS3Q969F9 RNU6-780P-201ENST00000391030 104 ntBASIC4.18□□□□□ -1.74
HPS3Q969F9 HMGN2P8-201ENST00000391458 268 ntBASIC4.18□□□□□ -1.74
HPS3Q969F9 NDUFS5P1-201ENST00000405668 289 ntBASIC4.18□□□□□ -1.74
HPS3Q969F9 MIR1277-201ENST00000408536 78 ntBASIC4.18□□□□□ -1.74
HPS3Q969F9 RN7SKP285-201ENST00000410137 318 ntBASIC4.18□□□□□ -1.74
HPS3Q969F9 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.18□□□□□ -1.74
HPS3Q969F9 RPL27AP8-201ENST00000424277 446 ntBASIC4.18□□□□□ -1.74
HPS3Q969F9 MTCO1P20-201ENST00000425366 358 ntBASIC4.18□□□□□ -1.74
HPS3Q969F9 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.18□□□□□ -1.74
HPS3Q969F9 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.18□□□□□ -1.74
HPS3Q969F9 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.18□□□□□ -1.74
HPS3Q969F9 AL596276.1-201ENST00000434465 418 ntBASIC4.18□□□□□ -1.74
HPS3Q969F9 NDUFB1P1-201ENST00000435191 180 ntBASIC4.18□□□□□ -1.74
HPS3Q969F9 AL138799.3-201ENST00000438968 350 ntBASIC4.18□□□□□ -1.74
HPS3Q969F9 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.18□□□□□ -1.74
HPS3Q969F9 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.18□□□□□ -1.74
HPS3Q969F9 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC4.18□□□□□ -1.74
HPS3Q969F9 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.18□□□□□ -1.74
HPS3Q969F9 RPS20P20-201ENST00000460498 340 ntBASIC4.18□□□□□ -1.74
HPS3Q969F9 RPL36AP51-201ENST00000487216 318 ntBASIC4.18□□□□□ -1.74
HPS3Q969F9 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC4.18□□□□□ -1.74
HPS3Q969F9 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.18□□□□□ -1.74
HPS3Q969F9 MIR2114-201ENST00000516645 80 ntBASIC4.18□□□□□ -1.74
HPS3Q969F9 SUMO2P20-201ENST00000520803 283 ntBASIC4.18□□□□□ -1.74
HPS3Q969F9 AC007991.1-201ENST00000522680 631 ntBASIC4.18□□□□□ -1.74
HPS3Q969F9 AP001646.1-201ENST00000527936 915 ntBASIC4.18□□□□□ -1.74
HPS3Q969F9 AC008011.1-201ENST00000545989 227 ntBASIC4.18□□□□□ -1.74
HPS3Q969F9 RPS3AP4-201ENST00000555161 764 ntBASIC4.18□□□□□ -1.74
HPS3Q969F9 AC055876.1-202ENST00000567053 138 ntBASIC4.18□□□□□ -1.74
HPS3Q969F9 AC087499.8-201ENST00000578406 226 ntBASIC4.18□□□□□ -1.74
HPS3Q969F9 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.18□□□□□ -1.74
HPS3Q969F9 AC006504.3-201ENST00000586818 523 ntBASIC4.18□□□□□ -1.74
HPS3Q969F9 AC020914.4-201ENST00000597690 277 ntBASIC4.18□□□□□ -1.74
HPS3Q969F9 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.18□□□□□ -1.74
HPS3Q969F9 AL121992.2-201ENST00000606262 256 ntBASIC4.18□□□□□ -1.74
HPS3Q969F9 AL589994.2-201ENST00000621124 579 ntBASIC4.18□□□□□ -1.74
HPS3Q969F9 AL356321.1-201ENST00000621360 228 ntBASIC4.18□□□□□ -1.74
HPS3Q969F9 AL354798.1-201ENST00000622505 329 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 171.6 ms