Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 RNU6-798P-201ENST00000516912 103 ntBASIC2.71□□□□□ -1.98
CCDC65Q8IXS2 RNU6-714P-201ENST00000516963 103 ntBASIC2.71□□□□□ -1.98
CCDC65Q8IXS2 RNA5SP471-201ENST00000516971 106 ntBASIC2.71□□□□□ -1.98
CCDC65Q8IXS2 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.71□□□□□ -1.98
CCDC65Q8IXS2 AP003497.1-201ENST00000528472 562 ntBASIC2.71□□□□□ -1.98
CCDC65Q8IXS2 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.71□□□□□ -1.98
CCDC65Q8IXS2 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.71□□□□□ -1.98
CCDC65Q8IXS2 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.71□□□□□ -1.98
CCDC65Q8IXS2 AL512347.1-201ENST00000566420 503 ntBASIC2.71□□□□□ -1.98
CCDC65Q8IXS2 AC090615.1-201ENST00000577519 154 ntBASIC2.71□□□□□ -1.98
CCDC65Q8IXS2 OR4K7P-201ENST00000580232 945 ntBASIC2.71□□□□□ -1.98
CCDC65Q8IXS2 AC090616.3-201ENST00000582184 217 ntBASIC2.71□□□□□ -1.98
CCDC65Q8IXS2 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.71□□□□□ -1.98
CCDC65Q8IXS2 AP001269.3-201ENST00000588718 329 ntBASIC2.71□□□□□ -1.98
CCDC65Q8IXS2 AP001429.1-201ENST00000602568 530 ntBASIC2.71□□□□□ -1.98
CCDC65Q8IXS2 AC021749.1-201ENST00000604322 607 ntBASIC2.71□□□□□ -1.98
CCDC65Q8IXS2 AP002826.1-201ENST00000608835 315 ntBASIC2.71□□□□□ -1.98
CCDC65Q8IXS2 AC131235.4-201ENST00000609288 620 ntBASIC2.71□□□□□ -1.98
CCDC65Q8IXS2 MIR6895-201ENST00000613497 78 ntBASIC2.71□□□□□ -1.98
CCDC65Q8IXS2 AC231657.1-201ENST00000624313 397 ntBASIC2.71□□□□□ -1.98
CCDC65Q8IXS2 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.71□□□□□ -1.98
CCDC65Q8IXS2 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.71□□□□□ -1.98
CCDC65Q8IXS2 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.71□□□□□ -1.98
CCDC65Q8IXS2 AL390862.1-201ENST00000635467 1469 ntBASIC2.71□□□□□ -1.98
CCDC65Q8IXS2 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CCDC65Q8IXS2 RPL27AP8-201ENST00000424277 446 ntBASIC2.7□□□□□ -1.98
CCDC65Q8IXS2 BX119904.4-201ENST00000424402 301 ntBASIC2.7□□□□□ -1.98
CCDC65Q8IXS2 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.7□□□□□ -1.98
CCDC65Q8IXS2 ATP5F1P1-201ENST00000433775 569 ntBASIC2.7□□□□□ -1.98
CCDC65Q8IXS2 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.7□□□□□ -1.98
CCDC65Q8IXS2 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.7□□□□□ -1.98
CCDC65Q8IXS2 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.7□□□□□ -1.98
CCDC65Q8IXS2 AL031313.1-201ENST00000448435 256 ntBASIC2.7□□□□□ -1.98
CCDC65Q8IXS2 RPS15AP34-201ENST00000487776 387 ntBASIC2.7□□□□□ -1.98
CCDC65Q8IXS2 HMGB3P3-201ENST00000510526 400 ntBASIC2.7□□□□□ -1.98
CCDC65Q8IXS2 RNU4-29P-201ENST00000515943 174 ntBASIC2.7□□□□□ -1.98
CCDC65Q8IXS2 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.7□□□□□ -1.98
CCDC65Q8IXS2 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.7□□□□□ -1.98
CCDC65Q8IXS2 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.7□□□□□ -1.98
CCDC65Q8IXS2 MTCYBP23-201ENST00000558717 1102 ntBASIC2.7□□□□□ -1.98
CCDC65Q8IXS2 MIR3921-201ENST00000577308 85 ntBASIC2.7□□□□□ -1.98
CCDC65Q8IXS2 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.7□□□□□ -1.98
CCDC65Q8IXS2 AL353997.4-201ENST00000586196 166 ntBASIC2.7□□□□□ -1.98
CCDC65Q8IXS2 AC068313.1-201ENST00000604028 1008 ntBASIC2.7□□□□□ -1.98
CCDC65Q8IXS2 AC007621.1-201ENST00000604544 437 ntBASIC2.7□□□□□ -1.98
CCDC65Q8IXS2 RNU4-5P-201ENST00000607255 135 ntBASIC2.7□□□□□ -1.98
CCDC65Q8IXS2 AL109620.1-201ENST00000618738 1197 ntBASIC2.7□□□□□ -1.98
CCDC65Q8IXS2 MIR6130-201ENST00000619419 109 ntBASIC2.7□□□□□ -1.98
CCDC65Q8IXS2 AC007998.5-201ENST00000622938 237 ntBASIC2.7□□□□□ -1.98
CCDC65Q8IXS2 AC027309.3-201ENST00000623419 351 ntBASIC2.7□□□□□ -1.98
CCDC65Q8IXS2 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.7□□□□□ -1.98
CCDC65Q8IXS2 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.7□□□□□ -1.98
CCDC65Q8IXS2 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.7□□□□□ -1.98
CCDC65Q8IXS2 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CCDC65Q8IXS2 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.7□□□□□ -1.98
CCDC65Q8IXS2 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
CCDC65Q8IXS2 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.7□□□□□ -1.98
CCDC65Q8IXS2 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.7□□□□□ -1.98
CCDC65Q8IXS2 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CCDC65Q8IXS2 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.69□□□□□ -1.98
CCDC65Q8IXS2 AC008568.2-201ENST00000623862 2313 ntBASIC2.69□□□□□ -1.98
CCDC65Q8IXS2 Y_RNA.311-201ENST00000365068 96 ntBASIC2.69□□□□□ -1.98
CCDC65Q8IXS2 U8.8-201ENST00000365399 135 ntBASIC2.69□□□□□ -1.98
CCDC65Q8IXS2 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.69□□□□□ -1.98
CCDC65Q8IXS2 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CCDC65Q8IXS2 SNORA36C-201ENST00000384289 132 ntBASIC2.69□□□□□ -1.98
CCDC65Q8IXS2 RNU6-1197P-201ENST00000391183 107 ntBASIC2.69□□□□□ -1.98
CCDC65Q8IXS2 RPS4XP8-201ENST00000402039 771 ntBASIC2.69□□□□□ -1.98
CCDC65Q8IXS2 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC65Q8IXS2 AL953862.1-201ENST00000423016 168 ntBASIC2.69□□□□□ -1.98
CCDC65Q8IXS2 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC65Q8IXS2 MTCO2P20-201ENST00000437339 673 ntBASIC2.69□□□□□ -1.98
CCDC65Q8IXS2 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.69□□□□□ -1.98
CCDC65Q8IXS2 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.69□□□□□ -1.98
CCDC65Q8IXS2 MTND1P31-201ENST00000449206 961 ntBASIC2.69□□□□□ -1.98
CCDC65Q8IXS2 RPL21P134-201ENST00000453468 483 ntBASIC2.69□□□□□ -1.98
CCDC65Q8IXS2 AC010099.1-201ENST00000455434 375 ntBASIC2.69□□□□□ -1.98
CCDC65Q8IXS2 AC005410.1-202ENST00000460347 485 ntBASIC2.69□□□□□ -1.98
CCDC65Q8IXS2 HSPE1P6-201ENST00000479457 291 ntBASIC2.69□□□□□ -1.98
CCDC65Q8IXS2 AL049873.1-201ENST00000480540 376 ntBASIC2.69□□□□□ -1.98
CCDC65Q8IXS2 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC65Q8IXS2 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC65Q8IXS2 AC113155.1-201ENST00000511141 769 ntBASIC2.69□□□□□ -1.98
CCDC65Q8IXS2 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC65Q8IXS2 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC65Q8IXS2 AC103783.1-201ENST00000520506 373 ntBASIC2.69□□□□□ -1.98
CCDC65Q8IXS2 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.69□□□□□ -1.98
CCDC65Q8IXS2 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.69□□□□□ -1.98
CCDC65Q8IXS2 AC011260.1-201ENST00000578420 472 ntBASIC2.69□□□□□ -1.98
CCDC65Q8IXS2 MIR3908-201ENST00000579798 126 ntBASIC2.69□□□□□ -1.98
CCDC65Q8IXS2 AL136363.1-201ENST00000605349 337 ntBASIC2.69□□□□□ -1.98
CCDC65Q8IXS2 AL157392.4-201ENST00000609756 345 ntBASIC2.69□□□□□ -1.98
CCDC65Q8IXS2 AC109809.1-201ENST00000619665 545 ntBASIC2.69□□□□□ -1.98
CCDC65Q8IXS2 AC011477.1-204ENST00000623416 1325 ntBASIC2.68□□□□□ -1.98
CCDC65Q8IXS2 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.68□□□□□ -1.98
CCDC65Q8IXS2 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CCDC65Q8IXS2 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
CCDC65Q8IXS2 RNU5E-8P-201ENST00000363502 116 ntBASIC2.68□□□□□ -1.98
CCDC65Q8IXS2 RNU6-270P-201ENST00000364131 105 ntBASIC2.68□□□□□ -1.98
CCDC65Q8IXS2 RNU6-359P-201ENST00000365466 108 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms