Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 uc_338.1-201ENST00000612113 180 ntBASIC3.35□□□□□ -1.87
PRPF39Q86UA1 AC122133.1-201ENST00000613964 233 ntBASIC3.35□□□□□ -1.87
PRPF39Q86UA1 MIR7844-201ENST00000616161 122 ntBASIC3.35□□□□□ -1.87
PRPF39Q86UA1 AC079248.2-201ENST00000623779 326 ntBASIC3.35□□□□□ -1.87
PRPF39Q86UA1 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.35□□□□□ -1.87
PRPF39Q86UA1 AC010149.2-201ENST00000637608 315 ntBASIC3.35□□□□□ -1.87
PRPF39Q86UA1 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.35□□□□□ -1.87
PRPF39Q86UA1 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PRPF39Q86UA1 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.87
PRPF39Q86UA1 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PRPF39Q86UA1 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
PRPF39Q86UA1 RNU6-533P-201ENST00000384144 107 ntBASIC3.34□□□□□ -1.87
PRPF39Q86UA1 SNORA48.2-201ENST00000390926 124 ntBASIC3.34□□□□□ -1.87
PRPF39Q86UA1 RPL17P12-201ENST00000413391 526 ntBASIC3.34□□□□□ -1.87
PRPF39Q86UA1 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.34□□□□□ -1.87
PRPF39Q86UA1 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.34□□□□□ -1.87
PRPF39Q86UA1 TIMM9P1-201ENST00000436122 256 ntBASIC3.34□□□□□ -1.87
PRPF39Q86UA1 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.34□□□□□ -1.87
PRPF39Q86UA1 AC005094.1-201ENST00000440420 368 ntBASIC3.34□□□□□ -1.87
PRPF39Q86UA1 AC118469.1-201ENST00000442943 488 ntBASIC3.34□□□□□ -1.87
PRPF39Q86UA1 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.34□□□□□ -1.87
PRPF39Q86UA1 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.34□□□□□ -1.87
PRPF39Q86UA1 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.34□□□□□ -1.87
PRPF39Q86UA1 AP002884.2-201ENST00000471647 395 ntBASIC3.34□□□□□ -1.87
PRPF39Q86UA1 AC006483.1-201ENST00000487308 313 ntBASIC3.34□□□□□ -1.87
PRPF39Q86UA1 AC112204.1-201ENST00000502591 103 ntBASIC3.34□□□□□ -1.87
PRPF39Q86UA1 AC025881.1-201ENST00000518851 512 ntBASIC3.34□□□□□ -1.87
PRPF39Q86UA1 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.34□□□□□ -1.87
PRPF39Q86UA1 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.34□□□□□ -1.87
PRPF39Q86UA1 AMZ2P1-203ENST00000565833 850 ntBASIC3.34□□□□□ -1.87
PRPF39Q86UA1 AC091489.2-201ENST00000566263 604 ntBASIC3.34□□□□□ -1.87
PRPF39Q86UA1 AC145350.1-201ENST00000567426 208 ntBASIC3.34□□□□□ -1.87
PRPF39Q86UA1 AC005951.1-201ENST00000576706 485 ntBASIC3.34□□□□□ -1.87
PRPF39Q86UA1 KC877982.1-201ENST00000602313 470 ntBASIC3.34□□□□□ -1.87
PRPF39Q86UA1 AL360219.1-201ENST00000610230 366 ntBASIC3.34□□□□□ -1.87
PRPF39Q86UA1 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.34□□□□□ -1.87
PRPF39Q86UA1 SNORD39.4-201ENST00000620099 78 ntBASIC3.34□□□□□ -1.87
PRPF39Q86UA1 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.34□□□□□ -1.87
PRPF39Q86UA1 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.34□□□□□ -1.87
PRPF39Q86UA1 ZNF833P-201ENST00000424938 1494 ntBASIC3.34□□□□□ -1.88
PRPF39Q86UA1 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
PRPF39Q86UA1 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.34□□□□□ -1.88
PRPF39Q86UA1 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.34□□□□□ -1.88
PRPF39Q86UA1 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
PRPF39Q86UA1 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.33□□□□□ -1.88
PRPF39Q86UA1 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PRPF39Q86UA1 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
PRPF39Q86UA1 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.33□□□□□ -1.88
PRPF39Q86UA1 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
PRPF39Q86UA1 RNA5SP139-201ENST00000364340 117 ntBASIC3.33□□□□□ -1.88
PRPF39Q86UA1 U3.11-201ENST00000364476 212 ntBASIC3.33□□□□□ -1.88
PRPF39Q86UA1 RNU5A-2P-201ENST00000384337 116 ntBASIC3.33□□□□□ -1.88
PRPF39Q86UA1 RNU2-33P-201ENST00000410344 192 ntBASIC3.33□□□□□ -1.88
PRPF39Q86UA1 RNA5SP229-201ENST00000410809 99 ntBASIC3.33□□□□□ -1.88
PRPF39Q86UA1 RNU6-920P-201ENST00000410926 92 ntBASIC3.33□□□□□ -1.88
PRPF39Q86UA1 AC096664.2-201ENST00000411843 406 ntBASIC3.33□□□□□ -1.88
PRPF39Q86UA1 USP9YP26-201ENST00000421008 661 ntBASIC3.33□□□□□ -1.88
PRPF39Q86UA1 AL353678.1-201ENST00000422735 741 ntBASIC3.33□□□□□ -1.88
PRPF39Q86UA1 ZNF863P-201ENST00000426746 417 ntBASIC3.33□□□□□ -1.88
PRPF39Q86UA1 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.33□□□□□ -1.88
PRPF39Q86UA1 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.33□□□□□ -1.88
PRPF39Q86UA1 AC115115.1-201ENST00000449927 248 ntBASIC3.33□□□□□ -1.88
PRPF39Q86UA1 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.33□□□□□ -1.88
PRPF39Q86UA1 ART2BP-201ENST00000453501 499 ntBASIC3.33□□□□□ -1.88
PRPF39Q86UA1 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC3.33□□□□□ -1.88
PRPF39Q86UA1 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.33□□□□□ -1.88
PRPF39Q86UA1 AL139824.2-201ENST00000458731 1095 ntBASIC3.33□□□□□ -1.88
PRPF39Q86UA1 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.33□□□□□ -1.88
PRPF39Q86UA1 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.33□□□□□ -1.88
PRPF39Q86UA1 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.33□□□□□ -1.88
PRPF39Q86UA1 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
PRPF39Q86UA1 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
PRPF39Q86UA1 AC005178.1-201ENST00000508392 440 ntBASIC3.33□□□□□ -1.88
PRPF39Q86UA1 MTND1P22-201ENST00000510572 951 ntBASIC3.33□□□□□ -1.88
PRPF39Q86UA1 RNU6-759P-201ENST00000516740 103 ntBASIC3.33□□□□□ -1.88
PRPF39Q86UA1 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.33□□□□□ -1.88
PRPF39Q86UA1 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.33□□□□□ -1.88
PRPF39Q86UA1 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.33□□□□□ -1.88
PRPF39Q86UA1 AC123904.2-201ENST00000548059 300 ntBASIC3.33□□□□□ -1.88
PRPF39Q86UA1 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.33□□□□□ -1.88
PRPF39Q86UA1 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.33□□□□□ -1.88
PRPF39Q86UA1 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC3.33□□□□□ -1.88
PRPF39Q86UA1 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.33□□□□□ -1.88
PRPF39Q86UA1 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.33□□□□□ -1.88
PRPF39Q86UA1 AC068135.2-201ENST00000569293 1028 ntBASIC3.33□□□□□ -1.88
PRPF39Q86UA1 AL161729.4-201ENST00000604650 476 ntBASIC3.33□□□□□ -1.88
PRPF39Q86UA1 AC073657.2-201ENST00000605661 303 ntBASIC3.33□□□□□ -1.88
PRPF39Q86UA1 AC009159.1-201ENST00000618386 642 ntBASIC3.33□□□□□ -1.88
PRPF39Q86UA1 AC073476.4-201ENST00000628409 72 ntBASIC3.33□□□□□ -1.88
PRPF39Q86UA1 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
PRPF39Q86UA1 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PRPF39Q86UA1 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PRPF39Q86UA1 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.33□□□□□ -1.88
PRPF39Q86UA1 MTND5P27-201ENST00000428871 1720 ntBASIC3.33□□□□□ -1.88
PRPF39Q86UA1 AC022336.2-201ENST00000568966 2538 ntBASIC3.32□□□□□ -1.88
PRPF39Q86UA1 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PRPF39Q86UA1 GNG5P1-201ENST00000255500 204 ntBASIC3.32□□□□□ -1.88
PRPF39Q86UA1 AL359634.1-202ENST00000404721 284 ntBASIC3.32□□□□□ -1.88
PRPF39Q86UA1 RNU2-62P-201ENST00000410868 191 ntBASIC3.32□□□□□ -1.88
PRPF39Q86UA1 RNU4-47P-201ENST00000410876 114 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms