Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 AC011460.1-201ENST00000636268 1834 ntBASIC4.65□□□□□ -1.67
CNKSR3Q6P9H4 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
CNKSR3Q6P9H4 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.67
CNKSR3Q6P9H4 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CNKSR3Q6P9H4 CDC27P3-201ENST00000635418 1910 ntBASIC4.64□□□□□ -1.67
CNKSR3Q6P9H4 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CNKSR3Q6P9H4 AL161912.2-201ENST00000565707 3007 ntBASIC4.64□□□□□ -1.67
CNKSR3Q6P9H4 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CNKSR3Q6P9H4 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CNKSR3Q6P9H4 RNU6-238P-201ENST00000363313 106 ntBASIC4.64□□□□□ -1.67
CNKSR3Q6P9H4 RNU1-20P-201ENST00000363314 162 ntBASIC4.64□□□□□ -1.67
CNKSR3Q6P9H4 Y_RNA.212-201ENST00000364177 102 ntBASIC4.64□□□□□ -1.67
CNKSR3Q6P9H4 Y_RNA.307-201ENST00000365022 117 ntBASIC4.64□□□□□ -1.67
CNKSR3Q6P9H4 RNU6-601P-201ENST00000384540 107 ntBASIC4.64□□□□□ -1.67
CNKSR3Q6P9H4 RNU11-4P-201ENST00000391149 133 ntBASIC4.64□□□□□ -1.67
CNKSR3Q6P9H4 SOD2P1-201ENST00000396543 562 ntBASIC4.64□□□□□ -1.67
CNKSR3Q6P9H4 RNU2-36P-201ENST00000410361 191 ntBASIC4.64□□□□□ -1.67
CNKSR3Q6P9H4 SNORA74C-2-201ENST00000411179 201 ntBASIC4.64□□□□□ -1.67
CNKSR3Q6P9H4 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC4.64□□□□□ -1.67
CNKSR3Q6P9H4 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.64□□□□□ -1.67
CNKSR3Q6P9H4 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.64□□□□□ -1.67
CNKSR3Q6P9H4 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC4.64□□□□□ -1.67
CNKSR3Q6P9H4 AC128713.1-201ENST00000471495 306 ntBASIC4.64□□□□□ -1.67
CNKSR3Q6P9H4 AL136126.1-201ENST00000473603 402 ntBASIC4.64□□□□□ -1.67
CNKSR3Q6P9H4 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC4.64□□□□□ -1.67
CNKSR3Q6P9H4 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.64□□□□□ -1.67
CNKSR3Q6P9H4 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
CNKSR3Q6P9H4 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.64□□□□□ -1.67
CNKSR3Q6P9H4 AC138761.3-201ENST00000579993 334 ntBASIC4.64□□□□□ -1.67
CNKSR3Q6P9H4 AC018889.1-201ENST00000605372 397 ntBASIC4.64□□□□□ -1.67
CNKSR3Q6P9H4 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.64□□□□□ -1.67
CNKSR3Q6P9H4 AC133104.2-201ENST00000615272 193 ntBASIC4.64□□□□□ -1.67
CNKSR3Q6P9H4 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.64□□□□□ -1.67
CNKSR3Q6P9H4 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CNKSR3Q6P9H4 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CNKSR3Q6P9H4 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CNKSR3Q6P9H4 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CNKSR3Q6P9H4 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CNKSR3Q6P9H4 AC097714.1-201ENST00000511272 1647 ntBASIC4.64□□□□□ -1.67
CNKSR3Q6P9H4 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CNKSR3Q6P9H4 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CNKSR3Q6P9H4 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CNKSR3Q6P9H4 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CNKSR3Q6P9H4 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CNKSR3Q6P9H4 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CNKSR3Q6P9H4 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CNKSR3Q6P9H4 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CNKSR3Q6P9H4 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CNKSR3Q6P9H4 RNA5SP307-201ENST00000362863 116 ntBASIC4.63□□□□□ -1.67
CNKSR3Q6P9H4 RNU1-83P-201ENST00000363426 164 ntBASIC4.63□□□□□ -1.67
CNKSR3Q6P9H4 RNU5A-8P-201ENST00000364102 114 ntBASIC4.63□□□□□ -1.67
CNKSR3Q6P9H4 U3.11-201ENST00000364476 212 ntBASIC4.63□□□□□ -1.67
CNKSR3Q6P9H4 Y_RNA.252-201ENST00000364556 101 ntBASIC4.63□□□□□ -1.67
CNKSR3Q6P9H4 RNU6-890P-201ENST00000384121 107 ntBASIC4.63□□□□□ -1.67
CNKSR3Q6P9H4 MIR200C-201ENST00000384980 68 ntBASIC4.63□□□□□ -1.67
CNKSR3Q6P9H4 U3.20-201ENST00000390909 217 ntBASIC4.63□□□□□ -1.67
CNKSR3Q6P9H4 AL592291.1-201ENST00000403830 352 ntBASIC4.63□□□□□ -1.67
CNKSR3Q6P9H4 RNU4-6P-201ENST00000410804 122 ntBASIC4.63□□□□□ -1.67
CNKSR3Q6P9H4 AL139396.1-201ENST00000421137 167 ntBASIC4.63□□□□□ -1.67
CNKSR3Q6P9H4 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CNKSR3Q6P9H4 RAC1P6-201ENST00000423911 575 ntBASIC4.63□□□□□ -1.67
CNKSR3Q6P9H4 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC4.63□□□□□ -1.67
CNKSR3Q6P9H4 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.63□□□□□ -1.67
CNKSR3Q6P9H4 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC4.63□□□□□ -1.67
CNKSR3Q6P9H4 AC108734.1-201ENST00000439549 399 ntBASIC4.63□□□□□ -1.67
CNKSR3Q6P9H4 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.63□□□□□ -1.67
CNKSR3Q6P9H4 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.63□□□□□ -1.67
CNKSR3Q6P9H4 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CNKSR3Q6P9H4 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CNKSR3Q6P9H4 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.63□□□□□ -1.67
CNKSR3Q6P9H4 SNRPFP3-201ENST00000457792 225 ntBASIC4.63□□□□□ -1.67
CNKSR3Q6P9H4 RNA5SP246-201ENST00000458909 119 ntBASIC4.63□□□□□ -1.67
CNKSR3Q6P9H4 RPL23AP2-201ENST00000471227 466 ntBASIC4.63□□□□□ -1.67
CNKSR3Q6P9H4 AC104564.1-201ENST00000493028 407 ntBASIC4.63□□□□□ -1.67
CNKSR3Q6P9H4 Y_RNA.668-201ENST00000516233 93 ntBASIC4.63□□□□□ -1.67
CNKSR3Q6P9H4 RNA5SP503-201ENST00000517047 117 ntBASIC4.63□□□□□ -1.67
CNKSR3Q6P9H4 AC087854.1-201ENST00000519706 414 ntBASIC4.63□□□□□ -1.67
CNKSR3Q6P9H4 HMGB1P41-201ENST00000520234 440 ntBASIC4.63□□□□□ -1.67
CNKSR3Q6P9H4 AC113195.1-201ENST00000579952 141 ntBASIC4.63□□□□□ -1.67
CNKSR3Q6P9H4 AC023043.2-201ENST00000589678 1026 ntBASIC4.63□□□□□ -1.67
CNKSR3Q6P9H4 BNIP3P16-201ENST00000589779 534 ntBASIC4.63□□□□□ -1.67
CNKSR3Q6P9H4 AC008739.3-201ENST00000603262 127 ntBASIC4.63□□□□□ -1.67
CNKSR3Q6P9H4 AC006157.1-201ENST00000611750 366 ntBASIC4.63□□□□□ -1.67
CNKSR3Q6P9H4 AC244100.1-202ENST00000621554 382 ntBASIC4.63□□□□□ -1.67
CNKSR3Q6P9H4 AC039056.2-201ENST00000622261 511 ntBASIC4.63□□□□□ -1.67
CNKSR3Q6P9H4 AC011155.2-201ENST00000623202 216 ntBASIC4.63□□□□□ -1.67
CNKSR3Q6P9H4 CYP3A51P-201ENST00000633513 256 ntBASIC4.63□□□□□ -1.67
CNKSR3Q6P9H4 AL732372.2-225ENST00000642124 456 ntBASIC4.63□□□□□ -1.67
CNKSR3Q6P9H4 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
CNKSR3Q6P9H4 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CNKSR3Q6P9H4 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
CNKSR3Q6P9H4 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
CNKSR3Q6P9H4 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CNKSR3Q6P9H4 AC009902.3-201ENST00000606235 2172 ntBASIC4.63□□□□□ -1.67
CNKSR3Q6P9H4 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.63□□□□□ -1.67
CNKSR3Q6P9H4 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
CNKSR3Q6P9H4 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.62□□□□□ -1.67
CNKSR3Q6P9H4 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.62□□□□□ -1.67
CNKSR3Q6P9H4 KPNA2P1-201ENST00000458289 1591 ntBASIC4.62□□□□□ -1.67
CNKSR3Q6P9H4 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms