Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
NPHP3Q7Z494 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.44□□□□□ -1.86
NPHP3Q7Z494 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.44□□□□□ -1.86
NPHP3Q7Z494 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.44□□□□□ -1.86
NPHP3Q7Z494 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.44□□□□□ -1.86
NPHP3Q7Z494 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.44□□□□□ -1.86
NPHP3Q7Z494 AL390240.1-201ENST00000612950 384 ntBASIC3.44□□□□□ -1.86
NPHP3Q7Z494 AC091152.2-201ENST00000591628 2569 ntBASIC3.43□□□□□ -1.86
NPHP3Q7Z494 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.43□□□□□ -1.86
NPHP3Q7Z494 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NPHP3Q7Z494 AC010733.2-201ENST00000589496 5702 ntBASIC3.43□□□□□ -1.86
NPHP3Q7Z494 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
NPHP3Q7Z494 SNORA4.1-201ENST00000364263 144 ntBASIC3.43□□□□□ -1.86
NPHP3Q7Z494 MIR181B1-201ENST00000385240 110 ntBASIC3.43□□□□□ -1.86
NPHP3Q7Z494 MIR591-201ENST00000385290 95 ntBASIC3.43□□□□□ -1.86
NPHP3Q7Z494 AF228730.1-201ENST00000397972 663 ntBASIC3.43□□□□□ -1.86
NPHP3Q7Z494 AC119751.3-201ENST00000399720 670 ntBASIC3.43□□□□□ -1.86
NPHP3Q7Z494 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.43□□□□□ -1.86
NPHP3Q7Z494 PIGPP2-201ENST00000411569 458 ntBASIC3.43□□□□□ -1.86
NPHP3Q7Z494 VPS26BP1-201ENST00000417155 755 ntBASIC3.43□□□□□ -1.86
NPHP3Q7Z494 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.43□□□□□ -1.86
NPHP3Q7Z494 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.43□□□□□ -1.86
NPHP3Q7Z494 AL008629.1-201ENST00000438615 184 ntBASIC3.43□□□□□ -1.86
NPHP3Q7Z494 MTND1P26-201ENST00000440488 538 ntBASIC3.43□□□□□ -1.86
NPHP3Q7Z494 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.43□□□□□ -1.86
NPHP3Q7Z494 AC096638.1-201ENST00000444678 216 ntBASIC3.43□□□□□ -1.86
NPHP3Q7Z494 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.43□□□□□ -1.86
NPHP3Q7Z494 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.43□□□□□ -1.86
NPHP3Q7Z494 RPL30P9-201ENST00000465586 330 ntBASIC3.43□□□□□ -1.86
NPHP3Q7Z494 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.43□□□□□ -1.86
NPHP3Q7Z494 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
NPHP3Q7Z494 AC147055.4-201ENST00000504399 745 ntBASIC3.43□□□□□ -1.86
NPHP3Q7Z494 SNORA31.8-201ENST00000516327 108 ntBASIC3.43□□□□□ -1.86
NPHP3Q7Z494 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.43□□□□□ -1.86
NPHP3Q7Z494 AC100870.1-201ENST00000522035 505 ntBASIC3.43□□□□□ -1.86
NPHP3Q7Z494 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
NPHP3Q7Z494 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.43□□□□□ -1.86
NPHP3Q7Z494 CYCSP2-201ENST00000558168 301 ntBASIC3.43□□□□□ -1.86
NPHP3Q7Z494 HSPE1P3-201ENST00000559254 309 ntBASIC3.43□□□□□ -1.86
NPHP3Q7Z494 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.43□□□□□ -1.86
NPHP3Q7Z494 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.43□□□□□ -1.86
NPHP3Q7Z494 AC025811.1-201ENST00000604312 472 ntBASIC3.43□□□□□ -1.86
NPHP3Q7Z494 AC112220.3-201ENST00000605502 502 ntBASIC3.43□□□□□ -1.86
NPHP3Q7Z494 VIS1.1-201ENST00000610517 203 ntBASIC3.43□□□□□ -1.86
NPHP3Q7Z494 AL110115.1-201ENST00000614396 364 ntBASIC3.43□□□□□ -1.86
NPHP3Q7Z494 AL136981.2-201ENST00000617319 734 ntBASIC3.43□□□□□ -1.86
NPHP3Q7Z494 AC084035.1-201ENST00000634543 607 ntBASIC3.43□□□□□ -1.86
NPHP3Q7Z494 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.42□□□□□ -1.86
NPHP3Q7Z494 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.42□□□□□ -1.86
NPHP3Q7Z494 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NPHP3Q7Z494 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NPHP3Q7Z494 RNA5SP99-201ENST00000364020 114 ntBASIC3.42□□□□□ -1.86
NPHP3Q7Z494 RNU6-1200P-201ENST00000384162 107 ntBASIC3.42□□□□□ -1.86
NPHP3Q7Z494 AL512633.1-201ENST00000399931 655 ntBASIC3.42□□□□□ -1.86
NPHP3Q7Z494 AC109780.2-201ENST00000413467 845 ntBASIC3.42□□□□□ -1.86
NPHP3Q7Z494 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.42□□□□□ -1.86
NPHP3Q7Z494 AL137014.1-201ENST00000420490 1226 ntBASIC3.42□□□□□ -1.86
NPHP3Q7Z494 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.42□□□□□ -1.86
NPHP3Q7Z494 EEF1E1P1-201ENST00000446998 430 ntBASIC3.42□□□□□ -1.86
NPHP3Q7Z494 Z82190.1-201ENST00000454534 490 ntBASIC3.42□□□□□ -1.86
NPHP3Q7Z494 AL109741.2-201ENST00000455561 343 ntBASIC3.42□□□□□ -1.86
NPHP3Q7Z494 AC004263.1-201ENST00000479327 332 ntBASIC3.42□□□□□ -1.86
NPHP3Q7Z494 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.42□□□□□ -1.86
NPHP3Q7Z494 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.42□□□□□ -1.86
NPHP3Q7Z494 RNU6-150P-201ENST00000516237 95 ntBASIC3.42□□□□□ -1.86
NPHP3Q7Z494 AC128657.1-201ENST00000549459 145 ntBASIC3.42□□□□□ -1.86
NPHP3Q7Z494 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.42□□□□□ -1.86
NPHP3Q7Z494 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.42□□□□□ -1.86
NPHP3Q7Z494 COX6CP3-201ENST00000580869 223 ntBASIC3.42□□□□□ -1.86
NPHP3Q7Z494 AL109653.1-201ENST00000603091 248 ntBASIC3.42□□□□□ -1.86
NPHP3Q7Z494 AC103810.6-201ENST00000606708 136 ntBASIC3.42□□□□□ -1.86
NPHP3Q7Z494 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.42□□□□□ -1.86
NPHP3Q7Z494 AC069234.5-201ENST00000611056 416 ntBASIC3.42□□□□□ -1.86
NPHP3Q7Z494 AC091304.6-201ENST00000619761 202 ntBASIC3.42□□□□□ -1.86
NPHP3Q7Z494 AL353748.2-201ENST00000622148 471 ntBASIC3.42□□□□□ -1.86
NPHP3Q7Z494 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.42□□□□□ -1.86
NPHP3Q7Z494 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.42□□□□□ -1.86
NPHP3Q7Z494 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.42□□□□□ -1.86
NPHP3Q7Z494 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NPHP3Q7Z494 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
NPHP3Q7Z494 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
NPHP3Q7Z494 RNU6-253P-201ENST00000384730 105 ntBASIC3.41□□□□□ -1.86
NPHP3Q7Z494 BTF3P7-201ENST00000407097 488 ntBASIC3.41□□□□□ -1.86
NPHP3Q7Z494 RNA5SP344-201ENST00000411081 104 ntBASIC3.41□□□□□ -1.86
NPHP3Q7Z494 AC107081.1-201ENST00000414975 361 ntBASIC3.41□□□□□ -1.86
NPHP3Q7Z494 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.41□□□□□ -1.86
NPHP3Q7Z494 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.41□□□□□ -1.86
NPHP3Q7Z494 MTCYBP38-201ENST00000417160 1123 ntBASIC3.41□□□□□ -1.86
NPHP3Q7Z494 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.41□□□□□ -1.86
NPHP3Q7Z494 USP9YP20-201ENST00000419224 558 ntBASIC3.41□□□□□ -1.86
NPHP3Q7Z494 RPL7P30-201ENST00000420888 709 ntBASIC3.41□□□□□ -1.86
NPHP3Q7Z494 AC019178.2-201ENST00000423595 505 ntBASIC3.41□□□□□ -1.86
NPHP3Q7Z494 RPL7P34-201ENST00000433316 712 ntBASIC3.41□□□□□ -1.86
NPHP3Q7Z494 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.41□□□□□ -1.86
NPHP3Q7Z494 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.41□□□□□ -1.86
NPHP3Q7Z494 AC097493.1-201ENST00000463958 372 ntBASIC3.41□□□□□ -1.86
NPHP3Q7Z494 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NPHP3Q7Z494 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.41□□□□□ -1.86
NPHP3Q7Z494 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
NPHP3Q7Z494 ELOCP32-201ENST00000548625 324 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms