Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 MTCYBP20-201ENST00000524239 1129 ntBASIC2□□□□□ -2.09
ZIC4Q8N9L1 COX6CP5-201ENST00000527162 228 ntBASIC2□□□□□ -2.09
ZIC4Q8N9L1 AP000889.2-201ENST00000532684 490 ntBASIC2□□□□□ -2.09
ZIC4Q8N9L1 AP002770.2-201ENST00000543613 532 ntBASIC2□□□□□ -2.09
ZIC4Q8N9L1 GLYCAM1-201ENST00000546596 285 ntBASIC2□□□□□ -2.09
ZIC4Q8N9L1 AC007115.1-201ENST00000546853 234 ntBASIC2□□□□□ -2.09
ZIC4Q8N9L1 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2□□□□□ -2.09
ZIC4Q8N9L1 AC009163.5-201ENST00000575421 637 ntBASIC2□□□□□ -2.09
ZIC4Q8N9L1 AC090616.3-201ENST00000582184 217 ntBASIC2□□□□□ -2.09
ZIC4Q8N9L1 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2□□□□□ -2.09
ZIC4Q8N9L1 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2□□□□□ -2.09
ZIC4Q8N9L1 MTATP6P2-201ENST00000603319 678 ntBASIC2□□□□□ -2.09
ZIC4Q8N9L1 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2□□□□□ -2.09
ZIC4Q8N9L1 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
ZIC4Q8N9L1 AC120349.2-201ENST00000625002 298 ntBASIC2□□□□□ -2.09
ZIC4Q8N9L1 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC2□□□□□ -2.09
ZIC4Q8N9L1 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2□□□□□ -2.09
ZIC4Q8N9L1 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
ZIC4Q8N9L1 AC093536.2-201ENST00000565257 1406 ntBASIC2□□□□□ -2.09
ZIC4Q8N9L1 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.99□□□□□ -2.09
ZIC4Q8N9L1 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
ZIC4Q8N9L1 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
ZIC4Q8N9L1 RNU6-28P-201ENST00000362378 107 ntBASIC1.99□□□□□ -2.09
ZIC4Q8N9L1 RNU5B-4P-201ENST00000363508 111 ntBASIC1.99□□□□□ -2.09
ZIC4Q8N9L1 RNU6-461P-201ENST00000364195 107 ntBASIC1.99□□□□□ -2.09
ZIC4Q8N9L1 SNORA68.1-201ENST00000364537 132 ntBASIC1.99□□□□□ -2.09
ZIC4Q8N9L1 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.99□□□□□ -2.09
ZIC4Q8N9L1 MIR221-201ENST00000385135 110 ntBASIC1.99□□□□□ -2.09
ZIC4Q8N9L1 AL450338.1-201ENST00000407987 512 ntBASIC1.99□□□□□ -2.09
ZIC4Q8N9L1 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.99□□□□□ -2.09
ZIC4Q8N9L1 MTND1P23-201ENST00000416931 372 ntBASIC1.99□□□□□ -2.09
ZIC4Q8N9L1 PPP1R11P2-201ENST00000423543 382 ntBASIC1.99□□□□□ -2.09
ZIC4Q8N9L1 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
ZIC4Q8N9L1 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.99□□□□□ -2.09
ZIC4Q8N9L1 DDX3P2-201ENST00000446138 111 ntBASIC1.99□□□□□ -2.09
ZIC4Q8N9L1 AC079776.3-201ENST00000450665 370 ntBASIC1.99□□□□□ -2.09
ZIC4Q8N9L1 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC1.99□□□□□ -2.09
ZIC4Q8N9L1 AC010486.1-201ENST00000511793 424 ntBASIC1.99□□□□□ -2.09
ZIC4Q8N9L1 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
ZIC4Q8N9L1 SNORA31.18-201ENST00000517043 134 ntBASIC1.99□□□□□ -2.09
ZIC4Q8N9L1 IGLV3-17-201ENST00000519099 244 ntBASIC1.99□□□□□ -2.09
ZIC4Q8N9L1 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.99□□□□□ -2.09
ZIC4Q8N9L1 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.99□□□□□ -2.09
ZIC4Q8N9L1 MIR5708-201ENST00000579723 85 ntBASIC1.99□□□□□ -2.09
ZIC4Q8N9L1 SNORD53-201ENST00000579969 78 ntBASIC1.99□□□□□ -2.09
ZIC4Q8N9L1 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.99□□□□□ -2.09
ZIC4Q8N9L1 AC068313.1-201ENST00000604028 1008 ntBASIC1.99□□□□□ -2.09
ZIC4Q8N9L1 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.99□□□□□ -2.09
ZIC4Q8N9L1 AC093838.1-201ENST00000613014 469 ntBASIC1.99□□□□□ -2.09
ZIC4Q8N9L1 AC243773.3-201ENST00000613270 256 ntBASIC1.99□□□□□ -2.09
