Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CCDC71LQ8N9Z2 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
CCDC71LQ8N9Z2 RNU5F-7P-201ENST00000363696 115 ntBASIC2.48□□□□□ -2.01
CCDC71LQ8N9Z2 RNU6-501P-201ENST00000364072 100 ntBASIC2.48□□□□□ -2.01
CCDC71LQ8N9Z2 RNA5SP479-201ENST00000364858 117 ntBASIC2.48□□□□□ -2.01
CCDC71LQ8N9Z2 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.48□□□□□ -2.01
CCDC71LQ8N9Z2 U3.20-201ENST00000390909 217 ntBASIC2.48□□□□□ -2.01
CCDC71LQ8N9Z2 AL031577.2-201ENST00000404133 280 ntBASIC2.48□□□□□ -2.01
CCDC71LQ8N9Z2 AL139095.1-201ENST00000404326 391 ntBASIC2.48□□□□□ -2.01
CCDC71LQ8N9Z2 AL359704.1-201ENST00000411586 781 ntBASIC2.48□□□□□ -2.01
CCDC71LQ8N9Z2 TPMTP3-201ENST00000411928 735 ntBASIC2.48□□□□□ -2.01
CCDC71LQ8N9Z2 RPL7P8-201ENST00000411964 730 ntBASIC2.48□□□□□ -2.01
CCDC71LQ8N9Z2 RPS29P4-201ENST00000414733 161 ntBASIC2.48□□□□□ -2.01
CCDC71LQ8N9Z2 AC063979.1-201ENST00000415539 377 ntBASIC2.48□□□□□ -2.01
CCDC71LQ8N9Z2 SYF2P2-201ENST00000417620 583 ntBASIC2.48□□□□□ -2.01
CCDC71LQ8N9Z2 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC2.48□□□□□ -2.01
CCDC71LQ8N9Z2 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.48□□□□□ -2.01
CCDC71LQ8N9Z2 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.48□□□□□ -2.01
CCDC71LQ8N9Z2 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.48□□□□□ -2.01
CCDC71LQ8N9Z2 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.48□□□□□ -2.01
CCDC71LQ8N9Z2 UBE2D3P4-201ENST00000441973 436 ntBASIC2.48□□□□□ -2.01
CCDC71LQ8N9Z2 RPL7P36-201ENST00000444633 681 ntBASIC2.48□□□□□ -2.01
CCDC71LQ8N9Z2 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.48□□□□□ -2.01
CCDC71LQ8N9Z2 AC016696.1-201ENST00000446949 318 ntBASIC2.48□□□□□ -2.01
CCDC71LQ8N9Z2 TPT1P14-201ENST00000448018 505 ntBASIC2.48□□□□□ -2.01
CCDC71LQ8N9Z2 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.48□□□□□ -2.01
CCDC71LQ8N9Z2 KATNBL1P6-201ENST00000453433 915 ntBASIC2.48□□□□□ -2.01
CCDC71LQ8N9Z2 RPS15AP36-201ENST00000492022 382 ntBASIC2.48□□□□□ -2.01
CCDC71LQ8N9Z2 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.48□□□□□ -2.01
CCDC71LQ8N9Z2 AF131216.2-201ENST00000512316 564 ntBASIC2.48□□□□□ -2.01
CCDC71LQ8N9Z2 AC119751.5-201ENST00000514077 770 ntBASIC2.48□□□□□ -2.01
CCDC71LQ8N9Z2 RN7SKP272-201ENST00000516988 232 ntBASIC2.48□□□□□ -2.01
CCDC71LQ8N9Z2 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.48□□□□□ -2.01
CCDC71LQ8N9Z2 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.48□□□□□ -2.01
CCDC71LQ8N9Z2 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.48□□□□□ -2.01
CCDC71LQ8N9Z2 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.48□□□□□ -2.01
CCDC71LQ8N9Z2 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.48□□□□□ -2.01
CCDC71LQ8N9Z2 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
CCDC71LQ8N9Z2 PCMTD1P2-201ENST00000565017 355 ntBASIC2.48□□□□□ -2.01
CCDC71LQ8N9Z2 ROCK1P1-201ENST00000573767 549 ntBASIC2.48□□□□□ -2.01
CCDC71LQ8N9Z2 MIR3915-201ENST00000578518 97 ntBASIC2.48□□□□□ -2.01
CCDC71LQ8N9Z2 MIR4307-201ENST00000582802 84 ntBASIC2.48□□□□□ -2.01
CCDC71LQ8N9Z2 TPMTP1-201ENST00000592307 737 ntBASIC2.48□□□□□ -2.01
CCDC71LQ8N9Z2 AC023043.3-201ENST00000593113 385 ntBASIC2.48□□□□□ -2.01
CCDC71LQ8N9Z2 CKS1BP3-201ENST00000600888 237 ntBASIC2.48□□□□□ -2.01
CCDC71LQ8N9Z2 CLIC4P2-201ENST00000601934 717 ntBASIC2.48□□□□□ -2.01
CCDC71LQ8N9Z2 AL137843.1-201ENST00000605078 385 ntBASIC2.48□□□□□ -2.01
CCDC71LQ8N9Z2 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CCDC71LQ8N9Z2 AC091965.4-201ENST00000607691 587 ntBASIC2.48□□□□□ -2.01
CCDC71LQ8N9Z2 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
CCDC71LQ8N9Z2 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.48□□□□□ -2.01
CCDC71LQ8N9Z2 AC006378.2-201ENST00000623178 2476 ntBASIC2.48□□□□□ -2.01
CCDC71LQ8N9Z2 AL035425.3-201ENST00000564206 4996 ntBASIC2.48□□□□□ -2.01
CCDC71LQ8N9Z2 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CCDC71LQ8N9Z2 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
CCDC71LQ8N9Z2 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
CCDC71LQ8N9Z2 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CCDC71LQ8N9Z2 PABPC1P9-201ENST00000426076 1612 ntBASIC2.47□□□□□ -2.01
CCDC71LQ8N9Z2 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.47□□□□□ -2.01
CCDC71LQ8N9Z2 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.47□□□□□ -2.01
CCDC71LQ8N9Z2 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CCDC71LQ8N9Z2 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
CCDC71LQ8N9Z2 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
CCDC71LQ8N9Z2 Y_RNA.97-201ENST00000363094 102 ntBASIC2.47□□□□□ -2.01
CCDC71LQ8N9Z2 RNA5SP515-201ENST00000364570 118 ntBASIC2.47□□□□□ -2.01
CCDC71LQ8N9Z2 RNU6-432P-201ENST00000384196 109 ntBASIC2.47□□□□□ -2.01
CCDC71LQ8N9Z2 RNU5A-2P-201ENST00000384337 116 ntBASIC2.47□□□□□ -2.01
CCDC71LQ8N9Z2 MIR627-201ENST00000384979 97 ntBASIC2.47□□□□□ -2.01
CCDC71LQ8N9Z2 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
CCDC71LQ8N9Z2 SNORD67-201ENST00000390833 111 ntBASIC2.47□□□□□ -2.01
CCDC71LQ8N9Z2 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.47□□□□□ -2.01
CCDC71LQ8N9Z2 MTCYBP36-201ENST00000404146 440 ntBASIC2.47□□□□□ -2.01
CCDC71LQ8N9Z2 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.47□□□□□ -2.01
CCDC71LQ8N9Z2 RN7SKP27-201ENST00000410684 333 ntBASIC2.47□□□□□ -2.01
CCDC71LQ8N9Z2 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC71LQ8N9Z2 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC71LQ8N9Z2 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC71LQ8N9Z2 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.47□□□□□ -2.01
CCDC71LQ8N9Z2 AL512649.1-201ENST00000428997 581 ntBASIC2.47□□□□□ -2.01
CCDC71LQ8N9Z2 AL365184.2-201ENST00000431139 435 ntBASIC2.47□□□□□ -2.01
CCDC71LQ8N9Z2 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC71LQ8N9Z2 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC71LQ8N9Z2 AC007389.2-201ENST00000434630 306 ntBASIC2.47□□□□□ -2.01
CCDC71LQ8N9Z2 RPL37P21-201ENST00000435890 276 ntBASIC2.47□□□□□ -2.01
CCDC71LQ8N9Z2 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC71LQ8N9Z2 AL512286.1-201ENST00000439244 400 ntBASIC2.47□□□□□ -2.01
CCDC71LQ8N9Z2 MTND1P30-201ENST00000441241 901 ntBASIC2.47□□□□□ -2.01
CCDC71LQ8N9Z2 AC009237.8-201ENST00000445492 379 ntBASIC2.47□□□□□ -2.01
CCDC71LQ8N9Z2 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC71LQ8N9Z2 GSTA11P-201ENST00000452866 669 ntBASIC2.47□□□□□ -2.01
CCDC71LQ8N9Z2 AC010099.1-201ENST00000455434 375 ntBASIC2.47□□□□□ -2.01
CCDC71LQ8N9Z2 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC71LQ8N9Z2 MTCO1P42-201ENST00000457379 726 ntBASIC2.47□□□□□ -2.01
CCDC71LQ8N9Z2 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC71LQ8N9Z2 RN7SL863P-201ENST00000462370 296 ntBASIC2.47□□□□□ -2.01
CCDC71LQ8N9Z2 RPL21P10-201ENST00000463521 490 ntBASIC2.47□□□□□ -2.01
CCDC71LQ8N9Z2 AC109925.1-201ENST00000478069 331 ntBASIC2.47□□□□□ -2.01
CCDC71LQ8N9Z2 LARP1BP2-201ENST00000486594 519 ntBASIC2.47□□□□□ -2.01
CCDC71LQ8N9Z2 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC71LQ8N9Z2 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms