Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 MRPS31P2-201ENST00000451581 518 ntBASIC3.99□□□□□ -1.77
VRK3Q8IV63 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
VRK3Q8IV63 AC006511.1-201ENST00000470614 315 ntBASIC3.99□□□□□ -1.77
VRK3Q8IV63 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.99□□□□□ -1.77
VRK3Q8IV63 Y_RNA.654-201ENST00000497848 106 ntBASIC3.99□□□□□ -1.77
VRK3Q8IV63 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.99□□□□□ -1.77
VRK3Q8IV63 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
VRK3Q8IV63 AC017037.2-201ENST00000513850 890 ntBASIC3.99□□□□□ -1.77
VRK3Q8IV63 AC090136.1-201ENST00000520009 240 ntBASIC3.99□□□□□ -1.77
VRK3Q8IV63 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.99□□□□□ -1.77
VRK3Q8IV63 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.99□□□□□ -1.77
VRK3Q8IV63 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.99□□□□□ -1.77
VRK3Q8IV63 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.99□□□□□ -1.77
VRK3Q8IV63 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.99□□□□□ -1.77
VRK3Q8IV63 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.99□□□□□ -1.77
VRK3Q8IV63 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC3.99□□□□□ -1.77
VRK3Q8IV63 AC012603.1-201ENST00000606424 528 ntBASIC3.99□□□□□ -1.77
VRK3Q8IV63 uc_338.34-201ENST00000617467 174 ntBASIC3.99□□□□□ -1.77
VRK3Q8IV63 AC011155.2-201ENST00000623202 216 ntBASIC3.99□□□□□ -1.77
VRK3Q8IV63 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.99□□□□□ -1.77
VRK3Q8IV63 BMS1P21-201ENST00000634565 365 ntBASIC3.99□□□□□ -1.77
VRK3Q8IV63 MIR492-201ENST00000638676 116 ntBASIC3.99□□□□□ -1.77
VRK3Q8IV63 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.99□□□□□ -1.77
VRK3Q8IV63 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
VRK3Q8IV63 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.99□□□□□ -1.77
VRK3Q8IV63 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.98□□□□□ -1.77
VRK3Q8IV63 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.98□□□□□ -1.77
VRK3Q8IV63 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
VRK3Q8IV63 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
VRK3Q8IV63 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
VRK3Q8IV63 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
VRK3Q8IV63 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
VRK3Q8IV63 Y_RNA.148-201ENST00000363557 117 ntBASIC3.98□□□□□ -1.77
VRK3Q8IV63 RNU6-82P-201ENST00000363970 107 ntBASIC3.98□□□□□ -1.77
VRK3Q8IV63 Y_RNA.193-201ENST00000363979 102 ntBASIC3.98□□□□□ -1.77
VRK3Q8IV63 RNU6-1243P-201ENST00000364028 107 ntBASIC3.98□□□□□ -1.77
VRK3Q8IV63 SNORA70C-201ENST00000384538 135 ntBASIC3.98□□□□□ -1.77
VRK3Q8IV63 MT-TR-201ENST00000387439 65 ntBASIC3.98□□□□□ -1.77
VRK3Q8IV63 SSXP10-201ENST00000402595 565 ntBASIC3.98□□□□□ -1.77
VRK3Q8IV63 RNA5SP317-201ENST00000410176 116 ntBASIC3.98□□□□□ -1.77
VRK3Q8IV63 RNA5SP104-201ENST00000410989 118 ntBASIC3.98□□□□□ -1.77
VRK3Q8IV63 RNA5SP311-201ENST00000411290 116 ntBASIC3.98□□□□□ -1.77
VRK3Q8IV63 RNU6-1304P-201ENST00000411374 106 ntBASIC3.98□□□□□ -1.77
VRK3Q8IV63 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.98□□□□□ -1.77
VRK3Q8IV63 RAC1P3-201ENST00000416129 580 ntBASIC3.98□□□□□ -1.77
VRK3Q8IV63 AC004552.1-201ENST00000419089 348 ntBASIC3.98□□□□□ -1.77
VRK3Q8IV63 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.98□□□□□ -1.77
VRK3Q8IV63 RPL31P12-201ENST00000422587 358 ntBASIC3.98□□□□□ -1.77
VRK3Q8IV63 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.98□□□□□ -1.77
VRK3Q8IV63 RPL36AP6-201ENST00000435770 321 ntBASIC3.98□□□□□ -1.77
VRK3Q8IV63 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.98□□□□□ -1.77
VRK3Q8IV63 RAC1P7-201ENST00000445367 377 ntBASIC3.98□□□□□ -1.77
VRK3Q8IV63 AC016696.1-201ENST00000446949 318 ntBASIC3.98□□□□□ -1.77
VRK3Q8IV63 SNRPFP3-201ENST00000457792 225 ntBASIC3.98□□□□□ -1.77
VRK3Q8IV63 RPS26P3-201ENST00000470205 348 ntBASIC3.98□□□□□ -1.77
VRK3Q8IV63 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.98□□□□□ -1.77
VRK3Q8IV63 RN7SL809P-201ENST00000482040 297 ntBASIC3.98□□□□□ -1.77
VRK3Q8IV63 AC090543.2-201ENST00000483963 348 ntBASIC3.98□□□□□ -1.77
VRK3Q8IV63 AC004057.1-201ENST00000485827 348 ntBASIC3.98□□□□□ -1.77
VRK3Q8IV63 RPL29P14-201ENST00000495837 428 ntBASIC3.98□□□□□ -1.77
VRK3Q8IV63 AC025445.1-201ENST00000502728 300 ntBASIC3.98□□□□□ -1.77
VRK3Q8IV63 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
VRK3Q8IV63 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.98□□□□□ -1.77
VRK3Q8IV63 RNA5SP154-201ENST00000516193 111 ntBASIC3.98□□□□□ -1.77
VRK3Q8IV63 RNA5SP315-201ENST00000516340 116 ntBASIC3.98□□□□□ -1.77
VRK3Q8IV63 RNU7-51P-201ENST00000516560 62 ntBASIC3.98□□□□□ -1.77
VRK3Q8IV63 RNA5SP312-201ENST00000517068 116 ntBASIC3.98□□□□□ -1.77
VRK3Q8IV63 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.98□□□□□ -1.77
VRK3Q8IV63 HMGB1P41-201ENST00000520234 440 ntBASIC3.98□□□□□ -1.77
VRK3Q8IV63 MTND4P7-201ENST00000523876 130 ntBASIC3.98□□□□□ -1.77
VRK3Q8IV63 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.98□□□□□ -1.77
VRK3Q8IV63 AC110588.1-201ENST00000559699 137 ntBASIC3.98□□□□□ -1.77
VRK3Q8IV63 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.98□□□□□ -1.77
VRK3Q8IV63 HMGB3P26-201ENST00000560051 582 ntBASIC3.98□□□□□ -1.77
VRK3Q8IV63 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
VRK3Q8IV63 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC3.98□□□□□ -1.77
VRK3Q8IV63 MIR4680-201ENST00000580906 66 ntBASIC3.98□□□□□ -1.77
VRK3Q8IV63 AC024619.4-201ENST00000580924 316 ntBASIC3.98□□□□□ -1.77
VRK3Q8IV63 MIR5690-201ENST00000583739 73 ntBASIC3.98□□□□□ -1.77
VRK3Q8IV63 MIR3672-201ENST00000584290 82 ntBASIC3.98□□□□□ -1.77
VRK3Q8IV63 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.98□□□□□ -1.77
VRK3Q8IV63 AL451044.1-201ENST00000604867 238 ntBASIC3.98□□□□□ -1.77
VRK3Q8IV63 AC010680.4-201ENST00000605334 543 ntBASIC3.98□□□□□ -1.77
VRK3Q8IV63 AC011373.1-201ENST00000607270 237 ntBASIC3.98□□□□□ -1.77
VRK3Q8IV63 AC022893.3-201ENST00000607665 437 ntBASIC3.98□□□□□ -1.77
VRK3Q8IV63 Z82243.1-201ENST00000609432 473 ntBASIC3.98□□□□□ -1.77
VRK3Q8IV63 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.98□□□□□ -1.77
VRK3Q8IV63 AL390240.1-201ENST00000612950 384 ntBASIC3.98□□□□□ -1.77
VRK3Q8IV63 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.98□□□□□ -1.77
VRK3Q8IV63 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
VRK3Q8IV63 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.98□□□□□ -1.77
VRK3Q8IV63 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
VRK3Q8IV63 AP000756.2-201ENST00000624168 2567 ntBASIC3.98□□□□□ -1.77
VRK3Q8IV63 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.97□□□□□ -1.77
VRK3Q8IV63 AC016588.2-201ENST00000632484 3021 ntBASIC3.97□□□□□ -1.77
VRK3Q8IV63 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
VRK3Q8IV63 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VRK3Q8IV63 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.97□□□□□ -1.77
VRK3Q8IV63 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
VRK3Q8IV63 AC093535.2-201ENST00000624769 2326 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 196.9 ms