Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SNIP1Q8TAD8 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
SNIP1Q8TAD8 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SNIP1Q8TAD8 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.4□□□□□ -1.54
SNIP1Q8TAD8 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SNIP1Q8TAD8 RPL23P2-201ENST00000320371 421 ntBASIC5.4□□□□□ -1.54
SNIP1Q8TAD8 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.54
SNIP1Q8TAD8 Y_RNA.121-201ENST00000363309 113 ntBASIC5.4□□□□□ -1.54
SNIP1Q8TAD8 RNU6-755P-201ENST00000364400 103 ntBASIC5.4□□□□□ -1.54
SNIP1Q8TAD8 RNU6-384P-201ENST00000364900 104 ntBASIC5.4□□□□□ -1.54
SNIP1Q8TAD8 RNU6-1175P-201ENST00000365200 107 ntBASIC5.4□□□□□ -1.54
SNIP1Q8TAD8 RNU6-339P-201ENST00000384310 107 ntBASIC5.4□□□□□ -1.54
SNIP1Q8TAD8 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
SNIP1Q8TAD8 SNORA40.19-201ENST00000390846 128 ntBASIC5.4□□□□□ -1.54
SNIP1Q8TAD8 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC5.4□□□□□ -1.54
SNIP1Q8TAD8 AL390729.2-201ENST00000416137 156 ntBASIC5.4□□□□□ -1.54
SNIP1Q8TAD8 WARS2P1-201ENST00000429678 537 ntBASIC5.4□□□□□ -1.54
SNIP1Q8TAD8 AL592045.1-201ENST00000429867 352 ntBASIC5.4□□□□□ -1.54
SNIP1Q8TAD8 CYCSP6-201ENST00000434498 302 ntBASIC5.4□□□□□ -1.54
SNIP1Q8TAD8 PSMD10P3-201ENST00000437000 448 ntBASIC5.4□□□□□ -1.54
SNIP1Q8TAD8 RPS27AP3-201ENST00000453803 454 ntBASIC5.4□□□□□ -1.54
SNIP1Q8TAD8 AC090602.1-201ENST00000469695 252 ntBASIC5.4□□□□□ -1.54
SNIP1Q8TAD8 RN7SL570P-201ENST00000484405 292 ntBASIC5.4□□□□□ -1.54
SNIP1Q8TAD8 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SNIP1Q8TAD8 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC5.4□□□□□ -1.54
SNIP1Q8TAD8 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.4□□□□□ -1.54
SNIP1Q8TAD8 Y_RNA.709-201ENST00000516952 92 ntBASIC5.4□□□□□ -1.54
SNIP1Q8TAD8 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.4□□□□□ -1.54
SNIP1Q8TAD8 AC010928.2-201ENST00000588017 287 ntBASIC5.4□□□□□ -1.54
SNIP1Q8TAD8 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC5.4□□□□□ -1.54
SNIP1Q8TAD8 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC5.4□□□□□ -1.54
SNIP1Q8TAD8 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.55
SNIP1Q8TAD8 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
SNIP1Q8TAD8 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SNIP1Q8TAD8 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.4□□□□□ -1.55
SNIP1Q8TAD8 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
SNIP1Q8TAD8 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SNIP1Q8TAD8 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
SNIP1Q8TAD8 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
SNIP1Q8TAD8 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.39□□□□□ -1.55
SNIP1Q8TAD8 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SNIP1Q8TAD8 AC026951.1-201ENST00000559530 2459 ntBASIC5.39□□□□□ -1.55
SNIP1Q8TAD8 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SNIP1Q8TAD8 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.39□□□□□ -1.55
SNIP1Q8TAD8 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.39□□□□□ -1.55
SNIP1Q8TAD8 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SNIP1Q8TAD8 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
SNIP1Q8TAD8 AC138907.8-201ENST00000623981 2256 ntBASIC5.39□□□□□ -1.55
SNIP1Q8TAD8 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.39□□□□□ -1.55
SNIP1Q8TAD8 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
SNIP1Q8TAD8 RNU4-9P-201ENST00000364951 139 ntBASIC5.39□□□□□ -1.55
SNIP1Q8TAD8 RNU6-20P-201ENST00000384106 107 ntBASIC5.39□□□□□ -1.55
SNIP1Q8TAD8 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.39□□□□□ -1.55
SNIP1Q8TAD8 TBCAP2-201ENST00000416175 326 ntBASIC5.39□□□□□ -1.55
SNIP1Q8TAD8 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.39□□□□□ -1.55
SNIP1Q8TAD8 PPP1R11P2-201ENST00000423543 382 ntBASIC5.39□□□□□ -1.55
SNIP1Q8TAD8 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SNIP1Q8TAD8 AL357134.1-201ENST00000445848 426 ntBASIC5.39□□□□□ -1.55
SNIP1Q8TAD8 RPL7L1P1-201ENST00000448259 785 ntBASIC5.39□□□□□ -1.55
SNIP1Q8TAD8 AC112187.1-201ENST00000455837 479 ntBASIC5.39□□□□□ -1.55
SNIP1Q8TAD8 AC126177.5-201ENST00000549599 178 ntBASIC5.39□□□□□ -1.55
SNIP1Q8TAD8 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.39□□□□□ -1.55
SNIP1Q8TAD8 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.39□□□□□ -1.55
SNIP1Q8TAD8 MIR3691-201ENST00000578066 90 ntBASIC5.39□□□□□ -1.55
SNIP1Q8TAD8 MIR1273C-201ENST00000578669 77 ntBASIC5.39□□□□□ -1.55
SNIP1Q8TAD8 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SNIP1Q8TAD8 AC090616.3-201ENST00000582184 217 ntBASIC5.39□□□□□ -1.55
SNIP1Q8TAD8 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC5.39□□□□□ -1.55
SNIP1Q8TAD8 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC5.39□□□□□ -1.55
SNIP1Q8TAD8 AL591926.4-201ENST00000616895 298 ntBASIC5.39□□□□□ -1.55
SNIP1Q8TAD8 RNA5SP439-201ENST00000617595 124 ntBASIC5.39□□□□□ -1.55
SNIP1Q8TAD8 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.39□□□□□ -1.55
SNIP1Q8TAD8 TUG1_4.1-201ENST00000619464 181 ntBASIC5.39□□□□□ -1.55
SNIP1Q8TAD8 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.39□□□□□ -1.55
SNIP1Q8TAD8 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
SNIP1Q8TAD8 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SNIP1Q8TAD8 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SNIP1Q8TAD8 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SNIP1Q8TAD8 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.39□□□□□ -1.55
SNIP1Q8TAD8 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SNIP1Q8TAD8 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SNIP1Q8TAD8 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.39□□□□□ -1.55
SNIP1Q8TAD8 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
SNIP1Q8TAD8 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SNIP1Q8TAD8 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SNIP1Q8TAD8 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SNIP1Q8TAD8 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.38□□□□□ -1.55
SNIP1Q8TAD8 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SNIP1Q8TAD8 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.38□□□□□ -1.55
SNIP1Q8TAD8 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SNIP1Q8TAD8 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SNIP1Q8TAD8 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
SNIP1Q8TAD8 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.38□□□□□ -1.55
SNIP1Q8TAD8 MIR133A2-201ENST00000347538 102 ntBASIC5.38□□□□□ -1.55
SNIP1Q8TAD8 RNA5SP361-201ENST00000362686 118 ntBASIC5.38□□□□□ -1.55
SNIP1Q8TAD8 AC019155.1-201ENST00000382242 574 ntBASIC5.38□□□□□ -1.55
SNIP1Q8TAD8 RNU1-77P-201ENST00000390868 162 ntBASIC5.38□□□□□ -1.55
SNIP1Q8TAD8 FAR2P2-201ENST00000413041 594 ntBASIC5.38□□□□□ -1.55
SNIP1Q8TAD8 AC090774.1-201ENST00000435925 246 ntBASIC5.38□□□□□ -1.55
SNIP1Q8TAD8 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 147.5 ms