Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC245517.5-201ENST00000611529 162 ntBASIC2.53□□□□□ -2
NUDCD3Q8IVD9 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.53□□□□□ -2
NUDCD3Q8IVD9 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.53□□□□□ -2
NUDCD3Q8IVD9 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.53□□□□□ -2
NUDCD3Q8IVD9 AC092447.10-201ENST00000620607 1652 ntBASIC2.53□□□□□ -2
NUDCD3Q8IVD9 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.53□□□□□ -2
NUDCD3Q8IVD9 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.52□□□□□ -2.01
NUDCD3Q8IVD9 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
NUDCD3Q8IVD9 SNORA23-201ENST00000365128 182 ntBASIC2.52□□□□□ -2.01
NUDCD3Q8IVD9 SNORA70.4-201ENST00000365509 134 ntBASIC2.52□□□□□ -2.01
NUDCD3Q8IVD9 RNU1-138P-201ENST00000384093 164 ntBASIC2.52□□□□□ -2.01
NUDCD3Q8IVD9 RNU6-1035P-201ENST00000384477 107 ntBASIC2.52□□□□□ -2.01
NUDCD3Q8IVD9 NANOGP5-201ENST00000424456 877 ntBASIC2.52□□□□□ -2.01
NUDCD3Q8IVD9 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.52□□□□□ -2.01
NUDCD3Q8IVD9 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.52□□□□□ -2.01
NUDCD3Q8IVD9 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.52□□□□□ -2.01
NUDCD3Q8IVD9 AC092155.2-201ENST00000454675 477 ntBASIC2.52□□□□□ -2.01
NUDCD3Q8IVD9 UBE2V1P12-201ENST00000503954 474 ntBASIC2.52□□□□□ -2.01
NUDCD3Q8IVD9 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.52□□□□□ -2.01
NUDCD3Q8IVD9 MTATP6P9-201ENST00000515039 680 ntBASIC2.52□□□□□ -2.01
NUDCD3Q8IVD9 RNU6-840P-201ENST00000517275 65 ntBASIC2.52□□□□□ -2.01
NUDCD3Q8IVD9 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.52□□□□□ -2.01
NUDCD3Q8IVD9 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.52□□□□□ -2.01
NUDCD3Q8IVD9 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.52□□□□□ -2.01
NUDCD3Q8IVD9 AP002748.2-201ENST00000528671 348 ntBASIC2.52□□□□□ -2.01
NUDCD3Q8IVD9 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.52□□□□□ -2.01
NUDCD3Q8IVD9 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.52□□□□□ -2.01
NUDCD3Q8IVD9 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.52□□□□□ -2.01
NUDCD3Q8IVD9 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.52□□□□□ -2.01
NUDCD3Q8IVD9 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.52□□□□□ -2.01
NUDCD3Q8IVD9 OR1M4P-201ENST00000589199 287 ntBASIC2.52□□□□□ -2.01
NUDCD3Q8IVD9 AL049779.4-201ENST00000604500 156 ntBASIC2.52□□□□□ -2.01
NUDCD3Q8IVD9 AC080013.3-201ENST00000606839 578 ntBASIC2.52□□□□□ -2.01
NUDCD3Q8IVD9 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.52□□□□□ -2.01
NUDCD3Q8IVD9 AC103710.4-201ENST00000609301 899 ntBASIC2.52□□□□□ -2.01
NUDCD3Q8IVD9 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC2.52□□□□□ -2.01
NUDCD3Q8IVD9 AC073308.1-201ENST00000623696 305 ntBASIC2.52□□□□□ -2.01
NUDCD3Q8IVD9 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.52□□□□□ -2.01
NUDCD3Q8IVD9 ZNF271P-202ENST00000465539 1970 ntBASIC2.52□□□□□ -2.01
NUDCD3Q8IVD9 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
NUDCD3Q8IVD9 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.51□□□□□ -2.01
NUDCD3Q8IVD9 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
NUDCD3Q8IVD9 ZNF29P-201ENST00000225587 168 ntBASIC2.51□□□□□ -2.01
NUDCD3Q8IVD9 RNU4-92P-201ENST00000363783 136 ntBASIC2.51□□□□□ -2.01
NUDCD3Q8IVD9 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
NUDCD3Q8IVD9 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.51□□□□□ -2.01
NUDCD3Q8IVD9 MIR491-201ENST00000384877 84 ntBASIC2.51□□□□□ -2.01
NUDCD3Q8IVD9 AL162578.1-201ENST00000406202 378 ntBASIC2.51□□□□□ -2.01
NUDCD3Q8IVD9 AC080125.1-201ENST00000414888 684 ntBASIC2.51□□□□□ -2.01