ZIC4Q8N9L1 AL590099.1-201ENST00000615276 138 ntBASIC1.99□□□□□ -2.09
ZIC4Q8N9L1 AC253576.2-201ENST00000618815 580 ntBASIC1.99□□□□□ -2.09
ZIC4Q8N9L1 AC068880.4-201ENST00000623082 495 ntBASIC1.99□□□□□ -2.09
ZIC4Q8N9L1 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.99□□□□□ -2.09
ZIC4Q8N9L1 CDR1-202ENST00000625883 1485 ntBASIC1.99□□□□□ -2.09
ZIC4Q8N9L1 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
ZIC4Q8N9L1 PABPC1P9-201ENST00000426076 1612 ntBASIC1.99□□□□□ -2.09
ZIC4Q8N9L1 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
ZIC4Q8N9L1 RNU6-741P-201ENST00000383889 107 ntBASIC1.98□□□□□ -2.09
ZIC4Q8N9L1 BTF3P7-201ENST00000407097 488 ntBASIC1.98□□□□□ -2.09
ZIC4Q8N9L1 AC007064.1-201ENST00000412238 351 ntBASIC1.98□□□□□ -2.09
ZIC4Q8N9L1 RPS7P9-201ENST00000414704 586 ntBASIC1.98□□□□□ -2.09
ZIC4Q8N9L1 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
ZIC4Q8N9L1 AC008850.1-201ENST00000427546 362 ntBASIC1.98□□□□□ -2.09
ZIC4Q8N9L1 GTF2IP20-201ENST00000431663 360 ntBASIC1.98□□□□□ -2.09
ZIC4Q8N9L1 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.98□□□□□ -2.09
ZIC4Q8N9L1 MTCYBP45-201ENST00000435243 565 ntBASIC1.98□□□□□ -2.09
ZIC4Q8N9L1 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC1.98□□□□□ -2.09
ZIC4Q8N9L1 AL445687.1-201ENST00000439946 251 ntBASIC1.98□□□□□ -2.09
ZIC4Q8N9L1 Z82210.1-201ENST00000440037 231 ntBASIC1.98□□□□□ -2.09
ZIC4Q8N9L1 AL049734.2-201ENST00000441066 616 ntBASIC1.98□□□□□ -2.09
ZIC4Q8N9L1 AC135721.1-201ENST00000497954 479 ntBASIC1.98□□□□□ -2.09
ZIC4Q8N9L1 MTCYBP17-201ENST00000503579 789 ntBASIC1.98□□□□□ -2.09
ZIC4Q8N9L1 AC008413.1-201ENST00000511864 177 ntBASIC1.98□□□□□ -2.09
ZIC4Q8N9L1 RNA5SP291-201ENST00000517222 105 ntBASIC1.98□□□□□ -2.09
ZIC4Q8N9L1 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC1.98□□□□□ -2.09
ZIC4Q8N9L1 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.98□□□□□ -2.09
ZIC4Q8N9L1 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
ZIC4Q8N9L1 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC1.98□□□□□ -2.09
ZIC4Q8N9L1 AP000889.1-201ENST00000530968 660 ntBASIC1.98□□□□□ -2.09
ZIC4Q8N9L1 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC1.98□□□□□ -2.09
ZIC4Q8N9L1 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.98□□□□□ -2.09
ZIC4Q8N9L1 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.98□□□□□ -2.09
ZIC4Q8N9L1 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.98□□□□□ -2.09
ZIC4Q8N9L1 MIR4513-201ENST00000581077 86 ntBASIC1.98□□□□□ -2.09
ZIC4Q8N9L1 AL158211.4-201ENST00000606988 584 ntBASIC1.98□□□□□ -2.09
ZIC4Q8N9L1 AL590808.1-201ENST00000618696 141 ntBASIC1.98□□□□□ -2.09
ZIC4Q8N9L1 AC009831.4-201ENST00000620744 325 ntBASIC1.98□□□□□ -2.09
ZIC4Q8N9L1 CCT4P2-201ENST00000233836 1548 ntBASIC1.97□□□□□ -2.09
ZIC4Q8N9L1 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
ZIC4Q8N9L1 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
ZIC4Q8N9L1 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
ZIC4Q8N9L1 TAS2R15P-201ENST00000390674 928 ntBASIC1.97□□□□□ -2.09
ZIC4Q8N9L1 U3.20-201ENST00000390909 217 ntBASIC1.97□□□□□ -2.09
ZIC4Q8N9L1 AL445529.1-201ENST00000398713 389 ntBASIC1.97□□□□□ -2.09
ZIC4Q8N9L1 AL603865.2-201ENST00000401679 213 ntBASIC1.97□□□□□ -2.09
ZIC4Q8N9L1 DHFRP6-201ENST00000401776 268 ntBASIC1.97□□□□□ -2.09
ZIC4Q8N9L1 SNORA3.2-201ENST00000408221 125 ntBASIC1.97□□□□□ -2.09
ZIC4Q8N9L1 AF274854.1-201ENST00000413236 615 ntBASIC1.97□□□□□ -2.09
ZIC4Q8N9L1 USP9YP22-201ENST00000438971 294 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms