Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 AC010975.3-201ENST00000618727 978 ntBASIC2□□□□□ -2.09
LMX1AQ8TE12 AL353997.5-201ENST00000618886 171 ntBASIC2□□□□□ -2.09
LMX1AQ8TE12 U2.6-201ENST00000619225 191 ntBASIC2□□□□□ -2.09
LMX1AQ8TE12 U2.5-201ENST00000619465 191 ntBASIC2□□□□□ -2.09
LMX1AQ8TE12 U2.10-201ENST00000620268 191 ntBASIC2□□□□□ -2.09
LMX1AQ8TE12 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2□□□□□ -2.09
LMX1AQ8TE12 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2□□□□□ -2.09
LMX1AQ8TE12 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
LMX1AQ8TE12 SDAD1P2-201ENST00000441308 2028 ntBASIC2□□□□□ -2.09
LMX1AQ8TE12 TPTE2P4-201ENST00000258589 1605 ntBASIC1.99□□□□□ -2.09
LMX1AQ8TE12 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
LMX1AQ8TE12 RNU6-492P-201ENST00000363035 104 ntBASIC1.99□□□□□ -2.09
LMX1AQ8TE12 RNU6-657P-201ENST00000383904 107 ntBASIC1.99□□□□□ -2.09
LMX1AQ8TE12 MIR583-201ENST00000384846 75 ntBASIC1.99□□□□□ -2.09
LMX1AQ8TE12 MCTS2P-201ENST00000394552 546 ntBASIC1.99□□□□□ -2.09
LMX1AQ8TE12 AL139156.1-201ENST00000412785 841 ntBASIC1.99□□□□□ -2.09
LMX1AQ8TE12 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.99□□□□□ -2.09
LMX1AQ8TE12 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.99□□□□□ -2.09
LMX1AQ8TE12 RPL7P37-201ENST00000425095 738 ntBASIC1.99□□□□□ -2.09
LMX1AQ8TE12 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.99□□□□□ -2.09
LMX1AQ8TE12 AC027124.2-201ENST00000428249 105 ntBASIC1.99□□□□□ -2.09
LMX1AQ8TE12 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.99□□□□□ -2.09
LMX1AQ8TE12 AC004263.1-201ENST00000479327 332 ntBASIC1.99□□□□□ -2.09
LMX1AQ8TE12 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.99□□□□□ -2.09
LMX1AQ8TE12 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC1.99□□□□□ -2.09
LMX1AQ8TE12 OR5BM1P-201ENST00000512021 366 ntBASIC1.99□□□□□ -2.09
LMX1AQ8TE12 TTC39CP1-201ENST00000512513 755 ntBASIC1.99□□□□□ -2.09
LMX1AQ8TE12 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.99□□□□□ -2.09
LMX1AQ8TE12 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC1.99□□□□□ -2.09
LMX1AQ8TE12 AP003355.1-201ENST00000518956 587 ntBASIC1.99□□□□□ -2.09
LMX1AQ8TE12 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.99□□□□□ -2.09
LMX1AQ8TE12 OR4R1P-201ENST00000529879 463 ntBASIC1.99□□□□□ -2.09
LMX1AQ8TE12 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC1.99□□□□□ -2.09
LMX1AQ8TE12 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.99□□□□□ -2.09
LMX1AQ8TE12 AL136520.1-202ENST00000555494 763 ntBASIC1.99□□□□□ -2.09
LMX1AQ8TE12 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.99□□□□□ -2.09
LMX1AQ8TE12 MIR3921-201ENST00000577308 85 ntBASIC1.99□□□□□ -2.09
LMX1AQ8TE12 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC1.99□□□□□ -2.09
LMX1AQ8TE12 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC1.99□□□□□ -2.09
LMX1AQ8TE12 AC011494.1-201ENST00000596454 237 ntBASIC1.99□□□□□ -2.09
LMX1AQ8TE12 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.99□□□□□ -2.09
LMX1AQ8TE12 AP001521.1-201ENST00000609150 300 ntBASIC1.99□□□□□ -2.09
LMX1AQ8TE12 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC1.99□□□□□ -2.09
LMX1AQ8TE12 AC013562.2-201ENST00000611632 603 ntBASIC1.99□□□□□ -2.09
LMX1AQ8TE12 AC034102.8-201ENST00000615146 484 ntBASIC1.99□□□□□ -2.09
LMX1AQ8TE12 AL161629.2-201ENST00000615347 275 ntBASIC1.99□□□□□ -2.09
LMX1AQ8TE12 AL356585.4-201ENST00000623078 1229 ntBASIC1.99□□□□□ -2.09
LMX1AQ8TE12 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.99□□□□□ -2.09
LMX1AQ8TE12 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.99□□□□□ -2.09
LMX1AQ8TE12 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
LMX1AQ8TE12 HMGB1P5-201ENST00000255320 642 ntBASIC1.98□□□□□ -2.09
LMX1AQ8TE12 DEFB108F-201ENST00000344638 222 ntBASIC1.98□□□□□ -2.09
LMX1AQ8TE12 SNORA80E-201ENST00000384744 137 ntBASIC1.98□□□□□ -2.09
LMX1AQ8TE12 MIR506-201ENST00000384998 124 ntBASIC1.98□□□□□ -2.09
LMX1AQ8TE12 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
LMX1AQ8TE12 TAS2R15P-201ENST00000390674 928 ntBASIC1.98□□□□□ -2.09
LMX1AQ8TE12 U8.13-201ENST00000390842 128 ntBASIC1.98□□□□□ -2.09
LMX1AQ8TE12 RNU6-882P-201ENST00000391025 103 ntBASIC1.98□□□□□ -2.09
LMX1AQ8TE12 RNU6-1197P-201ENST00000391183 107 ntBASIC1.98□□□□□ -2.09
LMX1AQ8TE12 AL355615.1-201ENST00000406187 641 ntBASIC1.98□□□□□ -2.09
LMX1AQ8TE12 MIR1290-201ENST00000408735 78 ntBASIC1.98□□□□□ -2.09
LMX1AQ8TE12 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC1.98□□□□□ -2.09
LMX1AQ8TE12 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.98□□□□□ -2.09
LMX1AQ8TE12 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.98□□□□□ -2.09
LMX1AQ8TE12 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.98□□□□□ -2.09
LMX1AQ8TE12 Z82190.1-201ENST00000454534 490 ntBASIC1.98□□□□□ -2.09
LMX1AQ8TE12 AC233279.1-201ENST00000455300 423 ntBASIC1.98□□□□□ -2.09
LMX1AQ8TE12 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC1.98□□□□□ -2.09
LMX1AQ8TE12 RPS15AP34-201ENST00000487776 387 ntBASIC1.98□□□□□ -2.09
LMX1AQ8TE12 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.98□□□□□ -2.09
LMX1AQ8TE12 RPL37P25-201ENST00000507308 276 ntBASIC1.98□□□□□ -2.09
LMX1AQ8TE12 AC006390.1-201ENST00000508068 283 ntBASIC1.98□□□□□ -2.09
LMX1AQ8TE12 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.98□□□□□ -2.09
LMX1AQ8TE12 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.98□□□□□ -2.09
LMX1AQ8TE12 MTCO3P27-201ENST00000514397 196 ntBASIC1.98□□□□□ -2.09
LMX1AQ8TE12 DEFB108D-201ENST00000527787 222 ntBASIC1.98□□□□□ -2.09
LMX1AQ8TE12 AC068339.2-201ENST00000534395 618 ntBASIC1.98□□□□□ -2.09
LMX1AQ8TE12 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.98□□□□□ -2.09
LMX1AQ8TE12 AC044913.1-201ENST00000557200 430 ntBASIC1.98□□□□□ -2.09
LMX1AQ8TE12 AC093510.2-201ENST00000562820 896 ntBASIC1.98□□□□□ -2.09
LMX1AQ8TE12 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
LMX1AQ8TE12 AMZ2P1-203ENST00000565833 850 ntBASIC1.98□□□□□ -2.09
LMX1AQ8TE12 MIR5194-201ENST00000582634 120 ntBASIC1.98□□□□□ -2.09
LMX1AQ8TE12 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC1.98□□□□□ -2.09
LMX1AQ8TE12 AL022099.1-201ENST00000604551 712 ntBASIC1.98□□□□□ -2.09
LMX1AQ8TE12 AL592148.2-201ENST00000612210 372 ntBASIC1.98□□□□□ -2.09
LMX1AQ8TE12 AC011890.2-201ENST00000613393 294 ntBASIC1.98□□□□□ -2.09
LMX1AQ8TE12 AC253576.2-201ENST00000618815 580 ntBASIC1.98□□□□□ -2.09
LMX1AQ8TE12 AC009812.4-201ENST00000569134 1805 ntBASIC1.98□□□□□ -2.09
LMX1AQ8TE12 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC1.98□□□□□ -2.09
LMX1AQ8TE12 MTND4P35-201ENST00000604257 1375 ntBASIC1.98□□□□□ -2.09
LMX1AQ8TE12 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.97□□□□□ -2.09
LMX1AQ8TE12 RNU5B-4P-201ENST00000363508 111 ntBASIC1.97□□□□□ -2.09
LMX1AQ8TE12 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
LMX1AQ8TE12 RNU6-198P-201ENST00000384258 104 ntBASIC1.97□□□□□ -2.09
LMX1AQ8TE12 RNU6-1300P-201ENST00000391046 108 ntBASIC1.97□□□□□ -2.09
LMX1AQ8TE12 AL513475.1-201ENST00000406602 315 ntBASIC1.97□□□□□ -2.09
LMX1AQ8TE12 RNU6-193P-201ENST00000410977 107 ntBASIC1.97□□□□□ -2.09
LMX1AQ8TE12 AL592310.1-201ENST00000414330 671 ntBASIC1.97□□□□□ -2.09
LMX1AQ8TE12 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 139.7 ms