NUDCD3Q8IVD9 MTCO2P23-201ENST00000425216 680 ntBASIC2.51□□□□□ -2.01
NUDCD3Q8IVD9 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.51□□□□□ -2.01
NUDCD3Q8IVD9 AC091390.3-201ENST00000426478 338 ntBASIC2.51□□□□□ -2.01
NUDCD3Q8IVD9 AC129850.1-201ENST00000436203 508 ntBASIC2.51□□□□□ -2.01
NUDCD3Q8IVD9 ARPC3P1-201ENST00000437218 533 ntBASIC2.51□□□□□ -2.01
NUDCD3Q8IVD9 MTCO2P20-201ENST00000437339 673 ntBASIC2.51□□□□□ -2.01
NUDCD3Q8IVD9 COX7BP2-201ENST00000437976 242 ntBASIC2.51□□□□□ -2.01
NUDCD3Q8IVD9 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.51□□□□□ -2.01
NUDCD3Q8IVD9 WASF1P1-201ENST00000447560 1131 ntBASIC2.51□□□□□ -2.01
NUDCD3Q8IVD9 USP9YP10-201ENST00000454868 628 ntBASIC2.51□□□□□ -2.01
NUDCD3Q8IVD9 ATG12P2-201ENST00000456830 416 ntBASIC2.51□□□□□ -2.01
NUDCD3Q8IVD9 RNA5SP367-201ENST00000516557 118 ntBASIC2.51□□□□□ -2.01
NUDCD3Q8IVD9 RNU6-1282P-201ENST00000516735 96 ntBASIC2.51□□□□□ -2.01
NUDCD3Q8IVD9 RNA5SP402-201ENST00000517148 110 ntBASIC2.51□□□□□ -2.01
NUDCD3Q8IVD9 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.51□□□□□ -2.01
NUDCD3Q8IVD9 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.51□□□□□ -2.01
NUDCD3Q8IVD9 OR4R1P-201ENST00000529879 463 ntBASIC2.51□□□□□ -2.01
NUDCD3Q8IVD9 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.51□□□□□ -2.01
NUDCD3Q8IVD9 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.51□□□□□ -2.01
NUDCD3Q8IVD9 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.51□□□□□ -2.01
NUDCD3Q8IVD9 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.51□□□□□ -2.01
NUDCD3Q8IVD9 MIR3908-201ENST00000579798 126 ntBASIC2.51□□□□□ -2.01
NUDCD3Q8IVD9 TPMTP1-201ENST00000592307 737 ntBASIC2.51□□□□□ -2.01
NUDCD3Q8IVD9 AL136363.1-201ENST00000605349 337 ntBASIC2.51□□□□□ -2.01
NUDCD3Q8IVD9 AL139022.2-201ENST00000606934 443 ntBASIC2.51□□□□□ -2.01
NUDCD3Q8IVD9 AL137847.3-201ENST00000611521 109 ntBASIC2.51□□□□□ -2.01
NUDCD3Q8IVD9 AC034102.8-201ENST00000615146 484 ntBASIC2.51□□□□□ -2.01
NUDCD3Q8IVD9 FO624990.1-201ENST00000636373 85 ntBASIC2.51□□□□□ -2.01
NUDCD3Q8IVD9 MIR4275-201ENST00000636486 87 ntBASIC2.51□□□□□ -2.01
NUDCD3Q8IVD9 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.51□□□□□ -2.01
NUDCD3Q8IVD9 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
NUDCD3Q8IVD9 AL365361.1-201ENST00000566942 3481 ntBASIC2.51□□□□□ -2.01
NUDCD3Q8IVD9 AC093536.2-201ENST00000565257 1406 ntBASIC2.51□□□□□ -2.01
NUDCD3Q8IVD9 AP000776.1-201ENST00000530032 1663 ntBASIC2.5□□□□□ -2.01
NUDCD3Q8IVD9 AL138713.1-201ENST00000624026 2130 ntBASIC2.5□□□□□ -2.01
NUDCD3Q8IVD9 GNG5P1-201ENST00000255500 204 ntBASIC2.5□□□□□ -2.01
NUDCD3Q8IVD9 RNU6-193P-201ENST00000410977 107 ntBASIC2.5□□□□□ -2.01
NUDCD3Q8IVD9 RNU6-516P-201ENST00000411381 104 ntBASIC2.5□□□□□ -2.01
NUDCD3Q8IVD9 AC099548.1-201ENST00000421443 426 ntBASIC2.5□□□□□ -2.01
NUDCD3Q8IVD9 MTCO2P17-201ENST00000424336 677 ntBASIC2.5□□□□□ -2.01
NUDCD3Q8IVD9 SUMO1P4-201ENST00000429430 302 ntBASIC2.5□□□□□ -2.01
NUDCD3Q8IVD9 USP9YP24-201ENST00000434374 697 ntBASIC2.5□□□□□ -2.01
NUDCD3Q8IVD9 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.5□□□□□ -2.01
NUDCD3Q8IVD9 RPS15AP7-201ENST00000439294 405 ntBASIC2.5□□□□□ -2.01
NUDCD3Q8IVD9 AL714022.1-201ENST00000439897 151 ntBASIC2.5□□□□□ -2.01
NUDCD3Q8IVD9 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.5□□□□□ -2.01
NUDCD3Q8IVD9 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.5□□□□□ -2.01
NUDCD3Q8IVD9 USP9YP17-201ENST00000444617 696 ntBASIC2.5□□□□□ -2.01
NUDCD3Q8IVD9 CBWD4P-201ENST00000445695 655 ntBASIC2.5□□□□□ -2.01
NUDCD3Q8IVD9 BMI1P1-201ENST00000445879 941 ntBASIC2.5□□□□□ -2.01
NUDCD3Q8IVD9 DDX3P2-201ENST00000446138 111 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms