Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.25□□□□□ -1.89
LDB1Q86U70 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
LDB1Q86U70 AP002453.2-201ENST00000533503 320 ntBASIC3.25□□□□□ -1.89
LDB1Q86U70 AC004024.1-201ENST00000549244 247 ntBASIC3.25□□□□□ -1.89
LDB1Q86U70 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.25□□□□□ -1.89
LDB1Q86U70 MIR3682-201ENST00000581338 84 ntBASIC3.25□□□□□ -1.89
LDB1Q86U70 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.25□□□□□ -1.89
LDB1Q86U70 AP001506.1-201ENST00000615444 211 ntBASIC3.25□□□□□ -1.89
LDB1Q86U70 AC084757.4-201ENST00000616350 526 ntBASIC3.25□□□□□ -1.89
LDB1Q86U70 AC012314.7-201ENST00000619693 93 ntBASIC3.25□□□□□ -1.89
LDB1Q86U70 SNORD39.4-201ENST00000620099 78 ntBASIC3.25□□□□□ -1.89
LDB1Q86U70 U6.105-201ENST00000637379 88 ntBASIC3.25□□□□□ -1.89
LDB1Q86U70 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
LDB1Q86U70 AC007256.1-201ENST00000392253 2765 ntBASIC3.25□□□□□ -1.89
LDB1Q86U70 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
LDB1Q86U70 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LDB1Q86U70 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LDB1Q86U70 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LDB1Q86U70 OR1S2-201ENST00000302592 978 ntBASIC3.24□□□□□ -1.89
LDB1Q86U70 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.24□□□□□ -1.89
LDB1Q86U70 RNU1-33P-201ENST00000364249 162 ntBASIC3.24□□□□□ -1.89
LDB1Q86U70 RNU4-40P-201ENST00000364351 143 ntBASIC3.24□□□□□ -1.89
LDB1Q86U70 MIR183-201ENST00000384958 110 ntBASIC3.24□□□□□ -1.89
LDB1Q86U70 RPS15AP12-201ENST00000419498 388 ntBASIC3.24□□□□□ -1.89
LDB1Q86U70 RPL31P12-201ENST00000422587 358 ntBASIC3.24□□□□□ -1.89
LDB1Q86U70 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.24□□□□□ -1.89
LDB1Q86U70 AL589872.1-201ENST00000426602 288 ntBASIC3.24□□□□□ -1.89
LDB1Q86U70 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.24□□□□□ -1.89
LDB1Q86U70 AL451062.2-201ENST00000427515 271 ntBASIC3.24□□□□□ -1.89
LDB1Q86U70 AC097713.2-201ENST00000430199 356 ntBASIC3.24□□□□□ -1.89
LDB1Q86U70 AC119618.1-201ENST00000434191 222 ntBASIC3.24□□□□□ -1.89
LDB1Q86U70 TAAR7P-201ENST00000436141 242 ntBASIC3.24□□□□□ -1.89
LDB1Q86U70 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.24□□□□□ -1.89
LDB1Q86U70 MTND4P32-201ENST00000437189 1237 ntBASIC3.24□□□□□ -1.89
LDB1Q86U70 SETP5-201ENST00000437270 562 ntBASIC3.24□□□□□ -1.89
LDB1Q86U70 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.24□□□□□ -1.89
LDB1Q86U70 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.24□□□□□ -1.89
LDB1Q86U70 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.24□□□□□ -1.89
LDB1Q86U70 AC115115.1-201ENST00000449927 248 ntBASIC3.24□□□□□ -1.89
LDB1Q86U70 AL122001.1-201ENST00000457027 370 ntBASIC3.24□□□□□ -1.89
LDB1Q86U70 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.24□□□□□ -1.89
LDB1Q86U70 AP002884.2-201ENST00000471647 395 ntBASIC3.24□□□□□ -1.89
LDB1Q86U70 RPS27AP1-201ENST00000475545 471 ntBASIC3.24□□□□□ -1.89
LDB1Q86U70 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.24□□□□□ -1.89
LDB1Q86U70 RPL30P5-201ENST00000494923 336 ntBASIC3.24□□□□□ -1.89
LDB1Q86U70 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.24□□□□□ -1.89
LDB1Q86U70 AC010424.1-201ENST00000506336 297 ntBASIC3.24□□□□□ -1.89
LDB1Q86U70 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.24□□□□□ -1.89
LDB1Q86U70 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.24□□□□□ -1.89
LDB1Q86U70 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.24□□□□□ -1.89
LDB1Q86U70 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.24□□□□□ -1.89
LDB1Q86U70 SEPT7P9-203ENST00000604116 343 ntBASIC3.24□□□□□ -1.89
LDB1Q86U70 AC008962.1-201ENST00000605729 304 ntBASIC3.24□□□□□ -1.89
LDB1Q86U70 AC080013.6-201ENST00000606185 215 ntBASIC3.24□□□□□ -1.89
LDB1Q86U70 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.24□□□□□ -1.89
LDB1Q86U70 RN7SKP299-201ENST00000606679 301 ntBASIC3.24□□□□□ -1.89
LDB1Q86U70 AC131902.3-201ENST00000611767 581 ntBASIC3.24□□□□□ -1.89
LDB1Q86U70 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.24□□□□□ -1.89
LDB1Q86U70 AC006338.1-201ENST00000618453 749 ntBASIC3.24□□□□□ -1.89
LDB1Q86U70 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.24□□□□□ -1.89
LDB1Q86U70 AC091903.1-201ENST00000624322 454 ntBASIC3.24□□□□□ -1.89
LDB1Q86U70 AL390237.1-201ENST00000404226 1415 ntBASIC3.24□□□□□ -1.89
LDB1Q86U70 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.24□□□□□ -1.89
LDB1Q86U70 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LDB1Q86U70 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.24□□□□□ -1.89
LDB1Q86U70 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
LDB1Q86U70 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
LDB1Q86U70 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
LDB1Q86U70 TEX21P-201ENST00000447107 1476 ntBASIC3.23□□□□□ -1.89
LDB1Q86U70 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LDB1Q86U70 GNG5P1-201ENST00000255500 204 ntBASIC3.23□□□□□ -1.89
LDB1Q86U70 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
LDB1Q86U70 SNORA1.3-201ENST00000384676 136 ntBASIC3.23□□□□□ -1.89
LDB1Q86U70 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
LDB1Q86U70 AL513331.1-201ENST00000411908 397 ntBASIC3.23□□□□□ -1.89
LDB1Q86U70 AL451054.2-201ENST00000420896 202 ntBASIC3.23□□□□□ -1.89
LDB1Q86U70 USP9YP29-201ENST00000445112 563 ntBASIC3.23□□□□□ -1.89
LDB1Q86U70 GAPDHP27-201ENST00000447427 1020 ntBASIC3.23□□□□□ -1.89
LDB1Q86U70 AC140076.1-201ENST00000449897 361 ntBASIC3.23□□□□□ -1.89
LDB1Q86U70 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.23□□□□□ -1.89
LDB1Q86U70 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.23□□□□□ -1.89
LDB1Q86U70 MTCO2P29-201ENST00000465212 189 ntBASIC3.23□□□□□ -1.89
LDB1Q86U70 AC034236.1-201ENST00000469891 373 ntBASIC3.23□□□□□ -1.89
LDB1Q86U70 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.23□□□□□ -1.89
LDB1Q86U70 AC010587.1-201ENST00000505809 469 ntBASIC3.23□□□□□ -1.89
LDB1Q86U70 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.23□□□□□ -1.89
LDB1Q86U70 PHBP14-201ENST00000512887 367 ntBASIC3.23□□□□□ -1.89
LDB1Q86U70 RNU1-143P-201ENST00000516296 146 ntBASIC3.23□□□□□ -1.89
LDB1Q86U70 SNORA64.4-201ENST00000516632 81 ntBASIC3.23□□□□□ -1.89
LDB1Q86U70 OR5G4P-201ENST00000525251 760 ntBASIC3.23□□□□□ -1.89
LDB1Q86U70 AC128657.1-201ENST00000549459 145 ntBASIC3.23□□□□□ -1.89
LDB1Q86U70 AC011611.1-201ENST00000552179 197 ntBASIC3.23□□□□□ -1.89
LDB1Q86U70 NCAPGP2-201ENST00000557911 754 ntBASIC3.23□□□□□ -1.89
LDB1Q86U70 AC074050.1-201ENST00000563247 211 ntBASIC3.23□□□□□ -1.89
LDB1Q86U70 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.23□□□□□ -1.89
LDB1Q86U70 AC137800.2-201ENST00000574375 120 ntBASIC3.23□□□□□ -1.89
LDB1Q86U70 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.23□□□□□ -1.89
LDB1Q86U70 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.23□□□□□ -1.89
LDB1Q86U70 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.23□□□□□ -1.89
LDB1Q86U70 AC119751.7-201ENST00000600494 245 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms