Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 Y_RNA.222-201ENST00000364264 102 ntBASIC5.36□□□□□ -1.55
SIX5Q8N196 SNORA70.2-201ENST00000364506 135 ntBASIC5.36□□□□□ -1.55
SIX5Q8N196 RNU6-1317P-201ENST00000364582 104 ntBASIC5.36□□□□□ -1.55
SIX5Q8N196 MIR521-1-201ENST00000384902 87 ntBASIC5.36□□□□□ -1.55
SIX5Q8N196 PPIAP9-201ENST00000403866 498 ntBASIC5.36□□□□□ -1.55
SIX5Q8N196 EI24P1-201ENST00000416584 867 ntBASIC5.36□□□□□ -1.55
SIX5Q8N196 AL513043.1-201ENST00000439124 535 ntBASIC5.36□□□□□ -1.55
SIX5Q8N196 AC112498.1-201ENST00000444401 332 ntBASIC5.36□□□□□ -1.55
SIX5Q8N196 RPS24P6-201ENST00000452670 400 ntBASIC5.36□□□□□ -1.55
SIX5Q8N196 AL356981.1-201ENST00000454879 684 ntBASIC5.36□□□□□ -1.55
SIX5Q8N196 SNORD127-201ENST00000458892 86 ntBASIC5.36□□□□□ -1.55
SIX5Q8N196 RPL9P9-202ENST00000466501 579 ntBASIC5.36□□□□□ -1.55
SIX5Q8N196 CREM-226ENST00000469949 721 ntTSL 3 BASIC5.36□□□□□ -1.55
SIX5Q8N196 AP000797.2-201ENST00000475768 606 ntBASIC5.36□□□□□ -1.55
SIX5Q8N196 HMGN1P11-201ENST00000508668 303 ntBASIC5.36□□□□□ -1.55
SIX5Q8N196 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC5.36□□□□□ -1.55
SIX5Q8N196 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC5.36□□□□□ -1.55
SIX5Q8N196 FAM60BP-201ENST00000578364 658 ntBASIC5.36□□□□□ -1.55
SIX5Q8N196 MIR4284-201ENST00000578924 81 ntBASIC5.36□□□□□ -1.55
SIX5Q8N196 AP000787.2-201ENST00000604432 568 ntBASIC5.36□□□□□ -1.55
SIX5Q8N196 RAC1P9-201ENST00000604990 392 ntBASIC5.36□□□□□ -1.55
SIX5Q8N196 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC5.36□□□□□ -1.55
SIX5Q8N196 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.36□□□□□ -1.55
SIX5Q8N196 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC5.36□□□□□ -1.55
SIX5Q8N196 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
SIX5Q8N196 AL592437.2-201ENST00000421655 2434 ntBASIC5.36□□□□□ -1.55
SIX5Q8N196 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.36□□□□□ -1.55
SIX5Q8N196 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.36□□□□□ -1.55
SIX5Q8N196 LINC01355-201ENST00000566551 5444 ntBASIC5.36□□□□□ -1.55
SIX5Q8N196 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
SIX5Q8N196 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SIX5Q8N196 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SIX5Q8N196 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
SIX5Q8N196 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.35□□□□□ -1.55
SIX5Q8N196 OR4F13P-202ENST00000560066 2054 ntBASIC5.35□□□□□ -1.55
SIX5Q8N196 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.35□□□□□ -1.55
SIX5Q8N196 Y_RNA.214-201ENST00000364201 112 ntBASIC5.35□□□□□ -1.55
SIX5Q8N196 SNORA20.1-201ENST00000364790 130 ntBASIC5.35□□□□□ -1.55
SIX5Q8N196 U8.8-201ENST00000365399 135 ntBASIC5.35□□□□□ -1.55
SIX5Q8N196 RNU1-136P-201ENST00000384181 164 ntBASIC5.35□□□□□ -1.55
SIX5Q8N196 Y_RNA.533-201ENST00000384596 114 ntBASIC5.35□□□□□ -1.55
SIX5Q8N196 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
SIX5Q8N196 RNU6-1025P-201ENST00000410629 104 ntBASIC5.35□□□□□ -1.55
SIX5Q8N196 AC079809.1-201ENST00000415468 276 ntBASIC5.35□□□□□ -1.55
SIX5Q8N196 ELOCP20-201ENST00000422460 345 ntBASIC5.35□□□□□ -1.55
SIX5Q8N196 MTCO1P39-201ENST00000426148 480 ntBASIC5.35□□□□□ -1.55
SIX5Q8N196 AC079780.1-201ENST00000428259 207 ntBASIC5.35□□□□□ -1.55
SIX5Q8N196 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.35□□□□□ -1.55
SIX5Q8N196 RPS23P7-201ENST00000466210 444 ntBASIC5.35□□□□□ -1.55
SIX5Q8N196 NDUFB4P9-201ENST00000511646 388 ntBASIC5.35□□□□□ -1.55
SIX5Q8N196 RNU6-397P-201ENST00000516226 104 ntBASIC5.35□□□□□ -1.55
SIX5Q8N196 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC5.35□□□□□ -1.55
SIX5Q8N196 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
SIX5Q8N196 SARNP-203ENST00000552080 726 ntTSL 2 BASIC5.35□□□□□ -1.55
SIX5Q8N196 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.35□□□□□ -1.55
SIX5Q8N196 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.35□□□□□ -1.55
SIX5Q8N196 RN7SL356P-201ENST00000582228 248 ntBASIC5.35□□□□□ -1.55
SIX5Q8N196 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC5.35□□□□□ -1.55
SIX5Q8N196 MIR4660-201ENST00000583549 74 ntBASIC5.35□□□□□ -1.55
SIX5Q8N196 AL020997.2-201ENST00000602607 184 ntBASIC5.35□□□□□ -1.55
SIX5Q8N196 AC004852.3-201ENST00000614131 326 ntBASIC5.35□□□□□ -1.55
SIX5Q8N196 AC141273.2-201ENST00000618989 130 ntBASIC5.35□□□□□ -1.55
SIX5Q8N196 AC006065.5-201ENST00000623427 349 ntBASIC5.35□□□□□ -1.55
SIX5Q8N196 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
SIX5Q8N196 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SIX5Q8N196 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SIX5Q8N196 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.35□□□□□ -1.55
SIX5Q8N196 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SIX5Q8N196 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
SIX5Q8N196 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SIX5Q8N196 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
SIX5Q8N196 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SIX5Q8N196 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SIX5Q8N196 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SIX5Q8N196 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SIX5Q8N196 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SIX5Q8N196 ZNF299P-201ENST00000406845 1804 ntBASIC5.34□□□□□ -1.55
SIX5Q8N196 NCAPGP1-201ENST00000505112 1814 ntBASIC5.34□□□□□ -1.55
SIX5Q8N196 AC100757.1-201ENST00000616872 1835 ntBASIC5.34□□□□□ -1.55
SIX5Q8N196 AC100778.3-201ENST00000580060 1750 ntBASIC5.34□□□□□ -1.55
SIX5Q8N196 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
SIX5Q8N196 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
SIX5Q8N196 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
SIX5Q8N196 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SIX5Q8N196 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SIX5Q8N196 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC5.34□□□□□ -1.55
SIX5Q8N196 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC5.34□□□□□ -1.55
SIX5Q8N196 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SIX5Q8N196 Y_RNA.19-201ENST00000362462 99 ntBASIC5.34□□□□□ -1.55
SIX5Q8N196 RNA5SP428-201ENST00000365129 132 ntBASIC5.34□□□□□ -1.55
SIX5Q8N196 RNU6-209P-201ENST00000384118 107 ntBASIC5.34□□□□□ -1.55
SIX5Q8N196 Y_RNA.483-201ENST00000384380 101 ntBASIC5.34□□□□□ -1.55
SIX5Q8N196 MIR514A1-201ENST00000385133 98 ntBASIC5.34□□□□□ -1.55
SIX5Q8N196 MT-TW-201ENST00000387382 68 ntBASIC5.34□□□□□ -1.55
SIX5Q8N196 MIR1182-201ENST00000408363 97 ntBASIC5.34□□□□□ -1.55
SIX5Q8N196 RNU2-38P-201ENST00000410856 79 ntBASIC5.34□□□□□ -1.55
SIX5Q8N196 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.34□□□□□ -1.55
SIX5Q8N196 AL096701.2-201ENST00000416920 238 ntBASIC5.34□□□□□ -1.55
SIX5Q8N196 AL158156.1-201ENST00000422509 473 ntBASIC5.34□□□□□ -1.55
SIX5Q8N196 AL132765.1-201ENST00000434165 553 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms