Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.86□□□□□ -1.79
SYNE3Q6ZMZ3 AC009063.1-201ENST00000563342 702 ntBASIC3.86□□□□□ -1.79
SYNE3Q6ZMZ3 SNORD84-203ENST00000584275 78 ntBASIC3.86□□□□□ -1.79
SYNE3Q6ZMZ3 KC877982.1-201ENST00000602313 470 ntBASIC3.86□□□□□ -1.79
SYNE3Q6ZMZ3 AC007038.2-201ENST00000608095 740 ntBASIC3.86□□□□□ -1.79
SYNE3Q6ZMZ3 AC013562.2-201ENST00000611632 603 ntBASIC3.86□□□□□ -1.79
SYNE3Q6ZMZ3 AC005332.10-201ENST00000612725 619 ntBASIC3.86□□□□□ -1.79
SYNE3Q6ZMZ3 AL450472.3-201ENST00000615578 367 ntBASIC3.86□□□□□ -1.79
SYNE3Q6ZMZ3 AC012314.7-201ENST00000619693 93 ntBASIC3.86□□□□□ -1.79
SYNE3Q6ZMZ3 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.86□□□□□ -1.79
SYNE3Q6ZMZ3 AC095031.1-201ENST00000623685 672 ntBASIC3.86□□□□□ -1.79
SYNE3Q6ZMZ3 AC112204.3-201ENST00000623822 332 ntBASIC3.86□□□□□ -1.79
SYNE3Q6ZMZ3 MIR4275-201ENST00000636486 87 ntBASIC3.86□□□□□ -1.79
SYNE3Q6ZMZ3 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
SYNE3Q6ZMZ3 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SYNE3Q6ZMZ3 AC007256.1-201ENST00000392253 2765 ntBASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 RNU6-223P-201ENST00000362830 107 ntBASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 RNU6-1181P-201ENST00000384191 106 ntBASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 RNU4-65P-201ENST00000410473 140 ntBASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 RNU2-8P-201ENST00000410727 190 ntBASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 C1DP2-201ENST00000418167 426 ntBASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 ZNF885P-201ENST00000420174 1098 ntBASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 AC004866.2-201ENST00000438285 481 ntBASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 AC073614.1-201ENST00000438690 650 ntBASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 HMGB3P11-201ENST00000440127 604 ntBASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 AC005094.1-201ENST00000440420 368 ntBASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 Z99127.3-201ENST00000448158 395 ntBASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 AC234775.1-201ENST00000454247 670 ntBASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 AC108059.3-201ENST00000456388 214 ntBASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 RN7SL442P-201ENST00000473804 320 ntBASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 MTND1P3-201ENST00000484956 952 ntBASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 RPL32P34-201ENST00000486380 400 ntBASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 RPL21P13-201ENST00000488305 481 ntBASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 AC135721.1-201ENST00000497954 479 ntBASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 AC105252.1-201ENST00000503089 286 ntBASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 KCTD9P5-201ENST00000504141 1170 ntBASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 RPL37P25-201ENST00000507308 276 ntBASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 NDUFB4P2-201ENST00000509515 391 ntBASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 AC100870.1-201ENST00000522035 505 ntBASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 DEFB108D-201ENST00000527787 222 ntBASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 AC022880.1-201ENST00000534017 973 ntBASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 HIGD1AP1-201ENST00000550979 275 ntBASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 AC010546.1-201ENST00000569391 485 ntBASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 MTND1P15-201ENST00000579262 949 ntBASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 MIR92B-201ENST00000607575 96 ntBASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 AC245517.5-201ENST00000611529 162 ntBASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 AC091834.1-201ENST00000614543 472 ntBASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 AC084757.4-201ENST00000616350 526 ntBASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 MIR7975-201ENST00000619350 68 ntBASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 AC099842.1-201ENST00000619919 596 ntBASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 AC084035.1-201ENST00000634543 607 ntBASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SYNE3Q6ZMZ3 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.84□□□□□ -1.79
SYNE3Q6ZMZ3 RNA5SP72-201ENST00000364442 117 ntBASIC3.84□□□□□ -1.79
SYNE3Q6ZMZ3 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
SYNE3Q6ZMZ3 AL109755.1-201ENST00000401791 649 ntBASIC3.84□□□□□ -1.79
SYNE3Q6ZMZ3 AC079780.1-201ENST00000428259 207 ntBASIC3.84□□□□□ -1.79
SYNE3Q6ZMZ3 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.84□□□□□ -1.79
SYNE3Q6ZMZ3 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.84□□□□□ -1.79
SYNE3Q6ZMZ3 MTND1P34-201ENST00000438556 671 ntBASIC3.84□□□□□ -1.79
SYNE3Q6ZMZ3 ATP5C1P1-201ENST00000441945 895 ntBASIC3.84□□□□□ -1.79
SYNE3Q6ZMZ3 AL358232.1-201ENST00000448030 501 ntBASIC3.84□□□□□ -1.79
SYNE3Q6ZMZ3 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.84□□□□□ -1.79
SYNE3Q6ZMZ3 AL359385.1-201ENST00000456509 365 ntBASIC3.84□□□□□ -1.79
SYNE3Q6ZMZ3 PHBP14-201ENST00000512887 367 ntBASIC3.84□□□□□ -1.79
SYNE3Q6ZMZ3 SNORA31.22-201ENST00000517204 135 ntBASIC3.84□□□□□ -1.79
SYNE3Q6ZMZ3 DEFB108A-201ENST00000530110 222 ntBASIC3.84□□□□□ -1.79
SYNE3Q6ZMZ3 AL133271.1-201ENST00000538229 291 ntBASIC3.84□□□□□ -1.79
SYNE3Q6ZMZ3 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.84□□□□□ -1.79
SYNE3Q6ZMZ3 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.84□□□□□ -1.79
SYNE3Q6ZMZ3 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.84□□□□□ -1.79
SYNE3Q6ZMZ3 MIR3913-1-201ENST00000577744 102 ntBASIC3.84□□□□□ -1.79
SYNE3Q6ZMZ3 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 150.8 ms