Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CPSF7Q8N684 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.24□□□□□ -1.89
CPSF7Q8N684 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.24□□□□□ -1.89
CPSF7Q8N684 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.24□□□□□ -1.89
CPSF7Q8N684 MTND6P13-201ENST00000443510 523 ntBASIC3.24□□□□□ -1.89
CPSF7Q8N684 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.24□□□□□ -1.89
CPSF7Q8N684 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.24□□□□□ -1.89
CPSF7Q8N684 Z99127.3-201ENST00000448158 395 ntBASIC3.24□□□□□ -1.89
CPSF7Q8N684 RNU7-59P-201ENST00000459101 61 ntBASIC3.24□□□□□ -1.89
CPSF7Q8N684 AC146507.2-201ENST00000460608 476 ntBASIC3.24□□□□□ -1.89
CPSF7Q8N684 AC008155.2-201ENST00000464337 397 ntBASIC3.24□□□□□ -1.89
CPSF7Q8N684 MTND1P3-201ENST00000484956 952 ntBASIC3.24□□□□□ -1.89
CPSF7Q8N684 AC006483.1-201ENST00000487308 313 ntBASIC3.24□□□□□ -1.89
CPSF7Q8N684 AC082651.2-201ENST00000496833 166 ntBASIC3.24□□□□□ -1.89
CPSF7Q8N684 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.24□□□□□ -1.89
CPSF7Q8N684 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.24□□□□□ -1.89
CPSF7Q8N684 RNA5SP385-201ENST00000515947 110 ntBASIC3.24□□□□□ -1.89
CPSF7Q8N684 RNA5SP217-201ENST00000515959 91 ntBASIC3.24□□□□□ -1.89
CPSF7Q8N684 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.24□□□□□ -1.89
CPSF7Q8N684 AP002963.1-201ENST00000530590 184 ntBASIC3.24□□□□□ -1.89
CPSF7Q8N684 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.24□□□□□ -1.89
CPSF7Q8N684 AL133153.1-201ENST00000557756 303 ntBASIC3.24□□□□□ -1.89
CPSF7Q8N684 MIR3690-201ENST00000580266 75 ntBASIC3.24□□□□□ -1.89
CPSF7Q8N684 MIR3146-201ENST00000580367 79 ntBASIC3.24□□□□□ -1.89
CPSF7Q8N684 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.24□□□□□ -1.89
CPSF7Q8N684 AC006557.5-201ENST00000603126 811 ntBASIC3.24□□□□□ -1.89
CPSF7Q8N684 AC005000.2-201ENST00000605468 310 ntBASIC3.24□□□□□ -1.89
CPSF7Q8N684 AC103591.3-201ENST00000608684 209 ntBASIC3.24□□□□□ -1.89
CPSF7Q8N684 AC004067.1-201ENST00000608733 700 ntBASIC3.24□□□□□ -1.89
CPSF7Q8N684 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CPSF7Q8N684 AP001506.1-201ENST00000615444 211 ntBASIC3.24□□□□□ -1.89
CPSF7Q8N684 AC138932.5-201ENST00000617759 563 ntBASIC3.24□□□□□ -1.89
CPSF7Q8N684 SNORD39.4-201ENST00000620099 78 ntBASIC3.24□□□□□ -1.89
CPSF7Q8N684 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
CPSF7Q8N684 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CPSF7Q8N684 MTND5P7-201ENST00000413558 1798 ntBASIC3.24□□□□□ -1.89
CPSF7Q8N684 DDX10P1-201ENST00000448545 1933 ntBASIC3.24□□□□□ -1.89
CPSF7Q8N684 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CPSF7Q8N684 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.23□□□□□ -1.89
CPSF7Q8N684 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.23□□□□□ -1.89
CPSF7Q8N684 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.23□□□□□ -1.89
CPSF7Q8N684 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.23□□□□□ -1.89
CPSF7Q8N684 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.23□□□□□ -1.89
CPSF7Q8N684 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
CPSF7Q8N684 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.23□□□□□ -1.89
CPSF7Q8N684 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.23□□□□□ -1.89
CPSF7Q8N684 RNU6-623P-201ENST00000363143 105 ntBASIC3.23□□□□□ -1.89
CPSF7Q8N684 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.23□□□□□ -1.89
CPSF7Q8N684 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
CPSF7Q8N684 RNU6-348P-201ENST00000384386 107 ntBASIC3.23□□□□□ -1.89
CPSF7Q8N684 Y_RNA.559-201ENST00000384686 107 ntBASIC3.23□□□□□ -1.89
CPSF7Q8N684 RNU6-278P-201ENST00000390945 109 ntBASIC3.23□□□□□ -1.89
CPSF7Q8N684 DEFB108C-201ENST00000400154 252 ntBASIC3.23□□□□□ -1.89
CPSF7Q8N684 AC007899.1-201ENST00000412776 775 ntBASIC3.23□□□□□ -1.89
CPSF7Q8N684 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.23□□□□□ -1.89
CPSF7Q8N684 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.23□□□□□ -1.89
CPSF7Q8N684 MTATP6P4-201ENST00000427725 675 ntBASIC3.23□□□□□ -1.89
CPSF7Q8N684 AL353705.1-201ENST00000433468 480 ntBASIC3.23□□□□□ -1.89
CPSF7Q8N684 TIMM9P1-201ENST00000436122 256 ntBASIC3.23□□□□□ -1.89
CPSF7Q8N684 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.23□□□□□ -1.89
CPSF7Q8N684 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.23□□□□□ -1.89
CPSF7Q8N684 AC108059.3-201ENST00000456388 214 ntBASIC3.23□□□□□ -1.89
CPSF7Q8N684 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.23□□□□□ -1.89
CPSF7Q8N684 VN1R17P-201ENST00000472048 1090 ntBASIC3.23□□□□□ -1.89
CPSF7Q8N684 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.23□□□□□ -1.89
CPSF7Q8N684 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.23□□□□□ -1.89
CPSF7Q8N684 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.23□□□□□ -1.89
CPSF7Q8N684 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CPSF7Q8N684 MTCO3P7-201ENST00000510008 774 ntBASIC3.23□□□□□ -1.89
CPSF7Q8N684 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CPSF7Q8N684 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.23□□□□□ -1.89
CPSF7Q8N684 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.23□□□□□ -1.89
CPSF7Q8N684 AC005832.2-201ENST00000538921 1430 ntBASIC3.23□□□□□ -1.89
CPSF7Q8N684 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.23□□□□□ -1.89
CPSF7Q8N684 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.23□□□□□ -1.89
CPSF7Q8N684 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.23□□□□□ -1.89
CPSF7Q8N684 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.23□□□□□ -1.89
CPSF7Q8N684 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.23□□□□□ -1.89
CPSF7Q8N684 MIR3118-1-201ENST00000581787 76 ntBASIC3.23□□□□□ -1.89
CPSF7Q8N684 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.23□□□□□ -1.89
CPSF7Q8N684 KC877982.1-201ENST00000602313 470 ntBASIC3.23□□□□□ -1.89
CPSF7Q8N684 AC015871.2-201ENST00000603605 948 ntBASIC3.23□□□□□ -1.89
CPSF7Q8N684 AC006566.1-201ENST00000608943 513 ntBASIC3.23□□□□□ -1.89
CPSF7Q8N684 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.23□□□□□ -1.89
CPSF7Q8N684 AC006023.2-201ENST00000609916 167 ntBASIC3.23□□□□□ -1.89
CPSF7Q8N684 BX664608.1-201ENST00000610519 487 ntBASIC3.23□□□□□ -1.89
CPSF7Q8N684 HULC.1-201ENST00000612720 240 ntBASIC3.23□□□□□ -1.89
CPSF7Q8N684 AC093838.1-201ENST00000613014 469 ntBASIC3.23□□□□□ -1.89
CPSF7Q8N684 AC100793.4-201ENST00000613683 429 ntBASIC3.23□□□□□ -1.89
CPSF7Q8N684 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
CPSF7Q8N684 AC091953.2-201ENST00000623979 160 ntBASIC3.23□□□□□ -1.89
CPSF7Q8N684 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.23□□□□□ -1.89
CPSF7Q8N684 MIR3651-201ENST00000630427 90 ntBASIC3.23□□□□□ -1.89
CPSF7Q8N684 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CPSF7Q8N684 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
CPSF7Q8N684 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
CPSF7Q8N684 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
CPSF7Q8N684 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CPSF7Q8N684 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
CPSF7Q8N684 GNG5P1-201ENST00000255500 204 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms