Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 MTND4P7-201ENST00000523876 130 ntBASIC5.18□□□□□ -1.58
USP48Q86UV5 RANP3-201ENST00000530970 276 ntBASIC5.18□□□□□ -1.58
USP48Q86UV5 AP003072.1-201ENST00000531740 145 ntBASIC5.18□□□□□ -1.58
USP48Q86UV5 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC5.18□□□□□ -1.58
USP48Q86UV5 NACA-211ENST00000548563 827 ntTSL 5 BASIC5.18□□□□□ -1.58
USP48Q86UV5 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC5.18□□□□□ -1.58
USP48Q86UV5 OR4H12P-201ENST00000556269 907 ntBASIC5.18□□□□□ -1.58
USP48Q86UV5 HSPE1P5-201ENST00000561489 272 ntBASIC5.18□□□□□ -1.58
USP48Q86UV5 AL022099.1-201ENST00000604551 712 ntBASIC5.18□□□□□ -1.58
USP48Q86UV5 AL390240.1-201ENST00000612950 384 ntBASIC5.18□□□□□ -1.58
USP48Q86UV5 AC004696.1-201ENST00000614345 607 ntBASIC5.18□□□□□ -1.58
USP48Q86UV5 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
USP48Q86UV5 SMCR2_2.1-201ENST00000619783 161 ntBASIC5.18□□□□□ -1.58
USP48Q86UV5 AL160413.1-201ENST00000622780 310 ntBASIC5.18□□□□□ -1.58
USP48Q86UV5 AC091953.5-201ENST00000622919 233 ntBASIC5.18□□□□□ -1.58
USP48Q86UV5 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC5.18□□□□□ -1.58
USP48Q86UV5 TPTEP1-208ENST00000636884 213 ntBASIC5.18□□□□□ -1.58
USP48Q86UV5 AC103710.2-202ENST00000641454 2853 ntBASIC5.18□□□□□ -1.58
USP48Q86UV5 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
USP48Q86UV5 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
USP48Q86UV5 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC5.18□□□□□ -1.58
USP48Q86UV5 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
USP48Q86UV5 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
USP48Q86UV5 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
USP48Q86UV5 RNU1-14P-201ENST00000362759 152 ntBASIC5.17□□□□□ -1.58
USP48Q86UV5 SNORA63-201ENST00000363450 132 ntBASIC5.17□□□□□ -1.58
USP48Q86UV5 SNORA51.2-201ENST00000364595 132 ntBASIC5.17□□□□□ -1.58
USP48Q86UV5 RNU6-1074P-201ENST00000383995 104 ntBASIC5.17□□□□□ -1.58
USP48Q86UV5 AL122016.1-201ENST00000403365 367 ntBASIC5.17□□□□□ -1.58
USP48Q86UV5 SNORA11.2-201ENST00000408318 127 ntBASIC5.17□□□□□ -1.58
USP48Q86UV5 RPL7P46-201ENST00000425129 740 ntBASIC5.17□□□□□ -1.58
USP48Q86UV5 AL157831.1-201ENST00000426134 473 ntBASIC5.17□□□□□ -1.58
USP48Q86UV5 ATP5HP2-201ENST00000433885 485 ntBASIC5.17□□□□□ -1.58
USP48Q86UV5 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC5.17□□□□□ -1.58
USP48Q86UV5 AL133547.1-201ENST00000448546 220 ntBASIC5.17□□□□□ -1.58
USP48Q86UV5 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.17□□□□□ -1.58
USP48Q86UV5 AL162388.1-201ENST00000450912 352 ntBASIC5.17□□□□□ -1.58
USP48Q86UV5 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC5.17□□□□□ -1.58
USP48Q86UV5 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC5.17□□□□□ -1.58
USP48Q86UV5 SNORD108-201ENST00000459332 71 ntBASIC5.17□□□□□ -1.58
USP48Q86UV5 AC103851.1-201ENST00000506833 274 ntBASIC5.17□□□□□ -1.58
USP48Q86UV5 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.17□□□□□ -1.58
USP48Q86UV5 AC099522.1-202ENST00000514718 367 ntBASIC5.17□□□□□ -1.58
USP48Q86UV5 SCARNA13-201ENST00000516672 275 ntBASIC5.17□□□□□ -1.58
USP48Q86UV5 IFITM8P-201ENST00000522529 394 ntBASIC5.17□□□□□ -1.58
USP48Q86UV5 AP000889.1-201ENST00000530968 660 ntBASIC5.17□□□□□ -1.58
USP48Q86UV5 AL137161.1-201ENST00000532231 390 ntBASIC5.17□□□□□ -1.58
USP48Q86UV5 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC5.17□□□□□ -1.58
USP48Q86UV5 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC5.17□□□□□ -1.58
USP48Q86UV5 AL354984.3-201ENST00000604803 325 ntBASIC5.17□□□□□ -1.58
USP48Q86UV5 AC015813.4-201ENST00000610469 179 ntBASIC5.17□□□□□ -1.58
USP48Q86UV5 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC5.17□□□□□ -1.58
USP48Q86UV5 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
USP48Q86UV5 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.17□□□□□ -1.58
USP48Q86UV5 AC007998.5-201ENST00000622938 237 ntBASIC5.17□□□□□ -1.58
USP48Q86UV5 C2orf27A-204ENST00000623058 969 ntBASIC5.17□□□□□ -1.58
USP48Q86UV5 AL445363.3-201ENST00000623080 671 ntBASIC5.17□□□□□ -1.58
USP48Q86UV5 TEX41-300ENST00000631048 69 ntTSL 5 BASIC5.17□□□□□ -1.58
USP48Q86UV5 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC5.17□□□□□ -1.58
USP48Q86UV5 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
USP48Q86UV5 AP004289.2-201ENST00000444413 1457 ntBASIC5.17□□□□□ -1.58
USP48Q86UV5 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.17□□□□□ -1.58
USP48Q86UV5 AC068254.2-201ENST00000623938 3577 ntBASIC5.17□□□□□ -1.58
USP48Q86UV5 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
USP48Q86UV5 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
USP48Q86UV5 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC5.16□□□□□ -1.58
USP48Q86UV5 TPTE2P4-201ENST00000258589 1605 ntBASIC5.16□□□□□ -1.58
USP48Q86UV5 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
USP48Q86UV5 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
USP48Q86UV5 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.16□□□□□ -1.58
USP48Q86UV5 RNA5SP307-201ENST00000362863 116 ntBASIC5.16□□□□□ -1.58
USP48Q86UV5 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
USP48Q86UV5 RNU6-76P-201ENST00000384060 104 ntBASIC5.16□□□□□ -1.58
USP48Q86UV5 MIR513A2-201ENST00000385249 127 ntBASIC5.16□□□□□ -1.58
USP48Q86UV5 UBE2V1P2-201ENST00000397758 440 ntBASIC5.16□□□□□ -1.58
USP48Q86UV5 AL592114.1-201ENST00000403842 483 ntBASIC5.16□□□□□ -1.58
USP48Q86UV5 AL590004.1-201ENST00000405321 300 ntBASIC5.16□□□□□ -1.58
USP48Q86UV5 AC108032.1-201ENST00000416706 207 ntBASIC5.16□□□□□ -1.58
USP48Q86UV5 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.16□□□□□ -1.58
USP48Q86UV5 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC5.16□□□□□ -1.58
USP48Q86UV5 MTND4P19-201ENST00000446659 478 ntBASIC5.16□□□□□ -1.58
USP48Q86UV5 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC5.16□□□□□ -1.58
USP48Q86UV5 AC233279.1-201ENST00000455300 423 ntBASIC5.16□□□□□ -1.58
USP48Q86UV5 RPL5P30-201ENST00000465511 891 ntBASIC5.16□□□□□ -1.58
USP48Q86UV5 AC098591.2-201ENST00000510152 315 ntBASIC5.16□□□□□ -1.58
USP48Q86UV5 RNU4-49P-201ENST00000516080 140 ntBASIC5.16□□□□□ -1.58
USP48Q86UV5 RN7SKP256-201ENST00000517201 314 ntBASIC5.16□□□□□ -1.58
USP48Q86UV5 TRMT10BP1-201ENST00000519377 943 ntBASIC5.16□□□□□ -1.58
USP48Q86UV5 RPL7P20-201ENST00000520308 745 ntBASIC5.16□□□□□ -1.58
USP48Q86UV5 AC069240.1-201ENST00000548774 375 ntBASIC5.16□□□□□ -1.58
USP48Q86UV5 DYNLL1P4-201ENST00000549314 266 ntBASIC5.16□□□□□ -1.58
USP48Q86UV5 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC5.16□□□□□ -1.58
USP48Q86UV5 MIR4742-201ENST00000581069 85 ntBASIC5.16□□□□□ -1.58
USP48Q86UV5 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC5.16□□□□□ -1.58
USP48Q86UV5 AL606490.9-201ENST00000603331 271 ntBASIC5.16□□□□□ -1.58
USP48Q86UV5 AL365204.3-201ENST00000612448 685 ntBASIC5.16□□□□□ -1.58
USP48Q86UV5 SDR42E1P2-201ENST00000614861 481 ntBASIC5.16□□□□□ -1.58
USP48Q86UV5 RMST_7.1-201ENST00000621935 268 ntBASIC5.16□□□□□ -1.58
USP48Q86UV5 AC007546.2-201ENST00000623996 360 ntBASIC5.16□□□□□ -1.58
USP48Q86UV5 AL133243.3-201ENST00000617415 3004 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms