Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 RNA5SP509-201ENST00000364577 119 ntBASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 Y_RNA.473-201ENST00000384333 102 ntBASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 RNU6-310P-201ENST00000384655 107 ntBASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 AL139397.2-201ENST00000404529 772 ntBASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 AL445189.1-201ENST00000405722 338 ntBASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 HDGFP1-201ENST00000405943 252 ntBASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 AL583834.1-201ENST00000406943 343 ntBASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 RNU4-25P-201ENST00000410569 230 ntBASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 TMSB10P2-201ENST00000416049 131 ntBASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 AL732292.1-201ENST00000426692 226 ntBASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 AL137792.2-201ENST00000443484 235 ntBASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 ELOCP24-201ENST00000456370 334 ntBASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 RN7SL385P-201ENST00000468873 276 ntBASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 AC117503.1-201ENST00000472241 394 ntBASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 AC026979.1-201ENST00000492525 396 ntBASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 AC021146.2-201ENST00000504736 556 ntBASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 SMURF2P1-201ENST00000514992 481 ntBASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 RNU2-69P-201ENST00000516061 100 ntBASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 RNU6-1332P-201ENST00000516666 104 ntBASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 RN7SKP60-201ENST00000516985 239 ntBASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 OR4H12P-201ENST00000556269 907 ntBASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 AC067852.3-201ENST00000589177 561 ntBASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 BPIFA4P-203ENST00000603168 689 ntBASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 CYP2C61P-201ENST00000604072 290 ntBASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 MIR6128-201ENST00000615528 109 ntBASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 RMST_9.1-201ENST00000619945 193 ntBASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 MIR6810-201ENST00000622701 70 ntBASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 AC005086.4-201ENST00000623065 213 ntBASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM48Q8IWZ4 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRIM48Q8IWZ4 MTND5P16-201ENST00000460269 1703 ntBASIC4.35□□□□□ -1.71
TRIM48Q8IWZ4 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRIM48Q8IWZ4 MTND5P10-201ENST00000603719 1809 ntBASIC4.35□□□□□ -1.71
TRIM48Q8IWZ4 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRIM48Q8IWZ4 Y_RNA.28-201ENST00000362554 111 ntBASIC4.35□□□□□ -1.71
TRIM48Q8IWZ4 RNU6-562P-201ENST00000362731 107 ntBASIC4.35□□□□□ -1.71
TRIM48Q8IWZ4 Y_RNA.135-201ENST00000363439 95 ntBASIC4.35□□□□□ -1.71
TRIM48Q8IWZ4 Y_RNA.144-201ENST00000363521 113 ntBASIC4.35□□□□□ -1.71
TRIM48Q8IWZ4 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRIM48Q8IWZ4 RNU6-190P-201ENST00000384154 102 ntBASIC4.35□□□□□ -1.71
TRIM48Q8IWZ4 RNU6-14P-201ENST00000384630 106 ntBASIC4.35□□□□□ -1.71
TRIM48Q8IWZ4 AL356057.3-201ENST00000402607 340 ntBASIC4.35□□□□□ -1.71
TRIM48Q8IWZ4 Y_RNA.646-201ENST00000410980 101 ntBASIC4.35□□□□□ -1.71
TRIM48Q8IWZ4 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.35□□□□□ -1.71
TRIM48Q8IWZ4 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.35□□□□□ -1.71
TRIM48Q8IWZ4 RPL21P109-201ENST00000422213 475 ntBASIC4.35□□□□□ -1.71
TRIM48Q8IWZ4 PDSS1P1-201ENST00000422953 1114 ntBASIC4.35□□□□□ -1.71
TRIM48Q8IWZ4 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.35□□□□□ -1.71
TRIM48Q8IWZ4 AL590632.1-201ENST00000424289 371 ntBASIC4.35□□□□□ -1.71
TRIM48Q8IWZ4 AL669831.1-202ENST00000428504 417 ntBASIC4.35□□□□□ -1.71
TRIM48Q8IWZ4 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.35□□□□□ -1.71
TRIM48Q8IWZ4 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.35□□□□□ -1.71
TRIM48Q8IWZ4 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.35□□□□□ -1.71
TRIM48Q8IWZ4 IFNWP4-201ENST00000453148 294 ntBASIC4.35□□□□□ -1.71
TRIM48Q8IWZ4 RNU7-167P-201ENST00000459160 62 ntBASIC4.35□□□□□ -1.71
TRIM48Q8IWZ4 AC087884.1-201ENST00000469738 328 ntBASIC4.35□□□□□ -1.71
TRIM48Q8IWZ4 AC109327.1-201ENST00000471666 403 ntBASIC4.35□□□□□ -1.71
TRIM48Q8IWZ4 TRBV1-201ENST00000476502 284 ntBASIC4.35□□□□□ -1.71
TRIM48Q8IWZ4 RN7SL817P-201ENST00000480777 288 ntBASIC4.35□□□□□ -1.71
TRIM48Q8IWZ4 SNORA14.1-201ENST00000516113 141 ntBASIC4.35□□□□□ -1.71
TRIM48Q8IWZ4 RANP9-201ENST00000519957 271 ntBASIC4.35□□□□□ -1.71
TRIM48Q8IWZ4 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.35□□□□□ -1.71
TRIM48Q8IWZ4 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.35□□□□□ -1.71
TRIM48Q8IWZ4 AC063950.1-201ENST00000552036 308 ntBASIC4.35□□□□□ -1.71
TRIM48Q8IWZ4 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.35□□□□□ -1.71
TRIM48Q8IWZ4 MIR3941-201ENST00000582572 103 ntBASIC4.35□□□□□ -1.71
TRIM48Q8IWZ4 MIR4697-201ENST00000582977 78 ntBASIC4.35□□□□□ -1.71
TRIM48Q8IWZ4 XIAPP1-201ENST00000603162 600 ntBASIC4.35□□□□□ -1.71
TRIM48Q8IWZ4 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.35□□□□□ -1.71
TRIM48Q8IWZ4 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRIM48Q8IWZ4 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRIM48Q8IWZ4 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.35□□□□□ -1.71
TRIM48Q8IWZ4 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.35□□□□□ -1.71
TRIM48Q8IWZ4 AL669831.3-213ENST00000636676 183 ntBASIC4.35□□□□□ -1.71
TRIM48Q8IWZ4 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 150.2 ms