Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.41□□□□□ -1.86
CLIP4Q8N3C7 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.41□□□□□ -1.86
CLIP4Q8N3C7 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.41□□□□□ -1.86
CLIP4Q8N3C7 CYCSP30-201ENST00000546447 172 ntBASIC3.41□□□□□ -1.86
CLIP4Q8N3C7 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.41□□□□□ -1.86
CLIP4Q8N3C7 PARP1P2-201ENST00000556806 195 ntBASIC3.41□□□□□ -1.86
CLIP4Q8N3C7 HMGB1P6-201ENST00000569046 646 ntBASIC3.41□□□□□ -1.86
CLIP4Q8N3C7 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.41□□□□□ -1.86
CLIP4Q8N3C7 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.41□□□□□ -1.86
CLIP4Q8N3C7 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.41□□□□□ -1.86
CLIP4Q8N3C7 KLKP1-201ENST00000595979 403 ntBASIC3.41□□□□□ -1.86
CLIP4Q8N3C7 AC004908.2-201ENST00000609090 574 ntBASIC3.41□□□□□ -1.86
CLIP4Q8N3C7 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.41□□□□□ -1.86
CLIP4Q8N3C7 AL354798.1-201ENST00000622505 329 ntBASIC3.41□□□□□ -1.86
CLIP4Q8N3C7 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CLIP4Q8N3C7 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLIP4Q8N3C7 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.41□□□□□ -1.86
CLIP4Q8N3C7 AL021368.2-201ENST00000606125 5352 ntBASIC3.41□□□□□ -1.86
CLIP4Q8N3C7 CKAP2P1-201ENST00000555477 2049 ntBASIC3.41□□□□□ -1.86
CLIP4Q8N3C7 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CLIP4Q8N3C7 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.41□□□□□ -1.86
CLIP4Q8N3C7 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CLIP4Q8N3C7 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
CLIP4Q8N3C7 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
CLIP4Q8N3C7 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
CLIP4Q8N3C7 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CLIP4Q8N3C7 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CLIP4Q8N3C7 RNY3P3-201ENST00000363816 102 ntBASIC3.4□□□□□ -1.87
CLIP4Q8N3C7 SNORA70.2-201ENST00000364506 135 ntBASIC3.4□□□□□ -1.87
CLIP4Q8N3C7 RNU6-283P-201ENST00000364788 107 ntBASIC3.4□□□□□ -1.87
CLIP4Q8N3C7 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CLIP4Q8N3C7 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CLIP4Q8N3C7 RNU6-837P-201ENST00000391056 108 ntBASIC3.4□□□□□ -1.87
CLIP4Q8N3C7 PPIAP31-201ENST00000405422 495 ntBASIC3.4□□□□□ -1.87
CLIP4Q8N3C7 AL356776.1-201ENST00000406574 447 ntBASIC3.4□□□□□ -1.87
CLIP4Q8N3C7 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.4□□□□□ -1.87
CLIP4Q8N3C7 MTCO3P12-201ENST00000416718 547 ntBASIC3.4□□□□□ -1.87
CLIP4Q8N3C7 RPL21P111-201ENST00000418453 477 ntBASIC3.4□□□□□ -1.87
CLIP4Q8N3C7 OR1AA1P-201ENST00000419597 916 ntBASIC3.4□□□□□ -1.87
CLIP4Q8N3C7 SNRPEP10-201ENST00000420249 274 ntBASIC3.4□□□□□ -1.87
CLIP4Q8N3C7 AC244098.2-201ENST00000422068 99 ntBASIC3.4□□□□□ -1.87
CLIP4Q8N3C7 AL139247.1-201ENST00000422768 325 ntBASIC3.4□□□□□ -1.87
CLIP4Q8N3C7 AC012498.1-201ENST00000424037 437 ntBASIC3.4□□□□□ -1.87
CLIP4Q8N3C7 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.4□□□□□ -1.87
CLIP4Q8N3C7 OR4K11P-201ENST00000431829 904 ntBASIC3.4□□□□□ -1.87
CLIP4Q8N3C7 AC098614.3-201ENST00000438957 440 ntBASIC3.4□□□□□ -1.87
CLIP4Q8N3C7 SEPT14P3-201ENST00000439401 183 ntBASIC3.4□□□□□ -1.87
CLIP4Q8N3C7 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.4□□□□□ -1.87
CLIP4Q8N3C7 USP9YP8-201ENST00000441913 500 ntBASIC3.4□□□□□ -1.87
CLIP4Q8N3C7 AL732372.2-207ENST00000445840 183 ntBASIC3.4□□□□□ -1.87
CLIP4Q8N3C7 AL354685.2-201ENST00000448218 1447 ntBASIC3.4□□□□□ -1.87
CLIP4Q8N3C7 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.4□□□□□ -1.87
CLIP4Q8N3C7 SEPT14P2-201ENST00000453405 183 ntBASIC3.4□□□□□ -1.87
CLIP4Q8N3C7 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.4□□□□□ -1.87
CLIP4Q8N3C7 RNU7-59P-201ENST00000459101 61 ntBASIC3.4□□□□□ -1.87
CLIP4Q8N3C7 RN7SL385P-201ENST00000468873 276 ntBASIC3.4□□□□□ -1.87
CLIP4Q8N3C7 AC091951.2-201ENST00000500762 203 ntBASIC3.4□□□□□ -1.87
CLIP4Q8N3C7 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.4□□□□□ -1.87
CLIP4Q8N3C7 SEPT14P4-201ENST00000513445 186 ntBASIC3.4□□□□□ -1.87
CLIP4Q8N3C7 RNA5SP401-201ENST00000515920 127 ntBASIC3.4□□□□□ -1.87
CLIP4Q8N3C7 RNU6-835P-201ENST00000516974 104 ntBASIC3.4□□□□□ -1.87
CLIP4Q8N3C7 RNU6-410P-201ENST00000517006 107 ntBASIC3.4□□□□□ -1.87
CLIP4Q8N3C7 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.4□□□□□ -1.87
CLIP4Q8N3C7 FO082796.1-201ENST00000523795 183 ntBASIC3.4□□□□□ -1.87
CLIP4Q8N3C7 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.4□□□□□ -1.87
CLIP4Q8N3C7 AP000857.1-201ENST00000532151 543 ntBASIC3.4□□□□□ -1.87
CLIP4Q8N3C7 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.4□□□□□ -1.87
CLIP4Q8N3C7 AC011602.1-201ENST00000546484 331 ntBASIC3.4□□□□□ -1.87
CLIP4Q8N3C7 CR383656.7-201ENST00000548164 174 ntBASIC3.4□□□□□ -1.87
CLIP4Q8N3C7 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.4□□□□□ -1.87
CLIP4Q8N3C7 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.4□□□□□ -1.87
CLIP4Q8N3C7 AC007224.1-201ENST00000564410 144 ntBASIC3.4□□□□□ -1.87
CLIP4Q8N3C7 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.4□□□□□ -1.87
CLIP4Q8N3C7 AC053481.4-201ENST00000583164 216 ntBASIC3.4□□□□□ -1.87
CLIP4Q8N3C7 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.4□□□□□ -1.87
CLIP4Q8N3C7 AC103710.2-201ENST00000609912 942 ntBASIC3.4□□□□□ -1.87
CLIP4Q8N3C7 AL731566.2-201ENST00000618971 317 ntBASIC3.4□□□□□ -1.87
CLIP4Q8N3C7 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.4□□□□□ -1.87
CLIP4Q8N3C7 AC099654.5-201ENST00000636479 350 ntBASIC3.4□□□□□ -1.87
CLIP4Q8N3C7 AC024614.3-201ENST00000637860 256 ntBASIC3.4□□□□□ -1.87
CLIP4Q8N3C7 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
CLIP4Q8N3C7 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.39□□□□□ -1.87
CLIP4Q8N3C7 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.39□□□□□ -1.87
CLIP4Q8N3C7 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CLIP4Q8N3C7 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLIP4Q8N3C7 CBX3P1-201ENST00000325243 554 ntBASIC3.39□□□□□ -1.87
CLIP4Q8N3C7 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.39□□□□□ -1.87
CLIP4Q8N3C7 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.39□□□□□ -1.87
CLIP4Q8N3C7 RNU6-1249P-201ENST00000363237 111 ntBASIC3.39□□□□□ -1.87
CLIP4Q8N3C7 RNU6-694P-201ENST00000364071 147 ntBASIC3.39□□□□□ -1.87
CLIP4Q8N3C7 RNU6-74P-201ENST00000384235 107 ntBASIC3.39□□□□□ -1.87
CLIP4Q8N3C7 RNU6-39P-201ENST00000384344 107 ntBASIC3.39□□□□□ -1.87
CLIP4Q8N3C7 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CLIP4Q8N3C7 AL591416.1-201ENST00000404015 867 ntBASIC3.39□□□□□ -1.87
CLIP4Q8N3C7 RNU6-628P-201ENST00000410675 107 ntBASIC3.39□□□□□ -1.87
CLIP4Q8N3C7 RNU6-516P-201ENST00000411381 104 ntBASIC3.39□□□□□ -1.87
CLIP4Q8N3C7 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.39□□□□□ -1.87
CLIP4Q8N3C7 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.39□□□□□ -1.87
CLIP4Q8N3C7 AL591419.1-201ENST00000427423 339 ntBASIC3.39□□□□□ -1.87
CLIP4Q8N3C7 AC091390.1-201ENST00000433904 331 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms